RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 INO80Q9ULG1 1556 aaPredicted RBP17.63■□□□□ 0.41
USF1-203ENST00000368021 DUOX2Q9NRD8 1548 aa17.62■□□□□ 0.41
USF1-203ENST00000368021 TRIM52Q96A61 297 aa17.62■□□□□ 0.41
USF1-203ENST00000368021 A2MP01023 1474 aa17.6■□□□□ 0.41
USF1-203ENST00000368021 BCORL1Q5H9F3 1711 aa17.6■□□□□ 0.41
USF1-203ENST00000368021 ERBINQ96RT1 1412 aa17.6■□□□□ 0.41
USF1-203ENST00000368021 GGT6Q6P531 493 aa17.59■□□□□ 0.41
USF1-203ENST00000368021 MPHOSPH9Q99550 1183 aa17.58■□□□□ 0.41
USF1-203ENST00000368021 KDM5DQ9BY66 1539 aa17.58■□□□□ 0.41
USF1-203ENST00000368021 KIF3BO15066 747 aa17.57■□□□□ 0.4
USF1-203ENST00000368021 ADAMTSL3P82987 1691 aa17.57■□□□□ 0.4
USF1-203ENST00000368021 MADDQ8WXG6 1647 aa17.56■□□□□ 0.4
USF1-203ENST00000368021 DHX29Q7Z478 1369 aaKnown RBP17.56■□□□□ 0.4
USF1-203ENST00000368021 PZPP20742 1482 aa17.56■□□□□ 0.4
USF1-203ENST00000368021 REREQ9P2R6 1566 aa17.55■□□□□ 0.4
USF1-203ENST00000368021 ESF1Q9H501 851 aaKnown RBP17.55■□□□□ 0.4
USF1-203ENST00000368021 UNC13BO14795 1591 aa17.54■□□□□ 0.4
USF1-203ENST00000368021 TIMELESSQ9UNS1 1208 aa17.54■□□□□ 0.4
USF1-203ENST00000368021 AGLP35573 1532 aa17.53■□□□□ 0.4
USF1-203ENST00000368021 CEBPAP49715 358 aaPredicted RBP17.53■□□□□ 0.4
USF1-203ENST00000368021 SLC4A1APQ9BWU0 796 aaKnown RBP17.53■□□□□ 0.4
USF1-203ENST00000368021 PTPRMP28827 1452 aa17.53■□□□□ 0.4
USF1-203ENST00000368021 NUP155O75694 1391 aa17.52■□□□□ 0.4
USF1-203ENST00000368021 RIMS1Q86UR5 1692 aaKnown RBP17.51■□□□□ 0.39
USF1-203ENST00000368021 SIN3AQ96ST3 1273 aa17.49■□□□□ 0.39
USF1-203ENST00000368021 FER1L4A9Z1Z3 1794 aa17.49■□□□□ 0.39
USF1-203ENST00000368021 EIF2AK4Q9P2K8 1649 aaKnown RBP17.49■□□□□ 0.39
USF1-203ENST00000368021 ANKRD30BQ9BXX2 1392 aa17.48■□□□□ 0.39
USF1-203ENST00000368021 FAM135AQ9P2D6 1515 aa17.48■□□□□ 0.39
USF1-203ENST00000368021 IQGAP3Q86VI3 1631 aa17.46■□□□□ 0.39
USF1-203ENST00000368021 DEPDC5O75140 1603 aa17.46■□□□□ 0.39
USF1-203ENST00000368021 NEUROD1Q13562 356 aa17.45■□□□□ 0.38
USF1-203ENST00000368021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.45■□□□□ 0.38
USF1-203ENST00000368021 WASHC2CQ9Y4E1 1318 aa17.45■□□□□ 0.38
USF1-203ENST00000368021 PKD2Q13563 968 aa17.44■□□□□ 0.38
USF1-203ENST00000368021 FOXD1Q16676 465 aa17.42■□□□□ 0.38
USF1-203ENST00000368021 ZMYM3Q14202 1370 aa17.42■□□□□ 0.38
USF1-203ENST00000368021 RPRD2Q5VT52 1461 aaKnown RBP17.41■□□□□ 0.38
USF1-203ENST00000368021 TONSLQ96HA7 1378 aa17.41■□□□□ 0.38
USF1-203ENST00000368021 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
USF1-203ENST00000368021 PRDM15P57071 1507 aaPredicted RBP17.4■□□□□ 0.38
USF1-203ENST00000368021 CNTLNQ9NXG0 1405 aa17.4■□□□□ 0.38
USF1-203ENST00000368021 VWDEQ8N2E2 1590 aa17.39■□□□□ 0.37
USF1-203ENST00000368021 CLTCQ00610 1675 aaKnown RBP17.39■□□□□ 0.37
USF1-203ENST00000368021 RNF17Q9BXT8 1623 aaKnown RBP17.38■□□□□ 0.37
USF1-203ENST00000368021 MROH1Q8NDA8 1641 aa17.37■□□□□ 0.37
USF1-203ENST00000368021 KANK1Q14678 1352 aa17.37■□□□□ 0.37
USF1-203ENST00000368021 C3P01024 1663 aa17.36■□□□□ 0.37
USF1-203ENST00000368021 FBXO31Q5XUX0 539 aaPredicted RBP17.35■□□□□ 0.37
USF1-203ENST00000368021 PPP1R15AO75807 674 aaPredicted RBP17.35■□□□□ 0.37
USF1-203ENST00000368021 TET3O43151 1660 aa17.34■□□□□ 0.37
USF1-203ENST00000368021 HSPA2P54652 639 aa17.33■□□□□ 0.37
USF1-203ENST00000368021 LMTK2Q8IWU2 1503 aa17.32■□□□□ 0.36
USF1-203ENST00000368021 ABCC3O15438 1527 aa17.3■□□□□ 0.36
USF1-203ENST00000368021 MROH2AA6NES4 1674 aa17.3■□□□□ 0.36
USF1-203ENST00000368021 E9PCH4 1651 aa17.29■□□□□ 0.36
USF1-203ENST00000368021 PLA2R1Q13018 1463 aa17.29■□□□□ 0.36
USF1-203ENST00000368021 LMTK3Q96Q04 1460 aa17.28■□□□□ 0.36
USF1-203ENST00000368021 CEP152O94986 1710 aa17.28■□□□□ 0.36
USF1-203ENST00000368021 CCDC144AA2RUR9 1427 aa17.28■□□□□ 0.36
USF1-203ENST00000368021 L3MBTL2Q969R5 705 aa17.27■□□□□ 0.36
USF1-203ENST00000368021 EFCAB6Q5THR3 1501 aa17.27■□□□□ 0.35
USF1-203ENST00000368021 SETD1BQ9UPS6 1966 aaKnown RBP17.26■□□□□ 0.35
USF1-203ENST00000368021 CFAP65Q6ZU64 1925 aaKnown RBP17.26■□□□□ 0.35
USF1-203ENST00000368021 PTPRTO14522 1441 aa17.26■□□□□ 0.35
USF1-203ENST00000368021 UHRF1BP1Q6BDS2 1440 aa17.26■□□□□ 0.35
USF1-203ENST00000368021 ZNF316A6NFI3 1004 aaPredicted RBP17.26■□□□□ 0.35
USF1-203ENST00000368021 NPATQ14207 1427 aa17.25■□□□□ 0.35
USF1-203ENST00000368021 TRPM2O94759 1503 aa17.24■□□□□ 0.35
USF1-203ENST00000368021 SPHKAPQ2M3C7 1700 aa17.24■□□□□ 0.35
USF1-203ENST00000368021 ZC3H13Q5T200 1668 aaKnown RBP17.23■□□□□ 0.35
USF1-203ENST00000368021 TNRQ92752 1358 aa17.23■□□□□ 0.35
USF1-203ENST00000368021 CAMSAP1Q5T5Y3 1602 aa17.22■□□□□ 0.35
USF1-203ENST00000368021 PREX1Q8TCU6 1659 aa17.22■□□□□ 0.35
USF1-203ENST00000368021 ARHGAP31Q2M1Z3 1444 aa17.18■□□□□ 0.34
USF1-203ENST00000368021 ERVK-7P63135 1459 aa17.17■□□□□ 0.34
USF1-203ENST00000368021 MYO3AQ8NEV4 1616 aa17.16■□□□□ 0.34
USF1-203ENST00000368021 NEURL4Q96JN8 1562 aa17.16■□□□□ 0.34
USF1-203ENST00000368021 CLTCL1P53675 1640 aa17.15■□□□□ 0.34
USF1-203ENST00000368021 SPATA31E1Q6ZUB1 1445 aa17.15■□□□□ 0.34
USF1-203ENST00000368021 SPATA31D1Q6ZQQ2 1576 aa17.14■□□□□ 0.33
USF1-203ENST00000368021 CEP170BQ9Y4F5 1589 aaPredicted RBP17.14■□□□□ 0.33
USF1-203ENST00000368021 IDI1Q13907 227 aa17.13■□□□□ 0.33
USF1-203ENST00000368021 STAG3Q9UJ98 1225 aa17.12■□□□□ 0.33
USF1-203ENST00000368021 A2ML1A8K2U0 1454 aa17.12■□□□□ 0.33
USF1-203ENST00000368021 NBPF8Q3BBV2 869 aa17.12■□□□□ 0.33
USF1-203ENST00000368021 NOS1P29475 1434 aa17.12■□□□□ 0.33
USF1-203ENST00000368021 NCKAP5LQ9HCH0 1330 aa17.11■□□□□ 0.33
USF1-203ENST00000368021 NLRP1Q9C000 1473 aa17.11■□□□□ 0.33
USF1-203ENST00000368021 THEMISQ8N1K5 641 aaPredicted RBP17.1■□□□□ 0.33
USF1-203ENST00000368021 DCAF11Q8TEB1 546 aa17.1■□□□□ 0.33
USF1-203ENST00000368021 STAC3Q96MF2 364 aa17.1■□□□□ 0.33
USF1-203ENST00000368021 UGGT1Q9NYU2 1555 aa17.09■□□□□ 0.33
USF1-203ENST00000368021 KIF1BO60333 1816 aa17.08■□□□□ 0.32
USF1-203ENST00000368021 CHGAP10645 457 aaKnown RBP17.07■□□□□ 0.32
USF1-203ENST00000368021 RGL3Q3MIN7 710 aa17.07■□□□□ 0.32
USF1-203ENST00000368021 SLC52A1Q9NWF4 448 aa17.07■□□□□ 0.32
USF1-203ENST00000368021 ZNF142P52746 1687 aaPredicted RBP17.07■□□□□ 0.32
USF1-203ENST00000368021 SYNMO15061 1565 aa17.07■□□□□ 0.32
USF1-203ENST00000368021 RALGAPBQ86X10 1494 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms