RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 KLHL34Q8N239 644 aa21.49■■□□□ 1.03
COL4A2-201ENST00000360467 SYTL4Q96C24 671 aaPredicted RBP21.48■■□□□ 1.03
COL4A2-201ENST00000360467 CHAF1AQ13111 956 aaPredicted RBP21.48■■□□□ 1.03
COL4A2-201ENST00000360467 KIAA2012Q0VF49 1180 aa21.47■■□□□ 1.03
COL4A2-201ENST00000360467 RAD21O60216 631 aa21.47■■□□□ 1.03
COL4A2-201ENST00000360467 MROH2BQ7Z745 1585 aa21.46■■□□□ 1.03
COL4A2-201ENST00000360467 NECTIN2Q92692 538 aa21.46■■□□□ 1.03
COL4A2-201ENST00000360467 RALBP1Q15311 655 aa21.44■■□□□ 1.02
COL4A2-201ENST00000360467 NOC3LQ8WTT2 800 aaKnown RBP21.44■■□□□ 1.02
COL4A2-201ENST00000360467 FBXW7Q969H0 707 aa21.43■■□□□ 1.02
COL4A2-201ENST00000360467 VPS8Q8N3P4 1428 aa21.43■■□□□ 1.02
COL4A2-201ENST00000360467 C1orf141Q5JVX7 400 aa21.42■■□□□ 1.02
COL4A2-201ENST00000360467 L3MBTL2Q969R5 705 aa21.42■■□□□ 1.02
COL4A2-201ENST00000360467 BCL2L13Q9BXK5 485 aa21.42■■□□□ 1.02
COL4A2-201ENST00000360467 FMN1Q68DA7 1419 aa21.42■■□□□ 1.02
COL4A2-201ENST00000360467 MINK1Q8N4C8 1332 aaPredicted RBP21.42■■□□□ 1.02
COL4A2-201ENST00000360467 MARCH6O60337 910 aa21.4■■□□□ 1.02
COL4A2-201ENST00000360467 EIF2S2P20042 333 aaKnown RBP21.4■■□□□ 1.02
COL4A2-201ENST00000360467 JPH4Q96JJ6 628 aa21.4■■□□□ 1.02
COL4A2-201ENST00000360467 CCER2I3L3R5 266 aa21.39■■□□□ 1.01
COL4A2-201ENST00000360467 CFAP44Q96MT7 982 aa21.38■■□□□ 1.01
COL4A2-201ENST00000360467 PHF23Q9BUL5 403 aaPredicted RBP21.38■■□□□ 1.01
COL4A2-201ENST00000360467 SMARCA2P51531 1590 aa21.38■■□□□ 1.01
COL4A2-201ENST00000360467 RILPL2Q969X0 211 aa21.37■■□□□ 1.01
COL4A2-201ENST00000360467 PMFBP1Q8TBY8 1022 aa21.37■■□□□ 1.01
COL4A2-201ENST00000360467 WIZO95785 1651 aa21.37■■□□□ 1.01
COL4A2-201ENST00000360467 HMMRO75330 724 aa21.37■■□□□ 1.01
COL4A2-201ENST00000360467 CENPJQ9HC77 1338 aaPredicted RBP21.36■■□□□ 1.01
COL4A2-201ENST00000360467 WWC1Q8IX03 1113 aa21.36■■□□□ 1.01
COL4A2-201ENST00000360467 COG3Q96JB2 828 aa21.36■■□□□ 1.01
COL4A2-201ENST00000360467 PANK3Q9H999 370 aa21.34■■□□□ 1.01
COL4A2-201ENST00000360467 GBP4Q96PP9 640 aa21.34■■□□□ 1.01
COL4A2-201ENST00000360467 FOXD4L6Q3SYB3 417 aaPredicted RBP21.33■■□□□ 1.01
COL4A2-201ENST00000360467 FOXD4L3Q6VB84 417 aaPredicted RBP21.33■■□□□ 1.01
COL4A2-201ENST00000360467 TCERG1O14776 1098 aaKnown RBP21.31■■□□□ 1
COL4A2-201ENST00000360467 CCDC18Q5T9S5 1454 aa21.31■■□□□ 1
COL4A2-201ENST00000360467 LMOD3Q0VAK6 560 aa21.31■■□□□ 1
COL4A2-201ENST00000360467 L1TD1Q5T7N2 865 aaKnown RBP21.31■■□□□ 1
COL4A2-201ENST00000360467 PSME1Q06323 249 aa21.3■■□□□ 1
COL4A2-201ENST00000360467 NUTM2GQ5VZR2 741 aa21.3■■□□□ 1
COL4A2-201ENST00000360467 HTATSF1O43719 755 aaKnown RBP21.3■■□□□ 1
COL4A2-201ENST00000360467 TTC5Q8N0Z6 440 aa21.3■■□□□ 1
COL4A2-201ENST00000360467 PES1O00541 588 aaKnown RBP21.29■■□□□ 1
COL4A2-201ENST00000360467 RBM19Q9Y4C8 960 aaKnown RBP21.29■■□□□ 1
COL4A2-201ENST00000360467 PLIN1O60240 522 aa21.29■■□□□ 1
COL4A2-201ENST00000360467 SAMD1Q6SPF0 538 aaPredicted RBP21.29■■□□□ 1
COL4A2-201ENST00000360467 TIMELESSQ9UNS1 1208 aa21.28■■□□□ 1
COL4A2-201ENST00000360467 ST20-MTHFSA0A0A6YYL1 179 aa21.28■■□□□ 1
COL4A2-201ENST00000360467 TPM4P67936 248 aa21.28■■□□□ 1
COL4A2-201ENST00000360467 DEKP35659 375 aaKnown RBP21.27■■□□□ 1
COL4A2-201ENST00000360467 TRIM34Q9BYJ4 488 aa21.27■■□□□ 1
COL4A2-201ENST00000360467 TEFQ10587 303 aa21.26■□□□□ 0.99
COL4A2-201ENST00000360467 RAPGEF2Q9Y4G8 1499 aa21.26■□□□□ 0.99
COL4A2-201ENST00000360467 CCDC144AA2RUR9 1427 aa21.26■□□□□ 0.99
COL4A2-201ENST00000360467 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.25■□□□□ 0.99
COL4A2-201ENST00000360467 ANKRD45Q5TZF3 282 aa21.25■□□□□ 0.99
COL4A2-201ENST00000360467 CHMP4AQ9BY43 222 aa21.25■□□□□ 0.99
COL4A2-201ENST00000360467 FAM69CQ0P6D2 419 aa21.25■□□□□ 0.99
COL4A2-201ENST00000360467 KIF16BQ96L93 1317 aa21.24■□□□□ 0.99
COL4A2-201ENST00000360467 A0A0U1RQG5 324 aaPredicted RBP21.22■□□□□ 0.99
COL4A2-201ENST00000360467 SF3A1Q15459 793 aaKnown RBP21.22■□□□□ 0.99
COL4A2-201ENST00000360467 HDAC5Q9UQL6 1122 aa21.22■□□□□ 0.99
COL4A2-201ENST00000360467 H3BQV1 296 aa21.22■□□□□ 0.99
COL4A2-201ENST00000360467 IFFO2Q5TF58 517 aa21.22■□□□□ 0.99
COL4A2-201ENST00000360467 CTDP1Q9Y5B0 961 aaPredicted RBP21.21■□□□□ 0.99
COL4A2-201ENST00000360467 EVC2Q86UK5 1308 aa21.21■□□□□ 0.99
COL4A2-201ENST00000360467 VPS37DQ86XT2 251 aa21.2■□□□□ 0.98
COL4A2-201ENST00000360467 SYAP1Q96A49 352 aaPredicted RBP21.2■□□□□ 0.98
COL4A2-201ENST00000360467 C9orf78Q9NZ63 289 aaPredicted RBP21.2■□□□□ 0.98
COL4A2-201ENST00000360467 APPP05067 770 aa21.19■□□□□ 0.98
COL4A2-201ENST00000360467 OSCARQ8IYS5 282 aa21.19■□□□□ 0.98
COL4A2-201ENST00000360467 NLRP13Q86W25 1043 aa21.18■□□□□ 0.98
COL4A2-201ENST00000360467 NOL10Q9BSC4 688 aaKnown RBP21.18■□□□□ 0.98
COL4A2-201ENST00000360467 TCEAL9Q9UHQ7 104 aa21.18■□□□□ 0.98
COL4A2-201ENST00000360467 CGNL1Q0VF96 1302 aa21.18■□□□□ 0.98
COL4A2-201ENST00000360467 VGFO15240 615 aaPredicted RBP21.18■□□□□ 0.98
COL4A2-201ENST00000360467 PTPRGP23470 1445 aa21.17■□□□□ 0.98
COL4A2-201ENST00000360467 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
COL4A2-201ENST00000360467 FBXO3Q9UK99 471 aa21.17■□□□□ 0.98
COL4A2-201ENST00000360467 DHX16O60231 1041 aaKnown RBP21.17■□□□□ 0.98
COL4A2-201ENST00000360467 MCTP1Q6DN14 999 aa21.17■□□□□ 0.98
COL4A2-201ENST00000360467 CADPSQ9ULU8 1353 aa21.17■□□□□ 0.98
COL4A2-201ENST00000360467 TPD52L1Q16890 204 aaPredicted RBP21.16■□□□□ 0.98
COL4A2-201ENST00000360467 AKAP17AQ02040 695 aaKnown RBP21.16■□□□□ 0.98
COL4A2-201ENST00000360467 USP35Q9P2H5 1018 aa21.16■□□□□ 0.98
COL4A2-201ENST00000360467 KIF15Q9NS87 1388 aa21.16■□□□□ 0.98
COL4A2-201ENST00000360467 FAM184AQ8NB25 1140 aa21.16■□□□□ 0.98
COL4A2-201ENST00000360467 FOSBP53539 338 aa21.16■□□□□ 0.98
COL4A2-201ENST00000360467 FYB1O15117 783 aa21.15■□□□□ 0.98
COL4A2-201ENST00000360467 RSPH4AQ5TD94 716 aa21.15■□□□□ 0.98
COL4A2-201ENST00000360467 HMOX1P09601 288 aa21.14■□□□□ 0.98
COL4A2-201ENST00000360467 NEXNQ0ZGT2 675 aa21.14■□□□□ 0.98
COL4A2-201ENST00000360467 ATF3P18847 181 aa21.14■□□□□ 0.97
COL4A2-201ENST00000360467 CCDC34Q96HJ3 373 aa21.14■□□□□ 0.97
COL4A2-201ENST00000360467 AIMP1Q12904 312 aaKnown RBP21.14■□□□□ 0.97
COL4A2-201ENST00000360467 ST18O60284 1047 aa21.13■□□□□ 0.97
COL4A2-201ENST00000360467 SLC4A3P48751 1232 aa21.13■□□□□ 0.97
COL4A2-201ENST00000360467 CWC22Q9HCG8 908 aaKnown RBP21.13■□□□□ 0.97
COL4A2-201ENST00000360467 FAM177BA6PVY3 158 aa21.13■□□□□ 0.97
COL4A2-201ENST00000360467 MYBBP1AQ9BQG0 1328 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms