RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 KDM5CP41229 1560 aa29.77■■■□□ 2.36
FAM3A-202ENST00000359889 KIF3BO15066 747 aa29.74■■■□□ 2.35
FAM3A-202ENST00000359889 CCDC144AA2RUR9 1427 aa29.73■■■□□ 2.35
FAM3A-202ENST00000359889 EIF2AK4Q9P2K8 1649 aaKnown RBP29.73■■■□□ 2.35
FAM3A-202ENST00000359889 DIP2BQ9P265 1576 aa29.72■■■□□ 2.35
FAM3A-202ENST00000359889 KIDINS220Q9ULH0 1771 aa29.72■■■□□ 2.35
FAM3A-202ENST00000359889 A2MP01023 1474 aa29.71■■■□□ 2.35
FAM3A-202ENST00000359889 HECW2Q9P2P5 1572 aa29.71■■■□□ 2.35
FAM3A-202ENST00000359889 DEPDC5O75140 1603 aa29.69■■■□□ 2.34
FAM3A-202ENST00000359889 RAPGEF3O95398 923 aa29.67■■■□□ 2.34
FAM3A-202ENST00000359889 ATP10AO60312 1499 aa29.66■■■□□ 2.34
FAM3A-202ENST00000359889 EIF4G2P78344 907 aaKnown RBP eCLIP29.65■■■□□ 2.34
FAM3A-202ENST00000359889 NBPF8Q3BBV2 869 aa29.62■■■□□ 2.33
FAM3A-202ENST00000359889 PLA2R1Q13018 1463 aa29.61■■■□□ 2.33
FAM3A-202ENST00000359889 PRDM15P57071 1507 aaPredicted RBP29.61■■■□□ 2.33
FAM3A-202ENST00000359889 VWDEQ8N2E2 1590 aa29.59■■■□□ 2.33
FAM3A-202ENST00000359889 HIRIP3Q9BW71 556 aaPredicted RBP29.57■■■□□ 2.32
FAM3A-202ENST00000359889 UHRF1BP1Q6BDS2 1440 aa29.57■■■□□ 2.32
FAM3A-202ENST00000359889 TET3O43151 1660 aa29.57■■■□□ 2.32
FAM3A-202ENST00000359889 MIER1Q8N108 512 aa29.56■■■□□ 2.32
FAM3A-202ENST00000359889 HSPA5P11021 654 aaKnown RBP29.55■■■□□ 2.32
FAM3A-202ENST00000359889 ZNF326Q5BKZ1 582 aaKnown RBP29.55■■■□□ 2.32
FAM3A-202ENST00000359889 DCAF11Q8TEB1 546 aa29.54■■■□□ 2.32
FAM3A-202ENST00000359889 RICTORQ6R327 1708 aa29.53■■■□□ 2.32
FAM3A-202ENST00000359889 ABCA6Q8N139 1617 aa29.52■■■□□ 2.32
FAM3A-202ENST00000359889 RNF17Q9BXT8 1623 aaKnown RBP29.52■■■□□ 2.32
FAM3A-202ENST00000359889 MROH1Q8NDA8 1641 aa29.51■■■□□ 2.32
FAM3A-202ENST00000359889 FRMPD1Q5SYB0 1578 aa29.51■■■□□ 2.31
FAM3A-202ENST00000359889 PTPRTO14522 1441 aa29.51■■■□□ 2.31
FAM3A-202ENST00000359889 KDM2AQ9Y2K7 1162 aa29.5■■■□□ 2.31
FAM3A-202ENST00000359889 E9PCH4 1651 aa29.5■■■□□ 2.31
FAM3A-202ENST00000359889 LMTK2Q8IWU2 1503 aa29.5■■■□□ 2.31
FAM3A-202ENST00000359889 TRPM2O94759 1503 aa29.49■■■□□ 2.31
FAM3A-202ENST00000359889 DIP2CQ9Y2E4 1556 aa29.48■■■□□ 2.31
FAM3A-202ENST00000359889 DDX10Q13206 875 aaKnown RBP29.48■■■□□ 2.31
FAM3A-202ENST00000359889 RGL3Q3MIN7 710 aa29.48■■■□□ 2.31
FAM3A-202ENST00000359889 GGT6Q6P531 493 aa29.48■■■□□ 2.31
FAM3A-202ENST00000359889 ZMYM4Q5VZL5 1548 aa29.46■■■□□ 2.31
FAM3A-202ENST00000359889 BCORL1Q5H9F3 1711 aa29.46■■■□□ 2.31
FAM3A-202ENST00000359889 RALGAPBQ86X10 1494 aa29.45■■■□□ 2.3
FAM3A-202ENST00000359889 EFCAB6Q5THR3 1501 aa29.43■■■□□ 2.3
FAM3A-202ENST00000359889 PPRC1Q5VV67 1664 aaKnown RBP29.43■■■□□ 2.3
FAM3A-202ENST00000359889 WASHC2CQ9Y4E1 1318 aa29.42■■■□□ 2.3
FAM3A-202ENST00000359889 YEATS2Q9ULM3 1422 aa29.42■■■□□ 2.3
FAM3A-202ENST00000359889 TSPOAP1O95153 1857 aa29.41■■■□□ 2.3
FAM3A-202ENST00000359889 SPHKAPQ2M3C7 1700 aa29.4■■■□□ 2.3
FAM3A-202ENST00000359889 STAC3Q96MF2 364 aa29.4■■■□□ 2.3
FAM3A-202ENST00000359889 SPATA31E1Q6ZUB1 1445 aa29.38■■■□□ 2.29
FAM3A-202ENST00000359889 CARD11Q9BXL7 1154 aa29.37■■■□□ 2.29
FAM3A-202ENST00000359889 PRAG1Q86YV5 1406 aa29.37■■■□□ 2.29
FAM3A-202ENST00000359889 USP47Q96K76 1375 aa29.35■■■□□ 2.29
FAM3A-202ENST00000359889 KIF13AQ9H1H9 1805 aa29.34■■■□□ 2.29
FAM3A-202ENST00000359889 ABCC3O15438 1527 aa29.33■■■□□ 2.29
FAM3A-202ENST00000359889 ROCK2O75116 1388 aaKnown RBP29.33■■■□□ 2.29
FAM3A-202ENST00000359889 CLTCL1P53675 1640 aa29.3■■■□□ 2.28
FAM3A-202ENST00000359889 WASHC2AQ641Q2 1341 aa29.3■■■□□ 2.28
FAM3A-202ENST00000359889 CEP152O94986 1710 aa29.3■■■□□ 2.28
FAM3A-202ENST00000359889 NEURL4Q96JN8 1562 aa29.29■■■□□ 2.28
FAM3A-202ENST00000359889 NPATQ14207 1427 aa29.28■■■□□ 2.28
FAM3A-202ENST00000359889 REREQ9P2R6 1566 aa29.27■■■□□ 2.28
FAM3A-202ENST00000359889 CNTLNQ9NXG0 1405 aa29.26■■■□□ 2.28
FAM3A-202ENST00000359889 CCDC7Q96M83 1385 aa29.26■■■□□ 2.27
FAM3A-202ENST00000359889 PPP6R1Q9UPN7 881 aa29.25■■■□□ 2.27
FAM3A-202ENST00000359889 ANP32CO43423 234 aa29.24■■■□□ 2.27
FAM3A-202ENST00000359889 ZC3H13Q5T200 1668 aaKnown RBP29.23■■■□□ 2.27
FAM3A-202ENST00000359889 ARHGAP31Q2M1Z3 1444 aa29.23■■■□□ 2.27
FAM3A-202ENST00000359889 GPRASP1Q5JY77 1395 aa29.22■■■□□ 2.27
FAM3A-202ENST00000359889 AGLP35573 1532 aa29.22■■■□□ 2.27
FAM3A-202ENST00000359889 ARID4BQ4LE39 1312 aaPredicted RBP29.22■■■□□ 2.27
FAM3A-202ENST00000359889 TRPM1Q7Z4N2 1603 aa29.21■■■□□ 2.27
FAM3A-202ENST00000359889 CAMSAP1Q5T5Y3 1602 aa29.21■■■□□ 2.27
FAM3A-202ENST00000359889 CENPBP07199 599 aaPredicted RBP29.2■■■□□ 2.27
FAM3A-202ENST00000359889 COL17A1Q9UMD9 1497 aaPredicted RBP29.18■■■□□ 2.26
FAM3A-202ENST00000359889 C11orf95C9JLR9 678 aaPredicted RBP29.17■■■□□ 2.26
FAM3A-202ENST00000359889 KIF7Q2M1P5 1343 aa29.16■■■□□ 2.26
FAM3A-202ENST00000359889 NOS1P29475 1434 aa29.16■■■□□ 2.26
FAM3A-202ENST00000359889 UGGT1Q9NYU2 1555 aa29.15■■■□□ 2.26
FAM3A-202ENST00000359889 NBPF1Q3BBV0 1214 aa29.14■■■□□ 2.26
FAM3A-202ENST00000359889 ARHGEF40Q8TER5 1519 aa29.14■■■□□ 2.26
FAM3A-202ENST00000359889 LAMC1P11047 1609 aa29.14■■■□□ 2.26
FAM3A-202ENST00000359889 ST20-MTHFSA0A0A6YYL1 179 aa29.14■■■□□ 2.25
FAM3A-202ENST00000359889 CHGAP10645 457 aaKnown RBP29.13■■■□□ 2.25
FAM3A-202ENST00000359889 KIF1BO60333 1816 aa29.12■■■□□ 2.25
FAM3A-202ENST00000359889 MYOM2P54296 1465 aa29.11■■■□□ 2.25
FAM3A-202ENST00000359889 MADDQ8WXG6 1647 aa29.1■■■□□ 2.25
FAM3A-202ENST00000359889 YTHDC1Q96MU7 727 aaKnown RBP29.1■■■□□ 2.25
FAM3A-202ENST00000359889 RPGRIP1LQ68CZ1 1315 aa29.1■■■□□ 2.25
FAM3A-202ENST00000359889 ADGRB3O60242 1522 aa29.09■■■□□ 2.25
FAM3A-202ENST00000359889 SLC52A1Q9NWF4 448 aa29.09■■■□□ 2.25
FAM3A-202ENST00000359889 CCER2I3L3R5 266 aa29.08■■■□□ 2.25
FAM3A-202ENST00000359889 POLR1AO95602 1720 aaPredicted RBP29.06■■■□□ 2.24
FAM3A-202ENST00000359889 TRHP20396 242 aaPredicted RBP29.05■■■□□ 2.24
FAM3A-202ENST00000359889 POLR3GLQ9BT43 218 aa29.03■■■□□ 2.24
FAM3A-202ENST00000359889 ESF1Q9H501 851 aaKnown RBP29.03■■■□□ 2.24
FAM3A-202ENST00000359889 SYNMO15061 1565 aa29■■■□□ 2.23
FAM3A-202ENST00000359889 MLECQ14165 292 aa28.99■■■□□ 2.23
FAM3A-202ENST00000359889 PIK3C2BO00750 1634 aa28.99■■■□□ 2.23
FAM3A-202ENST00000359889 ADGRF5Q8IZF2 1346 aa28.98■■■□□ 2.23
FAM3A-202ENST00000359889 SIGLEC1Q9BZZ2 1709 aa28.98■■■□□ 2.23
FAM3A-202ENST00000359889 MROH2AA6NES4 1674 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms