RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 ARHGAP5Q13017 1502 aa18.04■□□□□ 0.48
ATN1-201ENST00000356654 DDRGK1Q96HY6 314 aa18.04■□□□□ 0.48
ATN1-201ENST00000356654 TMEM132EQ6IEE7 984 aa18.04■□□□□ 0.48
ATN1-201ENST00000356654 EPRSP07814 1512 aaKnown RBP18.04■□□□□ 0.48
ATN1-201ENST00000356654 BECN1Q14457 450 aa18.03■□□□□ 0.48
ATN1-201ENST00000356654 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
ATN1-201ENST00000356654 EHBP1L1Q8N3D4 1523 aa18.02■□□□□ 0.48
ATN1-201ENST00000356654 CLUAP1Q96AJ1 413 aa18.02■□□□□ 0.48
ATN1-201ENST00000356654 CFAP70Q5T0N1 1121 aa18.02■□□□□ 0.47
ATN1-201ENST00000356654 NGDNQ8NEJ9 315 aaKnown RBP18.02■□□□□ 0.47
ATN1-201ENST00000356654 C9orf84Q5VXU9 1444 aa18.01■□□□□ 0.47
ATN1-201ENST00000356654 RTF1Q92541 710 aaKnown RBP18.01■□□□□ 0.47
ATN1-201ENST00000356654 ERICH6BQ5W0A0 696 aa18■□□□□ 0.47
ATN1-201ENST00000356654 NAIPQ13075 1403 aa18■□□□□ 0.47
ATN1-201ENST00000356654 PLB1Q6P1J6 1458 aa18■□□□□ 0.47
ATN1-201ENST00000356654 PDE3BQ13370 1112 aa17.99■□□□□ 0.47
ATN1-201ENST00000356654 EVC2Q86UK5 1308 aa17.99■□□□□ 0.47
ATN1-201ENST00000356654 SCAPERQ9BY12 1400 aa17.98■□□□□ 0.47
ATN1-201ENST00000356654 PLIN1O60240 522 aa17.98■□□□□ 0.47
ATN1-201ENST00000356654 APAF1O14727 1248 aa17.97■□□□□ 0.47
ATN1-201ENST00000356654 PCF11O94913 1555 aaKnown RBP17.97■□□□□ 0.47
ATN1-201ENST00000356654 DAPK1P53355 1430 aa17.97■□□□□ 0.47
ATN1-201ENST00000356654 RAPGEF3O95398 923 aa17.96■□□□□ 0.47
ATN1-201ENST00000356654 ZBED9Q6R2W3 1325 aa17.96■□□□□ 0.47
ATN1-201ENST00000356654 CHMP4BQ9H444 224 aaKnown RBP17.95■□□□□ 0.46
ATN1-201ENST00000356654 IQGAP2Q13576 1575 aa17.95■□□□□ 0.46
ATN1-201ENST00000356654 CENPJQ9HC77 1338 aaPredicted RBP17.95■□□□□ 0.46
ATN1-201ENST00000356654 TSHZ2Q9NRE2 1034 aa17.95■□□□□ 0.46
ATN1-201ENST00000356654 ANP32BQ92688 251 aaKnown RBP17.95■□□□□ 0.46
ATN1-201ENST00000356654 LTV1Q96GA3 475 aaPredicted RBP17.94■□□□□ 0.46
ATN1-201ENST00000356654 CGNL1Q0VF96 1302 aa17.94■□□□□ 0.46
ATN1-201ENST00000356654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.94■□□□□ 0.461e-9■■■■□ 20.6
ATN1-201ENST00000356654 APBB1O00213 710 aa17.94■□□□□ 0.46
ATN1-201ENST00000356654 KIAA1107Q9UPP5 1409 aa17.94■□□□□ 0.46
ATN1-201ENST00000356654 IPO8O15397 1037 aaKnown RBP17.93■□□□□ 0.46
ATN1-201ENST00000356654 SMC4Q9NTJ3 1288 aa17.93■□□□□ 0.46
ATN1-201ENST00000356654 ITPRIPQ8IWB1 547 aa17.93■□□□□ 0.46
ATN1-201ENST00000356654 BCL2L13Q9BXK5 485 aa17.93■□□□□ 0.46
ATN1-201ENST00000356654 HECW1Q76N89 1606 aa17.93■□□□□ 0.46
ATN1-201ENST00000356654 ANP32EQ9BTT0 268 aa17.93■□□□□ 0.46
ATN1-201ENST00000356654 GRIN2AQ12879 1464 aa17.92■□□□□ 0.46
ATN1-201ENST00000356654 NOP58Q9Y2X3 529 aaKnown RBP17.92■□□□□ 0.46
ATN1-201ENST00000356654 ELL2O00472 640 aaPredicted RBP17.91■□□□□ 0.46
ATN1-201ENST00000356654 STAC3Q96MF2 364 aa17.91■□□□□ 0.46
ATN1-201ENST00000356654 BIVM-ERCC5R4GMW8 1640 aa17.91■□□□□ 0.46
ATN1-201ENST00000356654 CNTLNQ9NXG0 1405 aa17.91■□□□□ 0.46
ATN1-201ENST00000356654 AMPHP49418 695 aa17.91■□□□□ 0.46
ATN1-201ENST00000356654 OS9Q13438 667 aaPredicted RBP17.9■□□□□ 0.46
ATN1-201ENST00000356654 ARHGEF11O15085 1522 aa17.9■□□□□ 0.46
ATN1-201ENST00000356654 CALD1Q05682 793 aaKnown RBP17.89■□□□□ 0.45
ATN1-201ENST00000356654 CABP2Q9NPB3 220 aa17.89■□□□□ 0.45
ATN1-201ENST00000356654 CSB-PGBD3P0DP91 1061 aa17.88■□□□□ 0.45
ATN1-201ENST00000356654 EXOC6Q8TAG9 804 aa17.88■□□□□ 0.45
ATN1-201ENST00000356654 CASC1Q6TDU7 716 aa17.87■□□□□ 0.45
ATN1-201ENST00000356654 WDR97A6NE52 1622 aa17.86■□□□□ 0.45
ATN1-201ENST00000356654 GGNBP2Q9H3C7 697 aa17.86■□□□□ 0.45
ATN1-201ENST00000356654 SUPT6HQ7KZ85 1726 aaKnown RBP17.86■□□□□ 0.45
ATN1-201ENST00000356654 COG3Q96JB2 828 aa17.86■□□□□ 0.45
ATN1-201ENST00000356654 CUL7Q14999 1698 aa17.86■□□□□ 0.45
ATN1-201ENST00000356654 ABCC5O15440 1437 aa17.85■□□□□ 0.45
ATN1-201ENST00000356654 CCDC184Q52MB2 194 aa17.85■□□□□ 0.45
ATN1-201ENST00000356654 RWDD1Q9H446 243 aaPredicted RBP17.85■□□□□ 0.45
ATN1-201ENST00000356654 MAGI1Q96QZ7 1491 aaPredicted RBP17.84■□□□□ 0.45
ATN1-201ENST00000356654 TCERG1O14776 1098 aaKnown RBP17.84■□□□□ 0.45
ATN1-201ENST00000356654 RRP1P56182 461 aaKnown RBP17.83■□□□□ 0.44
ATN1-201ENST00000356654 ADAMTS8Q9UP79 889 aa17.83■□□□□ 0.44
ATN1-201ENST00000356654 ROCK1Q13464 1354 aa17.82■□□□□ 0.44
ATN1-201ENST00000356654 MAP3K1Q13233 1512 aa17.81■□□□□ 0.44
ATN1-201ENST00000356654 TPRNQ4KMQ1 711 aa17.81■□□□□ 0.44
ATN1-201ENST00000356654 SPRYD3Q8NCJ5 442 aa17.81■□□□□ 0.44
ATN1-201ENST00000356654 SLC12A5Q9H2X9 1139 aa17.81■□□□□ 0.44
ATN1-201ENST00000356654 C11orf95C9JLR9 678 aaPredicted RBP17.81■□□□□ 0.44
ATN1-201ENST00000356654 E9PSI1 815 aa17.81■□□□□ 0.44
ATN1-201ENST00000356654 CRBNQ96SW2 442 aa17.8■□□□□ 0.44
ATN1-201ENST00000356654 PLEKHH2Q8IVE3 1493 aa17.8■□□□□ 0.44
ATN1-201ENST00000356654 NCLP19338 710 aaKnown RBP17.8■□□□□ 0.44
ATN1-201ENST00000356654 SLC4A10Q6U841 1118 aa17.8■□□□□ 0.44
ATN1-201ENST00000356654 ANKRD30BQ9BXX2 1392 aa17.79■□□□□ 0.44
ATN1-201ENST00000356654 DIAPH1O60610 1272 aaKnown RBP17.79■□□□□ 0.44
ATN1-201ENST00000356654 COG6Q9Y2V7 657 aa17.79■□□□□ 0.44
ATN1-201ENST00000356654 STK31Q9BXU1 1019 aa17.79■□□□□ 0.44
ATN1-201ENST00000356654 CDCA7LQ96GN5 454 aa17.78■□□□□ 0.44
ATN1-201ENST00000356654 MTHFSP49914 203 aa17.78■□□□□ 0.44
ATN1-201ENST00000356654 NCOA1Q15788 1441 aa17.77■□□□□ 0.43
ATN1-201ENST00000356654 GOLGA6L22H0YM25 854 aa17.76■□□□□ 0.43
ATN1-201ENST00000356654 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.76■□□□□ 0.43
ATN1-201ENST00000356654 ZNF330Q9Y3S2 320 aaPredicted RBP17.76■□□□□ 0.43
ATN1-201ENST00000356654 CAMSAP2Q08AD1 1489 aa17.76■□□□□ 0.43
ATN1-201ENST00000356654 HSP90AB1P08238 724 aaKnown RBP17.76■□□□□ 0.43
ATN1-201ENST00000356654 LMOD3Q0VAK6 560 aa17.76■□□□□ 0.43
ATN1-201ENST00000356654 PMFBP1Q8TBY8 1022 aa17.76■□□□□ 0.43
ATN1-201ENST00000356654 PRAM1Q96QH2 718 aa17.75■□□□□ 0.43
ATN1-201ENST00000356654 PPP2R1AP30153 589 aa17.75■□□□□ 0.43
ATN1-201ENST00000356654 RIPK4P57078 832 aa17.75■□□□□ 0.43
ATN1-201ENST00000356654 PTPN23Q9H3S7 1636 aa17.74■□□□□ 0.43
ATN1-201ENST00000356654 HMOX1P09601 288 aa17.74■□□□□ 0.43
ATN1-201ENST00000356654 KCNJ4P48050 445 aa17.74■□□□□ 0.43
ATN1-201ENST00000356654 PTPRKQ15262 1439 aa17.74■□□□□ 0.43
ATN1-201ENST00000356654 EIF5BO60841 1220 aaKnown RBP17.72■□□□□ 0.43
ATN1-201ENST00000356654 BRD4O60885 1362 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms