RNA–Protein interactions for RNA: ENST00000361204.8

SREBF2-201, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SREBF2, Length 5,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-201ENST00000361204 BCL2L13Q9BXK5 485 aa22.27■■□□□ 1.16
SREBF2-201ENST00000361204 HMMRO75330 724 aa22.27■■□□□ 1.16
SREBF2-201ENST00000361204 KIF7Q2M1P5 1343 aa22.26■■□□□ 1.15
SREBF2-201ENST00000361204 RRP7AQ9Y3A4 280 aaKnown RBP22.26■■□□□ 1.15
SREBF2-201ENST00000361204 PAK3O75914 559 aaPredicted RBP22.26■■□□□ 1.15
SREBF2-201ENST00000361204 STK26Q9P289 416 aa22.25■■□□□ 1.15
SREBF2-201ENST00000361204 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
SREBF2-201ENST00000361204 SOX12O15370 315 aa22.25■■□□□ 1.15
SREBF2-201ENST00000361204 CSPP1Q1MSJ5 1256 aa22.25■■□□□ 1.15
SREBF2-201ENST00000361204 ZKSCAN2Q63HK3 967 aa22.24■■□□□ 1.15
SREBF2-201ENST00000361204 NOL8Q76FK4 1167 aaKnown RBP22.23■■□□□ 1.15
SREBF2-201ENST00000361204 WASHC2AQ641Q2 1341 aa22.23■■□□□ 1.15
SREBF2-201ENST00000361204 TRIM6-TRIM34B2RNG4 842 aa22.23■■□□□ 1.15
SREBF2-201ENST00000361204 APAF1O14727 1248 aa22.23■■□□□ 1.15
SREBF2-201ENST00000361204 IL27Q8NEV9 243 aa22.22■■□□□ 1.15
SREBF2-201ENST00000361204 TNNT3P45378 269 aaPredicted RBP22.22■■□□□ 1.15
SREBF2-201ENST00000361204 FOXD4L5Q5VV16 416 aaPredicted RBP22.22■■□□□ 1.15
SREBF2-201ENST00000361204 FOXD4L4Q8WXT5 416 aaPredicted RBP22.22■■□□□ 1.15
SREBF2-201ENST00000361204 ANO8Q9HCE9 1232 aaPredicted RBP22.21■■□□□ 1.15
SREBF2-201ENST00000361204 BRPF3Q9ULD4 1205 aa22.21■■□□□ 1.15
SREBF2-201ENST00000361204 FAM43AQ8N2R8 423 aa22.19■■□□□ 1.14
SREBF2-201ENST00000361204 ANKRD45Q5TZF3 282 aa22.19■■□□□ 1.14
SREBF2-201ENST00000361204 CARMIL2Q6F5E8 1435 aa22.18■■□□□ 1.14
SREBF2-201ENST00000361204 UACAQ9BZF9 1416 aa22.18■■□□□ 1.14
SREBF2-201ENST00000361204 HNRNPMP52272 730 aaKnown RBP eCLIP22.18■■□□□ 1.142e-7■■□□□ 12
SREBF2-201ENST00000361204 NGEFQ8N5V2 710 aa22.17■■□□□ 1.14
SREBF2-201ENST00000361204 ERCC6Q03468 1493 aa22.17■■□□□ 1.14
SREBF2-201ENST00000361204 CCDC144AA2RUR9 1427 aa22.17■■□□□ 1.14
SREBF2-201ENST00000361204 STK31Q9BXU1 1019 aa22.17■■□□□ 1.14
SREBF2-201ENST00000361204 GGT6Q6P531 493 aa22.16■■□□□ 1.14
SREBF2-201ENST00000361204 FAM13BQ9NYF5 915 aa22.16■■□□□ 1.14
SREBF2-201ENST00000361204 KIF21BO75037 1637 aa22.15■■□□□ 1.14
SREBF2-201ENST00000361204 GNL2Q13823 731 aaKnown RBP22.15■■□□□ 1.14
SREBF2-201ENST00000361204 RSPH4AQ5TD94 716 aa22.15■■□□□ 1.14
SREBF2-201ENST00000361204 LMOD2Q6P5Q4 547 aa22.15■■□□□ 1.14
SREBF2-201ENST00000361204 TERF2IPQ9NYB0 399 aa22.15■■□□□ 1.14
SREBF2-201ENST00000361204 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.14■■□□□ 1.14
SREBF2-201ENST00000361204 TPM4P67936 248 aa22.14■■□□□ 1.13
SREBF2-201ENST00000361204 MRE11P49959 708 aa22.14■■□□□ 1.13
SREBF2-201ENST00000361204 EFCAB2Q5VUJ9 269 aa22.13■■□□□ 1.13
SREBF2-201ENST00000361204 SLC4A10Q6U841 1118 aa22.12■■□□□ 1.13
SREBF2-201ENST00000361204 DDX19BQ9UMR2 479 aa22.12■■□□□ 1.13
SREBF2-201ENST00000361204 LMOD3Q0VAK6 560 aa22.12■■□□□ 1.13
SREBF2-201ENST00000361204 FRAT2O75474 233 aaPredicted RBP22.11■■□□□ 1.13
SREBF2-201ENST00000361204 FGD6Q6ZV73 1430 aa22.1■■□□□ 1.13
SREBF2-201ENST00000361204 BRD4O60885 1362 aaPredicted RBP22.1■■□□□ 1.13
SREBF2-201ENST00000361204 SPAG9O60271 1321 aaKnown RBP22.1■■□□□ 1.13
SREBF2-201ENST00000361204 KIF16BQ96L93 1317 aa22.1■■□□□ 1.13
SREBF2-201ENST00000361204 C22orf23Q9BZE7 217 aa22.09■■□□□ 1.13
SREBF2-201ENST00000361204 BACH2Q9BYV9 841 aa22.09■■□□□ 1.13
SREBF2-201ENST00000361204 DZIP1LQ8IYY4 767 aaKnown RBP22.08■■□□□ 1.13
SREBF2-201ENST00000361204 ATP6V1DQ9Y5K8 247 aa22.08■■□□□ 1.13
SREBF2-201ENST00000361204 GPATCH3Q96I76 525 aa22.07■■□□□ 1.12
SREBF2-201ENST00000361204 FOXD4L6Q3SYB3 417 aaPredicted RBP22.06■■□□□ 1.12
SREBF2-201ENST00000361204 FOXD4L3Q6VB84 417 aaPredicted RBP22.06■■□□□ 1.12
SREBF2-201ENST00000361204 CHMP4AQ9BY43 222 aa22.06■■□□□ 1.12
SREBF2-201ENST00000361204 RRBP1Q9P2E9 1410 aaKnown RBP22.06■■□□□ 1.12
SREBF2-201ENST00000361204 HDGFP51858 240 aaKnown RBP22.06■■□□□ 1.12
SREBF2-201ENST00000361204 MSH5O43196 834 aa22.05■■□□□ 1.12
SREBF2-201ENST00000361204 AKNAQ7Z591 1439 aa22.05■■□□□ 1.12
SREBF2-201ENST00000361204 KIF3BO15066 747 aa22.05■■□□□ 1.12
SREBF2-201ENST00000361204 ELL2O00472 640 aaPredicted RBP22.05■■□□□ 1.12
SREBF2-201ENST00000361204 AAMPQ13685 434 aa22.05■■□□□ 1.12
SREBF2-201ENST00000361204 CDCA7LQ96GN5 454 aa22.04■■□□□ 1.12
SREBF2-201ENST00000361204 REC8O95072 547 aa22.04■■□□□ 1.12
SREBF2-201ENST00000361204 TRAK1Q9UPV9 953 aa22.04■■□□□ 1.12
SREBF2-201ENST00000361204 HSP90B1P14625 803 aaKnown RBP22.03■■□□□ 1.12
SREBF2-201ENST00000361204 NUCB2P80303 420 aa22.03■■□□□ 1.12
SREBF2-201ENST00000361204 TRAK2O60296 914 aa22.03■■□□□ 1.12
SREBF2-201ENST00000361204 LRRC9Q6ZRR7 1453 aa22.03■■□□□ 1.12
SREBF2-201ENST00000361204 HDAC5Q9UQL6 1122 aa22.03■■□□□ 1.12
SREBF2-201ENST00000361204 TULP1O00294 542 aaPredicted RBP22.02■■□□□ 1.12
SREBF2-201ENST00000361204 SMARCA4P51532 1647 aa22.01■■□□□ 1.11
SREBF2-201ENST00000361204 RILPL2Q969X0 211 aa22.01■■□□□ 1.11
SREBF2-201ENST00000361204 PANK1Q8TE04 598 aa22■■□□□ 1.11
SREBF2-201ENST00000361204 MYOM3Q5VTT5 1437 aa22■■□□□ 1.11
SREBF2-201ENST00000361204 GOLGA6L1Q8N7Z2 621 aa22■■□□□ 1.11
SREBF2-201ENST00000361204 CADPSQ9ULU8 1353 aa22■■□□□ 1.11
SREBF2-201ENST00000361204 NASPP49321 788 aaPredicted RBP21.99■■□□□ 1.11
SREBF2-201ENST00000361204 ZNF771Q7L3S4 317 aaPredicted RBP21.98■■□□□ 1.11
SREBF2-201ENST00000361204 GOLGA6L19H0YKK7 550 aa21.98■■□□□ 1.11
SREBF2-201ENST00000361204 KIF3AQ9Y496 699 aa21.98■■□□□ 1.11
SREBF2-201ENST00000361204 MAP7D2Q96T17 732 aa21.97■■□□□ 1.11
SREBF2-201ENST00000361204 ADAMTS8Q9UP79 889 aa21.97■■□□□ 1.11
SREBF2-201ENST00000361204 ATAD2BQ9ULI0 1458 aa21.97■■□□□ 1.11
SREBF2-201ENST00000361204 MCTP1Q6DN14 999 aa21.97■■□□□ 1.11
SREBF2-201ENST00000361204 LNPKQ9C0E8 428 aa21.97■■□□□ 1.11
SREBF2-201ENST00000361204 SMG6Q86US8 1419 aaKnown RBP21.96■■□□□ 1.11
SREBF2-201ENST00000361204 CCDC34Q96HJ3 373 aa21.96■■□□□ 1.11
SREBF2-201ENST00000361204 R3HCC1Q9Y3T6 440 aaKnown RBP21.96■■□□□ 1.11
SREBF2-201ENST00000361204 RUNDC1Q96C34 613 aa21.95■■□□□ 1.11
SREBF2-201ENST00000361204 BECN2A8MW95 431 aa21.95■■□□□ 1.1
SREBF2-201ENST00000361204 MIA2Q96PC5 1412 aa21.95■■□□□ 1.1
SREBF2-201ENST00000361204 PDS5BQ9NTI5 1447 aa21.95■■□□□ 1.1
SREBF2-201ENST00000361204 IGF1RP08069 1367 aa21.95■■□□□ 1.1
SREBF2-201ENST00000361204 TPM2P07951 284 aa21.94■■□□□ 1.1
SREBF2-201ENST00000361204 MTERF4Q7Z6M4 381 aaKnown RBP21.94■■□□□ 1.1
SREBF2-201ENST00000361204 SF3A1Q15459 793 aaKnown RBP21.93■■□□□ 1.1
SREBF2-201ENST00000361204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.93■■□□□ 1.14e-7■■□□□ 12
SREBF2-201ENST00000361204 PNISRQ8TF01 805 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms