RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 RPRD2Q5VT52 1461 aaKnown RBP19.01■□□□□ 0.63
NFIX-201ENST00000358552 UNC13BO14795 1591 aa19.01■□□□□ 0.63
NFIX-201ENST00000358552 MAGI2Q86UL8 1455 aa18.99■□□□□ 0.63
NFIX-201ENST00000358552 ZMYM4Q5VZL5 1548 aa18.98■□□□□ 0.63
NFIX-201ENST00000358552 DHX29Q7Z478 1369 aaKnown RBP18.98■□□□□ 0.63
NFIX-201ENST00000358552 COL17A1Q9UMD9 1497 aaPredicted RBP18.98■□□□□ 0.63
NFIX-201ENST00000358552 FAM135AQ9P2D6 1515 aa18.97■□□□□ 0.63
NFIX-201ENST00000358552 DIEXFQ68CQ4 756 aaKnown RBP18.97■□□□□ 0.63
NFIX-201ENST00000358552 MYT1LQ9UL68 1186 aa18.97■□□□□ 0.63
NFIX-201ENST00000358552 KANK1Q14678 1352 aa18.95■□□□□ 0.62
NFIX-201ENST00000358552 IQGAP3Q86VI3 1631 aa18.95■□□□□ 0.62
NFIX-201ENST00000358552 EIF2AK4Q9P2K8 1649 aaKnown RBP18.95■□□□□ 0.62
NFIX-201ENST00000358552 ABCA6Q8N139 1617 aa18.92■□□□□ 0.62
NFIX-201ENST00000358552 CENPBP07199 599 aaPredicted RBP18.91■□□□□ 0.62
NFIX-201ENST00000358552 FOXD1Q16676 465 aa18.91■□□□□ 0.62
NFIX-201ENST00000358552 ATP10AO60312 1499 aa18.9■□□□□ 0.62
NFIX-201ENST00000358552 DIP2CQ9Y2E4 1556 aa18.9■□□□□ 0.62
NFIX-201ENST00000358552 L3MBTL2Q969R5 705 aa18.88■□□□□ 0.61
NFIX-201ENST00000358552 A2MP01023 1474 aa18.88■□□□□ 0.61
NFIX-201ENST00000358552 PELP1Q8IZL8 1130 aaKnown RBP18.88■□□□□ 0.61
NFIX-201ENST00000358552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.88■□□□□ 0.611e-8■■■■■ 27.4
NFIX-201ENST00000358552 DEPDC5O75140 1603 aa18.88■□□□□ 0.61
NFIX-201ENST00000358552 YEATS2Q9ULM3 1422 aa18.87■□□□□ 0.61
NFIX-201ENST00000358552 BCORL1Q5H9F3 1711 aa18.85■□□□□ 0.61
NFIX-201ENST00000358552 CCDC144AA2RUR9 1427 aa18.85■□□□□ 0.61
NFIX-201ENST00000358552 KIF3BO15066 747 aa18.85■□□□□ 0.61
NFIX-201ENST00000358552 STAC3Q96MF2 364 aa18.84■□□□□ 0.61
NFIX-201ENST00000358552 ARHGEF40Q8TER5 1519 aa18.83■□□□□ 0.6
NFIX-201ENST00000358552 REREQ9P2R6 1566 aa18.82■□□□□ 0.6
NFIX-201ENST00000358552 VWDEQ8N2E2 1590 aa18.82■□□□□ 0.6
NFIX-201ENST00000358552 PRDM15P57071 1507 aaPredicted RBP18.82■□□□□ 0.6
NFIX-201ENST00000358552 LMTK2Q8IWU2 1503 aa18.79■□□□□ 0.6
NFIX-201ENST00000358552 RNF17Q9BXT8 1623 aaKnown RBP18.79■□□□□ 0.6
NFIX-201ENST00000358552 TET3O43151 1660 aa18.79■□□□□ 0.6
NFIX-201ENST00000358552 UHRF1BP1Q6BDS2 1440 aa18.78■□□□□ 0.6
NFIX-201ENST00000358552 PTPRTO14522 1441 aa18.76■□□□□ 0.59
NFIX-201ENST00000358552 MROH1Q8NDA8 1641 aa18.76■□□□□ 0.59
NFIX-201ENST00000358552 EIF4G2P78344 907 aaKnown RBP eCLIP18.76■□□□□ 0.592e-6■■■■■ 26.9
NFIX-201ENST00000358552 AGLP35573 1532 aa18.76■□□□□ 0.59
NFIX-201ENST00000358552 PPP6R1Q9UPN7 881 aa18.75■□□□□ 0.59
NFIX-201ENST00000358552 PLA2R1Q13018 1463 aa18.74■□□□□ 0.59
NFIX-201ENST00000358552 SIGLEC1Q9BZZ2 1709 aa18.74■□□□□ 0.59
NFIX-201ENST00000358552 TRPM2O94759 1503 aa18.72■□□□□ 0.59
NFIX-201ENST00000358552 NEURL4Q96JN8 1562 aa18.72■□□□□ 0.59
NFIX-201ENST00000358552 SCAF1Q9H7N4 1312 aaKnown RBP18.71■□□□□ 0.59
NFIX-201ENST00000358552 E9PCH4 1651 aa18.7■□□□□ 0.58
NFIX-201ENST00000358552 GGT6Q6P531 493 aa18.69■□□□□ 0.58
NFIX-201ENST00000358552 CEP152O94986 1710 aa18.68■□□□□ 0.58
NFIX-201ENST00000358552 EFCAB6Q5THR3 1501 aa18.68■□□□□ 0.58
NFIX-201ENST00000358552 NBPF8Q3BBV2 869 aa18.67■□□□□ 0.58
NFIX-201ENST00000358552 DCAF11Q8TEB1 546 aa18.67■□□□□ 0.58
NFIX-201ENST00000358552 WASHC2CQ9Y4E1 1318 aa18.67■□□□□ 0.58
NFIX-201ENST00000358552 ZC3H13Q5T200 1668 aaKnown RBP18.66■□□□□ 0.58
NFIX-201ENST00000358552 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
NFIX-201ENST00000358552 RALGAPBQ86X10 1494 aa18.65■□□□□ 0.58
NFIX-201ENST00000358552 ARHGAP31Q2M1Z3 1444 aa18.65■□□□□ 0.58
NFIX-201ENST00000358552 CFAP65Q6ZU64 1925 aaKnown RBP18.64■□□□□ 0.57
NFIX-201ENST00000358552 ABCC3O15438 1527 aa18.63■□□□□ 0.57
NFIX-201ENST00000358552 CNTLNQ9NXG0 1405 aa18.63■□□□□ 0.57
NFIX-201ENST00000358552 HSPA5P11021 654 aaKnown RBP18.63■□□□□ 0.57
NFIX-201ENST00000358552 SPATA31E1Q6ZUB1 1445 aa18.62■□□□□ 0.57
NFIX-201ENST00000358552 ARID4BQ4LE39 1312 aaPredicted RBP18.61■□□□□ 0.57
NFIX-201ENST00000358552 CAMSAP1Q5T5Y3 1602 aa18.61■□□□□ 0.57
NFIX-201ENST00000358552 PRAG1Q86YV5 1406 aa18.6■□□□□ 0.57
NFIX-201ENST00000358552 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
NFIX-201ENST00000358552 RGL3Q3MIN7 710 aa18.58■□□□□ 0.57
NFIX-201ENST00000358552 CLTCQ00610 1675 aaKnown RBP18.58■□□□□ 0.56
NFIX-201ENST00000358552 NPATQ14207 1427 aa18.58■□□□□ 0.56
NFIX-201ENST00000358552 ZNF326Q5BKZ1 582 aaKnown RBP18.57■□□□□ 0.56
NFIX-201ENST00000358552 MLECQ14165 292 aa18.57■□□□□ 0.56
NFIX-201ENST00000358552 CARD11Q9BXL7 1154 aa18.57■□□□□ 0.56
NFIX-201ENST00000358552 GPRASP1Q5JY77 1395 aa18.56■□□□□ 0.56
NFIX-201ENST00000358552 SLC52A1Q9NWF4 448 aa18.56■□□□□ 0.56
NFIX-201ENST00000358552 RPGRIP1LQ68CZ1 1315 aa18.56■□□□□ 0.56
NFIX-201ENST00000358552 ROCK2O75116 1388 aaKnown RBP18.55■□□□□ 0.56
NFIX-201ENST00000358552 USP47Q96K76 1375 aa18.55■□□□□ 0.56
NFIX-201ENST00000358552 NOS1P29475 1434 aa18.54■□□□□ 0.56
NFIX-201ENST00000358552 CLTCL1P53675 1640 aa18.53■□□□□ 0.56
NFIX-201ENST00000358552 SLC24A1O60721 1099 aa18.53■□□□□ 0.56
NFIX-201ENST00000358552 KIF1BO60333 1816 aa18.53■□□□□ 0.56
NFIX-201ENST00000358552 LAMC1P11047 1609 aa18.52■□□□□ 0.56
NFIX-201ENST00000358552 DDX10Q13206 875 aaKnown RBP18.52■□□□□ 0.56
NFIX-201ENST00000358552 MIER1Q8N108 512 aa18.52■□□□□ 0.56
NFIX-201ENST00000358552 FER1L4A9Z1Z3 1794 aa18.52■□□□□ 0.56
NFIX-201ENST00000358552 ESF1Q9H501 851 aaKnown RBP18.52■□□□□ 0.55
NFIX-201ENST00000358552 MROH2AA6NES4 1674 aa18.51■□□□□ 0.55
NFIX-201ENST00000358552 MYOM2P54296 1465 aa18.5■□□□□ 0.55
NFIX-201ENST00000358552 TRPM1Q7Z4N2 1603 aa18.49■□□□□ 0.55
NFIX-201ENST00000358552 HIRIP3Q9BW71 556 aaPredicted RBP18.49■□□□□ 0.55
NFIX-201ENST00000358552 PREX1Q8TCU6 1659 aa18.49■□□□□ 0.55
NFIX-201ENST00000358552 ZMYM3Q14202 1370 aa18.47■□□□□ 0.55
NFIX-201ENST00000358552 CCDC7Q96M83 1385 aa18.47■□□□□ 0.55
NFIX-201ENST00000358552 WASHC2AQ641Q2 1341 aa18.46■□□□□ 0.55
NFIX-201ENST00000358552 ANP32CO43423 234 aa18.46■□□□□ 0.55
NFIX-201ENST00000358552 ADAMTSL3P82987 1691 aa18.45■□□□□ 0.54
NFIX-201ENST00000358552 ADGRB3O60242 1522 aa18.45■□□□□ 0.54
NFIX-201ENST00000358552 POLR1AO95602 1720 aaPredicted RBP18.45■□□□□ 0.54
NFIX-201ENST00000358552 KIAA1210Q9ULL0 1709 aa18.45■□□□□ 0.54
NFIX-201ENST00000358552 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
NFIX-201ENST00000358552 SYNMO15061 1565 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms