RNA–Protein interactions for RNA: ENST00000358951.6

RAB3GAP2-202, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3GAP2, Length 7,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-202ENST00000358951 TRIM6-TRIM34B2RNG4 842 aa13.8□□□□□ -0.2
RAB3GAP2-202ENST00000358951 ZNF771Q7L3S4 317 aaPredicted RBP13.8□□□□□ -0.2
RAB3GAP2-202ENST00000358951 SKOR2Q2VWA4 1001 aaPredicted RBP13.79□□□□□ -0.2
RAB3GAP2-202ENST00000358951 FAM43AQ8N2R8 423 aa13.79□□□□□ -0.2
RAB3GAP2-202ENST00000358951 FRAT2O75474 233 aaPredicted RBP13.78□□□□□ -0.2
RAB3GAP2-202ENST00000358951 PHLDB1Q86UU1 1377 aa13.78□□□□□ -0.2
RAB3GAP2-202ENST00000358951 AKNAQ7Z591 1439 aa13.78□□□□□ -0.2
RAB3GAP2-202ENST00000358951 A0A0U1RQG5 324 aaPredicted RBP13.77□□□□□ -0.2
RAB3GAP2-202ENST00000358951 CNTLNQ9NXG0 1405 aa13.77□□□□□ -0.2
RAB3GAP2-202ENST00000358951 PHF14O94880 888 aa13.77□□□□□ -0.21
RAB3GAP2-202ENST00000358951 STK26Q9P289 416 aa13.77□□□□□ -0.21
RAB3GAP2-202ENST00000358951 USP47Q96K76 1375 aa13.76□□□□□ -0.21
RAB3GAP2-202ENST00000358951 ST18O60284 1047 aa13.76□□□□□ -0.21
RAB3GAP2-202ENST00000358951 ANKRD45Q5TZF3 282 aa13.76□□□□□ -0.21
RAB3GAP2-202ENST00000358951 R3HCC1Q9Y3T6 440 aaKnown RBP13.75□□□□□ -0.21
RAB3GAP2-202ENST00000358951 HSP90B1P14625 803 aaKnown RBP13.75□□□□□ -0.21
RAB3GAP2-202ENST00000358951 CHMP5Q9NZZ3 219 aa13.75□□□□□ -0.21
RAB3GAP2-202ENST00000358951 CCDC7Q96M83 1385 aa13.74□□□□□ -0.21
RAB3GAP2-202ENST00000358951 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.74□□□□□ -0.21
RAB3GAP2-202ENST00000358951 WASHC2AQ641Q2 1341 aa13.74□□□□□ -0.21
RAB3GAP2-202ENST00000358951 BCL11BQ9C0K0 894 aaPredicted RBP13.73□□□□□ -0.21
RAB3GAP2-202ENST00000358951 RBM10P98175 930 aaKnown RBP13.73□□□□□ -0.21
RAB3GAP2-202ENST00000358951 GNL2Q13823 731 aaKnown RBP13.73□□□□□ -0.21
RAB3GAP2-202ENST00000358951 MCTP1Q6DN14 999 aa13.72□□□□□ -0.21
RAB3GAP2-202ENST00000358951 ZNF592Q92610 1267 aa13.72□□□□□ -0.21
RAB3GAP2-202ENST00000358951 KIF7Q2M1P5 1343 aa13.72□□□□□ -0.21
RAB3GAP2-202ENST00000358951 RTF1Q92541 710 aaKnown RBP13.71□□□□□ -0.21
RAB3GAP2-202ENST00000358951 KANK1Q14678 1352 aa13.71□□□□□ -0.21
RAB3GAP2-202ENST00000358951 E9PSI1 815 aa13.71□□□□□ -0.21
RAB3GAP2-202ENST00000358951 CSPP1Q1MSJ5 1256 aa13.71□□□□□ -0.21
RAB3GAP2-202ENST00000358951 SLC4A10Q6U841 1118 aa13.71□□□□□ -0.21
RAB3GAP2-202ENST00000358951 ANKRD30AQ9BXX3 1397 aa13.71□□□□□ -0.22
RAB3GAP2-202ENST00000358951 APAF1O14727 1248 aa13.7□□□□□ -0.22
RAB3GAP2-202ENST00000358951 TPM4P67936 248 aa13.69□□□□□ -0.22
RAB3GAP2-202ENST00000358951 CDCA7LQ96GN5 454 aa13.69□□□□□ -0.22
RAB3GAP2-202ENST00000358951 KIF21BO75037 1637 aa13.69□□□□□ -0.22
RAB3GAP2-202ENST00000358951 MRE11P49959 708 aa13.68□□□□□ -0.22
RAB3GAP2-202ENST00000358951 TRAK2O60296 914 aa13.68□□□□□ -0.22
RAB3GAP2-202ENST00000358951 HTATSF1O43719 755 aaKnown RBP13.68□□□□□ -0.22
RAB3GAP2-202ENST00000358951 RILPL2Q969X0 211 aa13.68□□□□□ -0.22
RAB3GAP2-202ENST00000358951 C22orf23Q9BZE7 217 aa13.68□□□□□ -0.22
RAB3GAP2-202ENST00000358951 EIF3AQ14152 1382 aaKnown RBP13.67□□□□□ -0.22
RAB3GAP2-202ENST00000358951 CGNL1Q0VF96 1302 aa13.67□□□□□ -0.22
RAB3GAP2-202ENST00000358951 ZKSCAN2Q63HK3 967 aa13.67□□□□□ -0.22
RAB3GAP2-202ENST00000358951 NASPP49321 788 aaPredicted RBP13.67□□□□□ -0.22
RAB3GAP2-202ENST00000358951 HNRNPMP52272 730 aaKnown RBP eCLIP13.67□□□□□ -0.22
RAB3GAP2-202ENST00000358951 HDGFL2Q7Z4V5 671 aaPredicted RBP13.67□□□□□ -0.22
RAB3GAP2-202ENST00000358951 KIF16BQ96L93 1317 aa13.67□□□□□ -0.22
RAB3GAP2-202ENST00000358951 PANK1Q8TE04 598 aa13.67□□□□□ -0.22
RAB3GAP2-202ENST00000358951 GOLGA6L1Q8N7Z2 621 aa13.67□□□□□ -0.22
RAB3GAP2-202ENST00000358951 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.66□□□□□ -0.22
RAB3GAP2-202ENST00000358951 LMOD2Q6P5Q4 547 aa13.66□□□□□ -0.22
RAB3GAP2-202ENST00000358951 CCDC184Q52MB2 194 aa13.66□□□□□ -0.22
RAB3GAP2-202ENST00000358951 ELL2O00472 640 aaPredicted RBP13.66□□□□□ -0.22
RAB3GAP2-202ENST00000358951 BACH2Q9BYV9 841 aa13.65□□□□□ -0.22
RAB3GAP2-202ENST00000358951 CHMP3Q9Y3E7 222 aa13.65□□□□□ -0.22
RAB3GAP2-202ENST00000358951 WDR97A6NE52 1622 aa13.65□□□□□ -0.22
RAB3GAP2-202ENST00000358951 TPM2P07951 284 aa13.64□□□□□ -0.23
RAB3GAP2-202ENST00000358951 NUTM2DQ5VT03 806 aaPredicted RBP13.64□□□□□ -0.23
RAB3GAP2-202ENST00000358951 HMMRO75330 724 aa13.63□□□□□ -0.23
RAB3GAP2-202ENST00000358951 CCAR2Q8N163 923 aaKnown RBP13.63□□□□□ -0.23
RAB3GAP2-202ENST00000358951 CREBRFQ8IUR6 639 aa13.62□□□□□ -0.23
RAB3GAP2-202ENST00000358951 HAP1P54257 671 aaPredicted RBP13.62□□□□□ -0.23
RAB3GAP2-202ENST00000358951 RNF214Q8ND24 703 aa13.61□□□□□ -0.23
RAB3GAP2-202ENST00000358951 GOLGA6L19H0YKK7 550 aa13.61□□□□□ -0.23
RAB3GAP2-202ENST00000358951 LNPKQ9C0E8 428 aa13.6□□□□□ -0.23
RAB3GAP2-202ENST00000358951 NOC3LQ8WTT2 800 aaKnown RBP13.6□□□□□ -0.23
RAB3GAP2-202ENST00000358951 DZIP1LQ8IYY4 767 aaKnown RBP13.59□□□□□ -0.23
RAB3GAP2-202ENST00000358951 CAVIN1Q6NZI2 390 aaKnown RBP13.59□□□□□ -0.23
RAB3GAP2-202ENST00000358951 CCDC39Q9UFE4 941 aa13.59□□□□□ -0.23
RAB3GAP2-202ENST00000358951 GPATCH3Q96I76 525 aa13.59□□□□□ -0.23
RAB3GAP2-202ENST00000358951 SKAP1Q86WV1 359 aa13.59□□□□□ -0.23
RAB3GAP2-202ENST00000358951 STK31Q9BXU1 1019 aa13.59□□□□□ -0.23
RAB3GAP2-202ENST00000358951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.58□□□□□ -0.244e-6■■■■□ 21.1
RAB3GAP2-202ENST00000358951 PODXL2Q9NZ53 605 aa13.58□□□□□ -0.24
RAB3GAP2-202ENST00000358951 H3BQV1 296 aa13.58□□□□□ -0.24
RAB3GAP2-202ENST00000358951 IFFO2Q5TF58 517 aa13.58□□□□□ -0.24
RAB3GAP2-202ENST00000358951 GGT6Q6P531 493 aa13.58□□□□□ -0.24
RAB3GAP2-202ENST00000358951 DDX19BQ9UMR2 479 aa13.58□□□□□ -0.24
RAB3GAP2-202ENST00000358951 TRAK1Q9UPV9 953 aa13.58□□□□□ -0.24
RAB3GAP2-202ENST00000358951 SMG6Q86US8 1419 aaKnown RBP13.58□□□□□ -0.24
RAB3GAP2-202ENST00000358951 UACAQ9BZF9 1416 aa13.57□□□□□ -0.24
RAB3GAP2-202ENST00000358951 CCDC144AA2RUR9 1427 aa13.57□□□□□ -0.24
RAB3GAP2-202ENST00000358951 FBXW7Q969H0 707 aa13.57□□□□□ -0.24
RAB3GAP2-202ENST00000358951 ADAMTS8Q9UP79 889 aa13.57□□□□□ -0.24
RAB3GAP2-202ENST00000358951 TDRD9Q8NDG6 1382 aaKnown RBP13.56□□□□□ -0.24
RAB3GAP2-202ENST00000358951 GRPEL1Q9HAV7 217 aa13.56□□□□□ -0.24
RAB3GAP2-202ENST00000358951 CCDC173Q0VFZ6 552 aa13.56□□□□□ -0.24
RAB3GAP2-202ENST00000358951 BECN2A8MW95 431 aa13.56□□□□□ -0.24
RAB3GAP2-202ENST00000358951 IFT57Q9NWB7 429 aa13.56□□□□□ -0.24
RAB3GAP2-202ENST00000358951 BRD4O60885 1362 aaPredicted RBP13.55□□□□□ -0.24
RAB3GAP2-202ENST00000358951 NUCB2P80303 420 aa13.55□□□□□ -0.24
RAB3GAP2-202ENST00000358951 SF3A1Q15459 793 aaKnown RBP13.55□□□□□ -0.24
RAB3GAP2-202ENST00000358951 LRRC9Q6ZRR7 1453 aa13.55□□□□□ -0.24
RAB3GAP2-202ENST00000358951 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
RAB3GAP2-202ENST00000358951 SPAG9O60271 1321 aaKnown RBP13.54□□□□□ -0.24
RAB3GAP2-202ENST00000358951 MAP7D2Q96T17 732 aa13.54□□□□□ -0.24
RAB3GAP2-202ENST00000358951 SMARCA4P51532 1647 aa13.54□□□□□ -0.24
RAB3GAP2-202ENST00000358951 PDZRN3Q9UPQ7 1066 aa13.54□□□□□ -0.24
RAB3GAP2-202ENST00000358951 CCDC9Q9Y3X0 531 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms