RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 ANKRD50Q9ULJ7 1429 aa28.88■■■□□ 2.21
HLA-DRB1-201ENST00000360004 CNTLNQ9NXG0 1405 aa28.87■■■□□ 2.21
HLA-DRB1-201ENST00000360004 PTPRMP28827 1452 aa28.87■■■□□ 2.21
HLA-DRB1-201ENST00000360004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.87■■■□□ 2.21
HLA-DRB1-201ENST00000360004 PPP6R1Q9UPN7 881 aa28.87■■■□□ 2.21
HLA-DRB1-201ENST00000360004 WASHC2CQ9Y4E1 1318 aa28.85■■■□□ 2.21
HLA-DRB1-201ENST00000360004 KANK1Q14678 1352 aa28.83■■■□□ 2.21
HLA-DRB1-201ENST00000360004 RNF17Q9BXT8 1623 aaKnown RBP28.8■■■□□ 2.2
HLA-DRB1-201ENST00000360004 CLTCQ00610 1675 aaKnown RBP28.79■■■□□ 2.2
HLA-DRB1-201ENST00000360004 KDM5DQ9BY66 1539 aa28.79■■■□□ 2.2
HLA-DRB1-201ENST00000360004 CEBPAP49715 358 aaPredicted RBP28.77■■■□□ 2.2
HLA-DRB1-201ENST00000360004 FAM135AQ9P2D6 1515 aa28.76■■■□□ 2.19
HLA-DRB1-201ENST00000360004 ZMYM3Q14202 1370 aa28.74■■■□□ 2.19
HLA-DRB1-201ENST00000360004 MROH2AA6NES4 1674 aa28.72■■■□□ 2.19
HLA-DRB1-201ENST00000360004 HFM1A2PYH4 1435 aa28.71■■■□□ 2.19
HLA-DRB1-201ENST00000360004 NAIPQ13075 1403 aa28.71■■■□□ 2.19
HLA-DRB1-201ENST00000360004 PRDM15P57071 1507 aaPredicted RBP28.71■■■□□ 2.19
HLA-DRB1-201ENST00000360004 MROH1Q8NDA8 1641 aa28.7■■■□□ 2.19
HLA-DRB1-201ENST00000360004 ZC3H13Q5T200 1668 aaKnown RBP28.7■■■□□ 2.18
HLA-DRB1-201ENST00000360004 GCC2Q8IWJ2 1684 aa28.7■■■□□ 2.18
HLA-DRB1-201ENST00000360004 DEPDC5O75140 1603 aa28.69■■■□□ 2.18
HLA-DRB1-201ENST00000360004 ABCC3O15438 1527 aa28.69■■■□□ 2.18
HLA-DRB1-201ENST00000360004 C3P01024 1663 aa28.68■■■□□ 2.18
HLA-DRB1-201ENST00000360004 CEP152O94986 1710 aa28.66■■■□□ 2.18
HLA-DRB1-201ENST00000360004 TRIM52Q96A61 297 aa28.64■■■□□ 2.18
HLA-DRB1-201ENST00000360004 NUP155O75694 1391 aa28.63■■■□□ 2.17
HLA-DRB1-201ENST00000360004 UNC13BO14795 1591 aa28.62■■■□□ 2.17
HLA-DRB1-201ENST00000360004 CAMSAP1Q5T5Y3 1602 aa28.6■■■□□ 2.17
HLA-DRB1-201ENST00000360004 PZPP20742 1482 aa28.59■■■□□ 2.17
HLA-DRB1-201ENST00000360004 NPATQ14207 1427 aa28.58■■■□□ 2.17
HLA-DRB1-201ENST00000360004 SETD5Q9C0A6 1442 aa28.58■■■□□ 2.17
HLA-DRB1-201ENST00000360004 FBXO31Q5XUX0 539 aaPredicted RBP28.56■■■□□ 2.16
HLA-DRB1-201ENST00000360004 VWDEQ8N2E2 1590 aa28.56■■■□□ 2.16
HLA-DRB1-201ENST00000360004 LMTK2Q8IWU2 1503 aa28.55■■■□□ 2.16
HLA-DRB1-201ENST00000360004 UHRF1BP1Q6BDS2 1440 aa28.54■■■□□ 2.16
HLA-DRB1-201ENST00000360004 TRIM26Q12899 539 aaPredicted RBP28.53■■■□□ 2.16
HLA-DRB1-201ENST00000360004 TNRQ92752 1358 aa28.52■■■□□ 2.16
HLA-DRB1-201ENST00000360004 IQGAP3Q86VI3 1631 aa28.51■■■□□ 2.15
HLA-DRB1-201ENST00000360004 ARHGAP31Q2M1Z3 1444 aa28.51■■■□□ 2.15
HLA-DRB1-201ENST00000360004 ACIN1Q9UKV3 1341 aaKnown RBP28.5■■■□□ 2.15
HLA-DRB1-201ENST00000360004 EFCAB6Q5THR3 1501 aa28.5■■■□□ 2.15
HLA-DRB1-201ENST00000360004 PREX1Q8TCU6 1659 aa28.5■■■□□ 2.15
HLA-DRB1-201ENST00000360004 TET3O43151 1660 aa28.49■■■□□ 2.15
HLA-DRB1-201ENST00000360004 ERVK-7P63135 1459 aa28.47■■■□□ 2.15
HLA-DRB1-201ENST00000360004 RAB3GAP2Q9H2M9 1393 aa28.47■■■□□ 2.15
HLA-DRB1-201ENST00000360004 SETD1BQ9UPS6 1966 aaKnown RBP28.46■■■□□ 2.15
HLA-DRB1-201ENST00000360004 SLC4A1APQ9BWU0 796 aaKnown RBP28.45■■■□□ 2.14
HLA-DRB1-201ENST00000360004 CFAP65Q6ZU64 1925 aaKnown RBP28.43■■■□□ 2.14
HLA-DRB1-201ENST00000360004 SPATA31D1Q6ZQQ2 1576 aa28.42■■■□□ 2.14
HLA-DRB1-201ENST00000360004 RPRD2Q5VT52 1461 aaKnown RBP28.42■■■□□ 2.14
HLA-DRB1-201ENST00000360004 LMTK3Q96Q04 1460 aa28.42■■■□□ 2.14
HLA-DRB1-201ENST00000360004 MYO3AQ8NEV4 1616 aa28.42■■■□□ 2.14
HLA-DRB1-201ENST00000360004 HSPA2P54652 639 aa28.4■■■□□ 2.14
HLA-DRB1-201ENST00000360004 NLRP1Q9C000 1473 aa28.38■■■□□ 2.13
HLA-DRB1-201ENST00000360004 PKD2Q13563 968 aa28.37■■■□□ 2.13
HLA-DRB1-201ENST00000360004 STAG3Q9UJ98 1225 aa28.37■■■□□ 2.13
HLA-DRB1-201ENST00000360004 E9PCH4 1651 aa28.36■■■□□ 2.13
HLA-DRB1-201ENST00000360004 CEP170BQ9Y4F5 1589 aaPredicted RBP28.36■■■□□ 2.13
HLA-DRB1-201ENST00000360004 A2ML1A8K2U0 1454 aa28.35■■■□□ 2.13
HLA-DRB1-201ENST00000360004 MPHOSPH9Q99550 1183 aa28.32■■■□□ 2.12
HLA-DRB1-201ENST00000360004 NOS1P29475 1434 aa28.32■■■□□ 2.12
HLA-DRB1-201ENST00000360004 HRCP23327 699 aa28.31■■■□□ 2.12
HLA-DRB1-201ENST00000360004 ZNF142P52746 1687 aaPredicted RBP28.31■■■□□ 2.12
HLA-DRB1-201ENST00000360004 SLC52A1Q9NWF4 448 aa28.3■■■□□ 2.12
HLA-DRB1-201ENST00000360004 UGGT1Q9NYU2 1555 aa28.28■■■□□ 2.12
HLA-DRB1-201ENST00000360004 CHGAP10645 457 aaKnown RBP28.28■■■□□ 2.12
HLA-DRB1-201ENST00000360004 THEMISQ8N1K5 641 aaPredicted RBP28.28■■■□□ 2.12
HLA-DRB1-201ENST00000360004 SYNMO15061 1565 aa28.28■■■□□ 2.12
HLA-DRB1-201ENST00000360004 IDI1Q13907 227 aa28.26■■■□□ 2.11
HLA-DRB1-201ENST00000360004 FOXD1Q16676 465 aa28.24■■■□□ 2.11
HLA-DRB1-201ENST00000360004 SPHKAPQ2M3C7 1700 aa28.23■■■□□ 2.11
HLA-DRB1-201ENST00000360004 PIK3C2BO00750 1634 aa28.21■■■□□ 2.11
HLA-DRB1-201ENST00000360004 PTPRTO14522 1441 aa28.18■■■□□ 2.1
HLA-DRB1-201ENST00000360004 PCGF6Q9BYE7 350 aa28.18■■■□□ 2.1
HLA-DRB1-201ENST00000360004 ADGRB3O60242 1522 aa28.16■■■□□ 2.1
HLA-DRB1-201ENST00000360004 TRPM2O94759 1503 aa28.16■■■□□ 2.1
HLA-DRB1-201ENST00000360004 PLA2R1Q13018 1463 aa28.15■■■□□ 2.1
HLA-DRB1-201ENST00000360004 UBR1Q8IWV7 1749 aa28.15■■■□□ 2.1
HLA-DRB1-201ENST00000360004 ANKLE2Q86XL3 938 aa28.15■■■□□ 2.1
HLA-DRB1-201ENST00000360004 DMRT2Q9Y5R5 561 aa28.14■■■□□ 2.1
HLA-DRB1-201ENST00000360004 EID1Q9Y6B2 187 aa28.14■■■□□ 2.1
HLA-DRB1-201ENST00000360004 NCKAP5LQ9HCH0 1330 aa28.14■■■□□ 2.09
HLA-DRB1-201ENST00000360004 CCDC144AA2RUR9 1427 aa28.11■■■□□ 2.09
HLA-DRB1-201ENST00000360004 ZNF326Q5BKZ1 582 aaKnown RBP28.11■■■□□ 2.09
HLA-DRB1-201ENST00000360004 CLTCL1P53675 1640 aa28.09■■■□□ 2.09
HLA-DRB1-201ENST00000360004 KDM5AP29375 1690 aaKnown RBP28.08■■■□□ 2.09
HLA-DRB1-201ENST00000360004 PPP1R15AO75807 674 aaPredicted RBP28.08■■■□□ 2.09
HLA-DRB1-201ENST00000360004 HDGFP51858 240 aaKnown RBP28.08■■■□□ 2.09
HLA-DRB1-201ENST00000360004 TXNDC2Q86VQ3 553 aa28.08■■■□□ 2.09
HLA-DRB1-201ENST00000360004 TMEM2Q9UHN6 1383 aa28.08■■■□□ 2.09
HLA-DRB1-201ENST00000360004 TMEM131LA2VDJ0 1609 aa28.05■■■□□ 2.08
HLA-DRB1-201ENST00000360004 BCANQ96GW7 911 aa28.04■■■□□ 2.08
HLA-DRB1-201ENST00000360004 STRCQ7RTU9 1775 aa28.04■■■□□ 2.08
HLA-DRB1-201ENST00000360004 SLIT1O75093 1534 aa28.02■■■□□ 2.08
HLA-DRB1-201ENST00000360004 SCAF11Q99590 1463 aaKnown RBP28.02■■■□□ 2.08
HLA-DRB1-201ENST00000360004 KIF1BO60333 1816 aa28.02■■■□□ 2.08
HLA-DRB1-201ENST00000360004 POLR1AO95602 1720 aaPredicted RBP28.02■■■□□ 2.08
HLA-DRB1-201ENST00000360004 RIMS2Q9UQ26 1411 aa28.01■■■□□ 2.08
HLA-DRB1-201ENST00000360004 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.01■■■□□ 2.07
HLA-DRB1-201ENST00000360004 ARHGAP23Q9P227 1491 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms