RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 RBM42Q9BTD8 480 aaKnown RBP6.47□□□□□ -1.37
CKAP5-202ENST00000354558 FYB1O15117 783 aa6.47□□□□□ -1.37
CKAP5-202ENST00000354558 NRDCO43847 1150 aa6.47□□□□□ -1.37
CKAP5-202ENST00000354558 HDAC5Q9UQL6 1122 aa6.47□□□□□ -1.37
CKAP5-202ENST00000354558 SLC4A10Q6U841 1118 aa6.46□□□□□ -1.37
CKAP5-202ENST00000354558 BEGAINQ9BUH8 593 aa6.46□□□□□ -1.37
CKAP5-202ENST00000354558 NLRP2Q9NX02 1062 aa6.46□□□□□ -1.38
CKAP5-202ENST00000354558 CA8P35219 290 aa6.46□□□□□ -1.38
CKAP5-202ENST00000354558 AKAP17AQ02040 695 aaKnown RBP6.46□□□□□ -1.38
CKAP5-202ENST00000354558 ESCO1Q5FWF5 840 aa6.46□□□□□ -1.38
CKAP5-202ENST00000354558 A0A0U1RQG5 324 aaPredicted RBP6.46□□□□□ -1.38
CKAP5-202ENST00000354558 ERICH6BQ5W0A0 696 aa6.45□□□□□ -1.38
CKAP5-202ENST00000354558 RAPGEF4Q8WZA2 1011 aa6.45□□□□□ -1.38
CKAP5-202ENST00000354558 HSP90AB1P08238 724 aaKnown RBP6.45□□□□□ -1.38
CKAP5-202ENST00000354558 TEFQ10587 303 aa6.45□□□□□ -1.38
CKAP5-202ENST00000354558 CCDC27Q2M243 656 aa6.45□□□□□ -1.38
CKAP5-202ENST00000354558 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.45□□□□□ -1.38
CKAP5-202ENST00000354558 HMGB2P26583 209 aaKnown RBP6.45□□□□□ -1.38
CKAP5-202ENST00000354558 SPRYD3Q8NCJ5 442 aa6.45□□□□□ -1.38
CKAP5-202ENST00000354558 CHMP4BP1P59074 171 aa6.45□□□□□ -1.38
CKAP5-202ENST00000354558 EIF3AQ14152 1382 aaKnown RBP6.45□□□□□ -1.38
CKAP5-202ENST00000354558 HNRNPMP52272 730 aaKnown RBP eCLIP6.45□□□□□ -1.38
CKAP5-202ENST00000354558 CRBNQ96SW2 442 aa6.44□□□□□ -1.38
CKAP5-202ENST00000354558 DMRT2Q9Y5R5 561 aa6.44□□□□□ -1.38
CKAP5-202ENST00000354558 MPHOSPH10O00566 681 aaKnown RBP6.44□□□□□ -1.38
CKAP5-202ENST00000354558 DNTTIP2Q5QJE6 756 aaKnown RBP6.44□□□□□ -1.38
CKAP5-202ENST00000354558 UBAP1LF5GYI3 381 aa6.44□□□□□ -1.38
CKAP5-202ENST00000354558 NUTM2GQ5VZR2 741 aa6.44□□□□□ -1.38
CKAP5-202ENST00000354558 COG3Q96JB2 828 aa6.44□□□□□ -1.38
CKAP5-202ENST00000354558 ADAMTS2O95450 1211 aa6.44□□□□□ -1.38
CKAP5-202ENST00000354558 RFX1P22670 979 aa6.44□□□□□ -1.38
CKAP5-202ENST00000354558 NACADO15069 1562 aa6.44□□□□□ -1.38
CKAP5-202ENST00000354558 WRNQ14191 1432 aaPredicted RBP eCLIP6.44□□□□□ -1.38
CKAP5-202ENST00000354558 U2AF1L5P0DN76 240 aaPredicted RBP6.43□□□□□ -1.38
CKAP5-202ENST00000354558 U2AF1Q01081 240 aaKnown RBP eCLIP6.43□□□□□ -1.381e-17■□□□□ 9
CKAP5-202ENST00000354558 NGLY1Q96IV0 654 aa6.43□□□□□ -1.38
CKAP5-202ENST00000354558 KIF6Q6ZMV9 814 aa6.43□□□□□ -1.38
CKAP5-202ENST00000354558 CUX2O14529 1486 aa6.43□□□□□ -1.38
CKAP5-202ENST00000354558 DRC7Q8IY82 874 aa6.43□□□□□ -1.38
CKAP5-202ENST00000354558 BCL11BQ9C0K0 894 aaPredicted RBP6.43□□□□□ -1.38
CKAP5-202ENST00000354558 SOGA1O94964 1423 aa6.42□□□□□ -1.38
CKAP5-202ENST00000354558 TCERG1O14776 1098 aaKnown RBP6.42□□□□□ -1.38
CKAP5-202ENST00000354558 NEXNQ0ZGT2 675 aa6.42□□□□□ -1.38
CKAP5-202ENST00000354558 CCDC34Q96HJ3 373 aa6.42□□□□□ -1.38
CKAP5-202ENST00000354558 MTMR7Q9Y216 660 aa6.42□□□□□ -1.38
CKAP5-202ENST00000354558 GPRASP1Q5JY77 1395 aa6.42□□□□□ -1.38
CKAP5-202ENST00000354558 EIF2S2P20042 333 aaKnown RBP6.42□□□□□ -1.38
CKAP5-202ENST00000354558 SYNE3Q6ZMZ3 975 aa6.42□□□□□ -1.38
CKAP5-202ENST00000354558 IL27Q8NEV9 243 aa6.42□□□□□ -1.38
CKAP5-202ENST00000354558 TRIM6-TRIM34B2RNG4 842 aa6.42□□□□□ -1.38
CKAP5-202ENST00000354558 APPP05067 770 aa6.42□□□□□ -1.38
CKAP5-202ENST00000354558 TOM1L2Q6ZVM7 507 aa6.42□□□□□ -1.38
CKAP5-202ENST00000354558 SMC4Q9NTJ3 1288 aa6.42□□□□□ -1.38
CKAP5-202ENST00000354558 PLIN1O60240 522 aa6.41□□□□□ -1.38
CKAP5-202ENST00000354558 PES1O00541 588 aaKnown RBP6.41□□□□□ -1.38
CKAP5-202ENST00000354558 ZNF219Q9P2Y4 722 aaPredicted RBP6.41□□□□□ -1.38
CKAP5-202ENST00000354558 POGZQ7Z3K3 1410 aa6.4□□□□□ -1.38
CKAP5-202ENST00000354558 ZNF710Q8N1W2 664 aa6.4□□□□□ -1.38
CKAP5-202ENST00000354558 TDRD9Q8NDG6 1382 aaKnown RBP6.4□□□□□ -1.38
CKAP5-202ENST00000354558 CEP164Q9UPV0 1460 aa6.4□□□□□ -1.38
CKAP5-202ENST00000354558 NBPF8Q3BBV2 869 aa6.4□□□□□ -1.38
CKAP5-202ENST00000354558 NBPF14Q5TI25 921 aa6.4□□□□□ -1.38
CKAP5-202ENST00000354558 TRAK1Q9UPV9 953 aa6.4□□□□□ -1.38
CKAP5-202ENST00000354558 ATP2B2Q01814 1243 aa6.4□□□□□ -1.38
CKAP5-202ENST00000354558 DDX54Q8TDD1 881 aaKnown RBP6.4□□□□□ -1.38
CKAP5-202ENST00000354558 POLD1P28340 1107 aa6.4□□□□□ -1.39
CKAP5-202ENST00000354558 BICDL1Q6ZP65 573 aa6.4□□□□□ -1.39
CKAP5-202ENST00000354558 LMOD3Q0VAK6 560 aa6.39□□□□□ -1.39
CKAP5-202ENST00000354558 BIN2Q9UBW5 565 aaPredicted RBP6.39□□□□□ -1.39
CKAP5-202ENST00000354558 IPO8O15397 1037 aaKnown RBP6.39□□□□□ -1.39
CKAP5-202ENST00000354558 IRX6P78412 446 aaPredicted RBP6.39□□□□□ -1.39
CKAP5-202ENST00000354558 WDR78Q5VTH9 848 aa6.39□□□□□ -1.39
CKAP5-202ENST00000354558 MINK1Q8N4C8 1332 aaPredicted RBP6.39□□□□□ -1.39
CKAP5-202ENST00000354558 ANKLE2Q86XL3 938 aa6.39□□□□□ -1.39
CKAP5-202ENST00000354558 TPM4P67936 248 aa6.39□□□□□ -1.39
CKAP5-202ENST00000354558 ZSCAN29Q8IWY8 852 aaPredicted RBP6.39□□□□□ -1.39
CKAP5-202ENST00000354558 ROCK2O75116 1388 aaKnown RBP6.39□□□□□ -1.39
CKAP5-202ENST00000354558 HTATSF1O43719 755 aaKnown RBP6.38□□□□□ -1.39
CKAP5-202ENST00000354558 TPD52L1Q16890 204 aaPredicted RBP6.38□□□□□ -1.39
CKAP5-202ENST00000354558 ITPRIPQ8IWB1 547 aa6.38□□□□□ -1.39
CKAP5-202ENST00000354558 VTI1AQ96AJ9 217 aa6.38□□□□□ -1.39
CKAP5-202ENST00000354558 JPH4Q96JJ6 628 aa6.38□□□□□ -1.39
CKAP5-202ENST00000354558 TPM2P07951 284 aa6.38□□□□□ -1.39
CKAP5-202ENST00000354558 TXNDC2Q86VQ3 553 aa6.38□□□□□ -1.39
CKAP5-202ENST00000354558 NECTIN2Q92692 538 aa6.38□□□□□ -1.39
CKAP5-202ENST00000354558 CCDC97Q96F63 343 aaPredicted RBP6.38□□□□□ -1.39
CKAP5-202ENST00000354558 CARMIL1Q5VZK9 1371 aa6.38□□□□□ -1.39
CKAP5-202ENST00000354558 ERICH2A1L162 156 aa6.38□□□□□ -1.39
CKAP5-202ENST00000354558 LRRFIP1Q32MZ4 808 aaKnown RBP6.38□□□□□ -1.39
CKAP5-202ENST00000354558 TOM1O60784 492 aa6.38□□□□□ -1.39
CKAP5-202ENST00000354558 DDX58O95786 925 aaKnown RBP6.37□□□□□ -1.39
CKAP5-202ENST00000354558 PKD2Q13563 968 aa6.37□□□□□ -1.39
CKAP5-202ENST00000354558 TMOD2Q9NZR1 351 aa6.37□□□□□ -1.39
CKAP5-202ENST00000354558 THEMISQ8N1K5 641 aaPredicted RBP6.37□□□□□ -1.39
CKAP5-202ENST00000354558 C9orf78Q9NZ63 289 aaPredicted RBP6.37□□□□□ -1.39
CKAP5-202ENST00000354558 ODF2Q5BJF6 829 aa6.37□□□□□ -1.39
CKAP5-202ENST00000354558 PTPRGP23470 1445 aa6.37□□□□□ -1.39
CKAP5-202ENST00000354558 VGFO15240 615 aaPredicted RBP6.36□□□□□ -1.39
CKAP5-202ENST00000354558 RGS3P49796 1198 aa6.36□□□□□ -1.39
CKAP5-202ENST00000354558 STAC3Q96MF2 364 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms