RNA–Protein interactions for RNA: ENST00000359308.8

XRCC6-201, Transcript of X-ray repair cross complementing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC6, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-201ENST00000359308 TRAPPC8Q9Y2L5 1435 aa18.94■□□□□ 0.62
XRCC6-201ENST00000359308 CCDC144AA2RUR9 1427 aa18.94■□□□□ 0.62
XRCC6-201ENST00000359308 RGL3Q3MIN7 710 aa18.94■□□□□ 0.62
XRCC6-201ENST00000359308 ABCC1P33527 1531 aa18.93■□□□□ 0.62
XRCC6-201ENST00000359308 PLA2R1Q13018 1463 aa18.93■□□□□ 0.62
XRCC6-201ENST00000359308 EFCAB2Q5VUJ9 269 aa18.93■□□□□ 0.62
XRCC6-201ENST00000359308 FAM9BQ8IZU0 186 aa18.93■□□□□ 0.62
XRCC6-201ENST00000359308 MRS2Q9HD23 443 aa18.93■□□□□ 0.62
XRCC6-201ENST00000359308 IQGAP3Q86VI3 1631 aa18.91■□□□□ 0.62
XRCC6-201ENST00000359308 DUOX2Q9NRD8 1548 aa18.91■□□□□ 0.62
XRCC6-201ENST00000359308 DHX29Q7Z478 1369 aaKnown RBP18.9■□□□□ 0.62
XRCC6-201ENST00000359308 ST20-MTHFSA0A0A6YYL1 179 aa18.89■□□□□ 0.62
XRCC6-201ENST00000359308 AFAP1Q8N556 730 aa18.88■□□□□ 0.61
XRCC6-201ENST00000359308 ROCK2O75116 1388 aaKnown RBP18.88■□□□□ 0.61
XRCC6-201ENST00000359308 NEFLP07196 543 aa18.87■□□□□ 0.61
XRCC6-201ENST00000359308 ERBINQ96RT1 1412 aa18.86■□□□□ 0.61
XRCC6-201ENST00000359308 PRAG1Q86YV5 1406 aa18.86■□□□□ 0.61
XRCC6-201ENST00000359308 A2MP01023 1474 aa18.85■□□□□ 0.61
XRCC6-201ENST00000359308 MAGI2Q86UL8 1455 aa18.85■□□□□ 0.61
XRCC6-201ENST00000359308 NBPF1Q3BBV0 1214 aa18.84■□□□□ 0.61
XRCC6-201ENST00000359308 TRPM1Q7Z4N2 1603 aa18.84■□□□□ 0.61
XRCC6-201ENST00000359308 WDR7Q9Y4E6 1490 aa18.84■□□□□ 0.61
XRCC6-201ENST00000359308 SPAG9O60271 1321 aaKnown RBP18.84■□□□□ 0.61
XRCC6-201ENST00000359308 ZFYVE16Q7Z3T8 1539 aa18.82■□□□□ 0.6
XRCC6-201ENST00000359308 IRX6P78412 446 aaPredicted RBP18.8■□□□□ 0.6
XRCC6-201ENST00000359308 ARID4BQ4LE39 1312 aaPredicted RBP18.79■□□□□ 0.6
XRCC6-201ENST00000359308 FANCAO15360 1455 aa18.79■□□□□ 0.6
XRCC6-201ENST00000359308 ARAP3Q8WWN8 1544 aa18.77■□□□□ 0.6
XRCC6-201ENST00000359308 E9PCH4 1651 aa18.77■□□□□ 0.59
XRCC6-201ENST00000359308 ABCA9Q8IUA7 1624 aa18.76■□□□□ 0.59
XRCC6-201ENST00000359308 SENP3-EIF4A1A0A087X0R7 540 aa18.76■□□□□ 0.59
XRCC6-201ENST00000359308 MYT1LQ9UL68 1186 aa18.75■□□□□ 0.59
XRCC6-201ENST00000359308 ATP10AO60312 1499 aa18.75■□□□□ 0.59
XRCC6-201ENST00000359308 TSHZ2Q9NRE2 1034 aa18.75■□□□□ 0.59
XRCC6-201ENST00000359308 ASXL2Q76L83 1435 aa18.75■□□□□ 0.59
XRCC6-201ENST00000359308 RTEL1-TNFRSF6BF6WH68 1400 aa18.73■□□□□ 0.59
XRCC6-201ENST00000359308 ATP7AQ04656 1500 aa18.73■□□□□ 0.59
XRCC6-201ENST00000359308 ADGRL1O94910 1474 aa18.73■□□□□ 0.59
XRCC6-201ENST00000359308 ZBED9Q6R2W3 1325 aa18.73■□□□□ 0.59
XRCC6-201ENST00000359308 SCAPERQ9BY12 1400 aa18.72■□□□□ 0.59
XRCC6-201ENST00000359308 INO80Q9ULG1 1556 aaPredicted RBP18.72■□□□□ 0.59
XRCC6-201ENST00000359308 GPRASP1Q5JY77 1395 aa18.72■□□□□ 0.59
XRCC6-201ENST00000359308 PRDM15P57071 1507 aaPredicted RBP18.7■□□□□ 0.58
XRCC6-201ENST00000359308 DEPDC5O75140 1603 aa18.69■□□□□ 0.58
XRCC6-201ENST00000359308 KIF3BO15066 747 aa18.69■□□□□ 0.58
XRCC6-201ENST00000359308 DISP3Q9P2K9 1392 aa18.69■□□□□ 0.58
XRCC6-201ENST00000359308 EIF2AK4Q9P2K8 1649 aaKnown RBP18.68■□□□□ 0.58
XRCC6-201ENST00000359308 SPHKAPQ2M3C7 1700 aa18.68■□□□□ 0.58
XRCC6-201ENST00000359308 TESK2Q96S53 571 aa18.67■□□□□ 0.58
XRCC6-201ENST00000359308 CLTCL1P53675 1640 aa18.67■□□□□ 0.58
XRCC6-201ENST00000359308 LAMC1P11047 1609 aa18.66■□□□□ 0.58
XRCC6-201ENST00000359308 TRPM2O94759 1503 aa18.66■□□□□ 0.58
XRCC6-201ENST00000359308 COL17A1Q9UMD9 1497 aaPredicted RBP18.66■□□□□ 0.58
XRCC6-201ENST00000359308 TMC1Q8TDI8 760 aa18.65■□□□□ 0.58
XRCC6-201ENST00000359308 TET3O43151 1660 aa18.64■□□□□ 0.58
XRCC6-201ENST00000359308 RNF17Q9BXT8 1623 aaKnown RBP18.64■□□□□ 0.57
XRCC6-201ENST00000359308 OSCARQ8IYS5 282 aa18.64■□□□□ 0.57
XRCC6-201ENST00000359308 PNISRQ8TF01 805 aaKnown RBP18.64■□□□□ 0.57
XRCC6-201ENST00000359308 CEP152O94986 1710 aa18.64■□□□□ 0.57
XRCC6-201ENST00000359308 MADDQ8WXG6 1647 aa18.64■□□□□ 0.57
XRCC6-201ENST00000359308 UGGT1Q9NYU2 1555 aa18.62■□□□□ 0.57
XRCC6-201ENST00000359308 MROH1Q8NDA8 1641 aa18.62■□□□□ 0.57
XRCC6-201ENST00000359308 PTPRTO14522 1441 aa18.62■□□□□ 0.57
XRCC6-201ENST00000359308 KANK1Q14678 1352 aa18.61■□□□□ 0.57
XRCC6-201ENST00000359308 MYBBP1AQ9BQG0 1328 aaKnown RBP18.61■□□□□ 0.57
XRCC6-201ENST00000359308 KIDINS220Q9ULH0 1771 aa18.61■□□□□ 0.57
XRCC6-201ENST00000359308 VWDEQ8N2E2 1590 aa18.61■□□□□ 0.57
XRCC6-201ENST00000359308 NPM1P06748 294 aaKnown RBP eCLIP18.59■□□□□ 0.57
XRCC6-201ENST00000359308 PER1O15534 1290 aaPredicted RBP18.58■□□□□ 0.57
XRCC6-201ENST00000359308 RALBP1Q15311 655 aa18.58■□□□□ 0.57
XRCC6-201ENST00000359308 CC2D1BQ5T0F9 858 aaKnown RBP18.58■□□□□ 0.56
XRCC6-201ENST00000359308 KTN1Q86UP2 1357 aaKnown RBP18.57■□□□□ 0.56
XRCC6-201ENST00000359308 TMF1P82094 1093 aa18.57■□□□□ 0.56
XRCC6-201ENST00000359308 PANK3Q9H999 370 aa18.57■□□□□ 0.56
XRCC6-201ENST00000359308 BRD4O60885 1362 aaPredicted RBP18.56■□□□□ 0.56
XRCC6-201ENST00000359308 PARD3Q8TEW0 1356 aa18.56■□□□□ 0.56
XRCC6-201ENST00000359308 IQGAP1P46940 1657 aa18.56■□□□□ 0.56
XRCC6-201ENST00000359308 ZNF518AQ6AHZ1 1483 aa18.55■□□□□ 0.56
XRCC6-201ENST00000359308 CD109Q6YHK3 1445 aa18.55■□□□□ 0.56
XRCC6-201ENST00000359308 LRPPRCP42704 1394 aaKnown RBP18.54■□□□□ 0.56
XRCC6-201ENST00000359308 PPRC1Q5VV67 1664 aaKnown RBP18.54■□□□□ 0.56
XRCC6-201ENST00000359308 CFAP65Q6ZU64 1925 aaKnown RBP18.53■□□□□ 0.56
XRCC6-201ENST00000359308 SMG6Q86US8 1419 aaKnown RBP18.53■□□□□ 0.56
XRCC6-201ENST00000359308 EFCAB6Q5THR3 1501 aa18.52■□□□□ 0.56
XRCC6-201ENST00000359308 NLRP13Q86W25 1043 aa18.52■□□□□ 0.56
XRCC6-201ENST00000359308 NUDCQ9Y266 331 aa18.51■□□□□ 0.55
XRCC6-201ENST00000359308 POGZQ7Z3K3 1410 aa18.5■□□□□ 0.55
XRCC6-201ENST00000359308 SALL2Q9Y467 1007 aaPredicted RBP18.5■□□□□ 0.55
XRCC6-201ENST00000359308 MROH2AA6NES4 1674 aa18.5■□□□□ 0.55
XRCC6-201ENST00000359308 SCAF11Q99590 1463 aaKnown RBP18.49■□□□□ 0.55
XRCC6-201ENST00000359308 FRMPD1Q5SYB0 1578 aa18.48■□□□□ 0.55
XRCC6-201ENST00000359308 ADGRF5Q8IZF2 1346 aa18.48■□□□□ 0.55
XRCC6-201ENST00000359308 KIF1BO60333 1816 aa18.48■□□□□ 0.55
XRCC6-201ENST00000359308 GGT6Q6P531 493 aa18.48■□□□□ 0.55
XRCC6-201ENST00000359308 CFAP70Q5T0N1 1121 aa18.48■□□□□ 0.55
XRCC6-201ENST00000359308 B4GALNT3Q6L9W6 998 aa18.47■□□□□ 0.55
XRCC6-201ENST00000359308 PPP4R2Q9NY27 417 aa18.47■□□□□ 0.55
XRCC6-201ENST00000359308 ABCA6Q8N139 1617 aa18.47■□□□□ 0.55
XRCC6-201ENST00000359308 RAPGEF3O95398 923 aa18.46■□□□□ 0.55
XRCC6-201ENST00000359308 MAP3K4Q9Y6R4 1608 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms