RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 CLUAP1Q96AJ1 413 aa18.42■□□□□ 0.54
LMX1B-201ENST00000355497 TSHZ2Q9NRE2 1034 aa18.42■□□□□ 0.54
LMX1B-201ENST00000355497 FOXD1Q16676 465 aa18.42■□□□□ 0.54
LMX1B-201ENST00000355497 RB1CC1Q8TDY2 1594 aa18.41■□□□□ 0.54
LMX1B-201ENST00000355497 CCDC146Q8IYE0 955 aa18.4■□□□□ 0.54
LMX1B-201ENST00000355497 RSPH6AQ9H0K4 717 aa18.4■□□□□ 0.54
LMX1B-201ENST00000355497 TPM2P07951 284 aa18.4■□□□□ 0.54
LMX1B-201ENST00000355497 TERF2IPQ9NYB0 399 aa18.4■□□□□ 0.54
LMX1B-201ENST00000355497 GOLGA6L19H0YKK7 550 aa18.39■□□□□ 0.53
LMX1B-201ENST00000355497 PDE3BQ13370 1112 aa18.39■□□□□ 0.53
LMX1B-201ENST00000355497 GPS2Q13227 327 aa18.39■□□□□ 0.53
LMX1B-201ENST00000355497 CCDC70Q6NSX1 233 aa18.39■□□□□ 0.53
LMX1B-201ENST00000355497 PATL2C9JE40 543 aaKnown RBP18.38■□□□□ 0.53
LMX1B-201ENST00000355497 CCAR2Q8N163 923 aaKnown RBP18.38■□□□□ 0.53
LMX1B-201ENST00000355497 TPM1P09493 284 aa18.38■□□□□ 0.53
LMX1B-201ENST00000355497 CHMP4CQ96CF2 233 aa18.38■□□□□ 0.53
LMX1B-201ENST00000355497 SKOR2Q2VWA4 1001 aaPredicted RBP18.38■□□□□ 0.53
LMX1B-201ENST00000355497 ATP6V1DQ9Y5K8 247 aa18.37■□□□□ 0.53
LMX1B-201ENST00000355497 FRAT2O75474 233 aaPredicted RBP18.37■□□□□ 0.53
LMX1B-201ENST00000355497 FAM184AQ8NB25 1140 aa18.37■□□□□ 0.53
LMX1B-201ENST00000355497 TRHP20396 242 aaPredicted RBP18.36■□□□□ 0.53
LMX1B-201ENST00000355497 CARMIL1Q5VZK9 1371 aa18.36■□□□□ 0.53
LMX1B-201ENST00000355497 BECN2A8MW95 431 aa18.35■□□□□ 0.53
LMX1B-201ENST00000355497 MPHOSPH9Q99550 1183 aa18.35■□□□□ 0.53
LMX1B-201ENST00000355497 CCDC9Q9Y3X0 531 aaKnown RBP18.35■□□□□ 0.53
LMX1B-201ENST00000355497 DDX49Q9Y6V7 483 aaKnown RBP18.35■□□□□ 0.53
LMX1B-201ENST00000355497 NUP155O75694 1391 aa18.34■□□□□ 0.53
LMX1B-201ENST00000355497 PHLDB1Q86UU1 1377 aa18.33■□□□□ 0.53
LMX1B-201ENST00000355497 AKAP17AQ02040 695 aaKnown RBP18.33■□□□□ 0.52
LMX1B-201ENST00000355497 ANO8Q9HCE9 1232 aaPredicted RBP18.33■□□□□ 0.52
LMX1B-201ENST00000355497 RILPL2Q969X0 211 aa18.33■□□□□ 0.52
LMX1B-201ENST00000355497 NLRP13Q86W25 1043 aa18.32■□□□□ 0.52
LMX1B-201ENST00000355497 CENPQQ7L2Z9 268 aaPredicted RBP18.31■□□□□ 0.52
LMX1B-201ENST00000355497 AMPHP49418 695 aa18.31■□□□□ 0.52
LMX1B-201ENST00000355497 ZNF771Q7L3S4 317 aaPredicted RBP18.31■□□□□ 0.52
LMX1B-201ENST00000355497 ANKRD30AQ9BXX3 1397 aa18.3■□□□□ 0.52
LMX1B-201ENST00000355497 FAM161AQ3B820 660 aa18.3■□□□□ 0.52
LMX1B-201ENST00000355497 CUX2O14529 1486 aa18.3■□□□□ 0.52
LMX1B-201ENST00000355497 RAB3GAP2Q9H2M9 1393 aa18.29■□□□□ 0.52
LMX1B-201ENST00000355497 GTF2E1P29083 439 aaPredicted RBP18.29■□□□□ 0.52
LMX1B-201ENST00000355497 GSE1Q14687 1217 aa18.29■□□□□ 0.52
LMX1B-201ENST00000355497 SYNE3Q6ZMZ3 975 aa18.28■□□□□ 0.52
LMX1B-201ENST00000355497 ZNF592Q92610 1267 aa18.28■□□□□ 0.52
LMX1B-201ENST00000355497 NGDNQ8NEJ9 315 aaKnown RBP18.28■□□□□ 0.52
LMX1B-201ENST00000355497 ANKRD45Q5TZF3 282 aa18.27■□□□□ 0.52
LMX1B-201ENST00000355497 FBXO3Q9UK99 471 aa18.27■□□□□ 0.51
LMX1B-201ENST00000355497 MCTP1Q6DN14 999 aa18.27■□□□□ 0.51
LMX1B-201ENST00000355497 VPS8Q8N3P4 1428 aa18.26■□□□□ 0.51
LMX1B-201ENST00000355497 FOXD4L6Q3SYB3 417 aaPredicted RBP18.26■□□□□ 0.51
LMX1B-201ENST00000355497 FOXD4L3Q6VB84 417 aaPredicted RBP18.26■□□□□ 0.51
LMX1B-201ENST00000355497 PCMTD1Q96MG8 357 aaPredicted RBP18.26■□□□□ 0.51
LMX1B-201ENST00000355497 KIF15Q9NS87 1388 aa18.26■□□□□ 0.51
LMX1B-201ENST00000355497 LTV1Q96GA3 475 aaPredicted RBP18.25■□□□□ 0.51
LMX1B-201ENST00000355497 IPO7O95373 1038 aaKnown RBP18.25■□□□□ 0.51
LMX1B-201ENST00000355497 TEX35Q5T0J7 233 aa18.25■□□□□ 0.51
LMX1B-201ENST00000355497 PDE4AP27815 886 aa18.24■□□□□ 0.51
LMX1B-201ENST00000355497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.24■□□□□ 0.51
LMX1B-201ENST00000355497 TRIM29Q14134 588 aa18.24■□□□□ 0.51
LMX1B-201ENST00000355497 VSIG10Q8N0Z9 540 aa18.24■□□□□ 0.51
LMX1B-201ENST00000355497 DIAPH3Q9NSV4 1193 aa18.24■□□□□ 0.51
LMX1B-201ENST00000355497 CCDC47Q96A33 483 aaKnown RBP18.24■□□□□ 0.51
LMX1B-201ENST00000355497 CARMIL2Q6F5E8 1435 aa18.24■□□□□ 0.51
LMX1B-201ENST00000355497 ANKRD20A12PQ8NF67 263 aa18.23■□□□□ 0.51
LMX1B-201ENST00000355497 MYBBP1AQ9BQG0 1328 aaKnown RBP18.23■□□□□ 0.51
LMX1B-201ENST00000355497 FMN1Q68DA7 1419 aa18.23■□□□□ 0.51
LMX1B-201ENST00000355497 LRRFIP1Q32MZ4 808 aaKnown RBP18.23■□□□□ 0.51
LMX1B-201ENST00000355497 TCEAL9Q9UHQ7 104 aa18.22■□□□□ 0.51
LMX1B-201ENST00000355497 RRP7AQ9Y3A4 280 aaKnown RBP18.22■□□□□ 0.51
LMX1B-201ENST00000355497 SLC4A3P48751 1232 aa18.22■□□□□ 0.51
LMX1B-201ENST00000355497 WWC1Q8IX03 1113 aa18.22■□□□□ 0.51
LMX1B-201ENST00000355497 EID1Q9Y6B2 187 aa18.22■□□□□ 0.51
LMX1B-201ENST00000355497 CPLX2Q6PUV4 134 aaKnown RBP18.22■□□□□ 0.51
LMX1B-201ENST00000355497 ZKSCAN2Q63HK3 967 aa18.22■□□□□ 0.51
LMX1B-201ENST00000355497 RRP12Q5JTH9 1297 aaKnown RBP18.21■□□□□ 0.51
LMX1B-201ENST00000355497 EFCAB2Q5VUJ9 269 aa18.21■□□□□ 0.51
LMX1B-201ENST00000355497 AMOTL1Q8IY63 956 aa18.21■□□□□ 0.51
LMX1B-201ENST00000355497 RUFY2Q8WXA3 655 aa18.21■□□□□ 0.51
LMX1B-201ENST00000355497 KANK4Q5T7N3 995 aaPredicted RBP18.2■□□□□ 0.5
LMX1B-201ENST00000355497 HOOK1Q9UJC3 728 aaKnown RBP18.2■□□□□ 0.5
LMX1B-201ENST00000355497 HOMER1Q86YM7 354 aa18.19■□□□□ 0.5
LMX1B-201ENST00000355497 ANO2Q9NQ90 1003 aa18.19■□□□□ 0.5
LMX1B-201ENST00000355497 NOL10Q9BSC4 688 aaKnown RBP18.18■□□□□ 0.5
LMX1B-201ENST00000355497 E9PSI1 815 aa18.18■□□□□ 0.5
LMX1B-201ENST00000355497 SOGA1O94964 1423 aa18.18■□□□□ 0.5
LMX1B-201ENST00000355497 REC8O95072 547 aa18.18■□□□□ 0.5
LMX1B-201ENST00000355497 ZKSCAN1P17029 563 aaPredicted RBP18.18■□□□□ 0.5
LMX1B-201ENST00000355497 NUTM2DQ5VT03 806 aaPredicted RBP18.18■□□□□ 0.5
LMX1B-201ENST00000355497 L3MBTL2Q969R5 705 aa18.18■□□□□ 0.5
LMX1B-201ENST00000355497 C1orf141Q5JVX7 400 aa18.17■□□□□ 0.5
LMX1B-201ENST00000355497 KIF3BO15066 747 aa18.17■□□□□ 0.5
LMX1B-201ENST00000355497 TRIM34Q9BYJ4 488 aa18.17■□□□□ 0.5
LMX1B-201ENST00000355497 RRP1P56182 461 aaKnown RBP18.16■□□□□ 0.5
LMX1B-201ENST00000355497 BCL2L13Q9BXK5 485 aa18.16■□□□□ 0.5
LMX1B-201ENST00000355497 CTDP1Q9Y5B0 961 aaPredicted RBP18.16■□□□□ 0.5
LMX1B-201ENST00000355497 ELL2O00472 640 aaPredicted RBP18.15■□□□□ 0.5
LMX1B-201ENST00000355497 BICD2Q8TD16 824 aa18.15■□□□□ 0.5
LMX1B-201ENST00000355497 CRBNQ96SW2 442 aa18.15■□□□□ 0.5
LMX1B-201ENST00000355497 CPLX1O14810 134 aa18.15■□□□□ 0.5
LMX1B-201ENST00000355497 AK7Q96M32 723 aa18.15■□□□□ 0.5
LMX1B-201ENST00000355497 CDR1P51861 262 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms