RNA–Protein interactions for RNA: ENST00000351959.9

TNFRSF25-203, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-203ENST00000351959 TRIM52Q96A61 297 aa29.81■■■□□ 2.36
TNFRSF25-203ENST00000351959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.81■■■□□ 2.36
TNFRSF25-203ENST00000351959 PPP6R1Q9UPN7 881 aa29.8■■■□□ 2.36
TNFRSF25-203ENST00000351959 SIGLEC1Q9BZZ2 1709 aa29.8■■■□□ 2.36
TNFRSF25-203ENST00000351959 MLECQ14165 292 aa29.79■■■□□ 2.36
TNFRSF25-203ENST00000351959 NUP155O75694 1391 aa29.77■■■□□ 2.36
TNFRSF25-203ENST00000351959 KANK1Q14678 1352 aa29.76■■■□□ 2.35
TNFRSF25-203ENST00000351959 RNF17Q9BXT8 1623 aaKnown RBP29.75■■■□□ 2.35
TNFRSF25-203ENST00000351959 DEPDC5O75140 1603 aa29.73■■■□□ 2.35
TNFRSF25-203ENST00000351959 UNC13BO14795 1591 aa29.73■■■□□ 2.35
TNFRSF25-203ENST00000351959 WASHC2CQ9Y4E1 1318 aa29.71■■■□□ 2.35
TNFRSF25-203ENST00000351959 PRDM15P57071 1507 aaPredicted RBP29.71■■■□□ 2.35
TNFRSF25-203ENST00000351959 MROH1Q8NDA8 1641 aa29.7■■■□□ 2.35
TNFRSF25-203ENST00000351959 ESF1Q9H501 851 aaKnown RBP29.68■■■□□ 2.34
TNFRSF25-203ENST00000351959 VWDEQ8N2E2 1590 aa29.66■■■□□ 2.34
TNFRSF25-203ENST00000351959 KDM5DQ9BY66 1539 aa29.66■■■□□ 2.34
TNFRSF25-203ENST00000351959 SLC4A1APQ9BWU0 796 aaKnown RBP29.65■■■□□ 2.34
TNFRSF25-203ENST00000351959 MPHOSPH9Q99550 1183 aa29.64■■■□□ 2.34
TNFRSF25-203ENST00000351959 FAM135AQ9P2D6 1515 aa29.63■■■□□ 2.33
TNFRSF25-203ENST00000351959 IQGAP3Q86VI3 1631 aa29.61■■■□□ 2.33
TNFRSF25-203ENST00000351959 PZPP20742 1482 aa29.61■■■□□ 2.33
TNFRSF25-203ENST00000351959 LMTK2Q8IWU2 1503 aa29.6■■■□□ 2.33
TNFRSF25-203ENST00000351959 ABCC3O15438 1527 aa29.59■■■□□ 2.33
TNFRSF25-203ENST00000351959 CNTLNQ9NXG0 1405 aa29.59■■■□□ 2.33
TNFRSF25-203ENST00000351959 PKD2Q13563 968 aa29.56■■■□□ 2.32
TNFRSF25-203ENST00000351959 ZC3H13Q5T200 1668 aaKnown RBP29.55■■■□□ 2.32
TNFRSF25-203ENST00000351959 ADAMTSL3P82987 1691 aa29.53■■■□□ 2.32
TNFRSF25-203ENST00000351959 ZMYM3Q14202 1370 aa29.53■■■□□ 2.32
TNFRSF25-203ENST00000351959 DHX57Q6P158 1386 aaKnown RBP29.52■■■□□ 2.32
TNFRSF25-203ENST00000351959 CEP152O94986 1710 aa29.51■■■□□ 2.31
TNFRSF25-203ENST00000351959 ARHGAP31Q2M1Z3 1444 aa29.51■■■□□ 2.31
TNFRSF25-203ENST00000351959 TET3O43151 1660 aa29.5■■■□□ 2.31
TNFRSF25-203ENST00000351959 CLTCQ00610 1675 aaKnown RBP29.5■■■□□ 2.31
TNFRSF25-203ENST00000351959 EFCAB6Q5THR3 1501 aa29.47■■■□□ 2.31
TNFRSF25-203ENST00000351959 FER1L4A9Z1Z3 1794 aa29.47■■■□□ 2.31
TNFRSF25-203ENST00000351959 MADDQ8WXG6 1647 aa29.46■■■□□ 2.31
TNFRSF25-203ENST00000351959 NPATQ14207 1427 aa29.46■■■□□ 2.31
TNFRSF25-203ENST00000351959 CAMSAP1Q5T5Y3 1602 aa29.46■■■□□ 2.31
TNFRSF25-203ENST00000351959 FOXD1Q16676 465 aa29.45■■■□□ 2.31
TNFRSF25-203ENST00000351959 RPRD2Q5VT52 1461 aaKnown RBP29.45■■■□□ 2.31
TNFRSF25-203ENST00000351959 KDM4FA0A1W2PPD8 638 aa29.44■■■□□ 2.3
TNFRSF25-203ENST00000351959 MROH2AA6NES4 1674 aa29.43■■■□□ 2.3
TNFRSF25-203ENST00000351959 CEBPAP49715 358 aaPredicted RBP29.41■■■□□ 2.3
TNFRSF25-203ENST00000351959 E9PCH4 1651 aa29.4■■■□□ 2.3
TNFRSF25-203ENST00000351959 FBXO31Q5XUX0 539 aaPredicted RBP29.4■■■□□ 2.3
TNFRSF25-203ENST00000351959 RIMS1Q86UR5 1692 aaKnown RBP29.39■■■□□ 2.3
TNFRSF25-203ENST00000351959 CCER1Q8TC90 406 aaPredicted RBP29.38■■■□□ 2.29
TNFRSF25-203ENST00000351959 PTPRTO14522 1441 aa29.36■■■□□ 2.29
TNFRSF25-203ENST00000351959 PTPRMP28827 1452 aa29.35■■■□□ 2.29
TNFRSF25-203ENST00000351959 ANKRD30BQ9BXX2 1392 aa29.35■■■□□ 2.29
TNFRSF25-203ENST00000351959 NOS1P29475 1434 aa29.34■■■□□ 2.29
TNFRSF25-203ENST00000351959 PLPPR3Q6T4P5 718 aa29.34■■■□□ 2.29
TNFRSF25-203ENST00000351959 ERVK-7P63135 1459 aa29.32■■■□□ 2.28
TNFRSF25-203ENST00000351959 C3P01024 1663 aa29.32■■■□□ 2.28
TNFRSF25-203ENST00000351959 CLSPNQ9HAW4 1339 aa29.32■■■□□ 2.28
TNFRSF25-203ENST00000351959 PLA2R1Q13018 1463 aa29.31■■■□□ 2.28
TNFRSF25-203ENST00000351959 SPATA31D1Q6ZQQ2 1576 aa29.28■■■□□ 2.28
TNFRSF25-203ENST00000351959 SLC52A1Q9NWF4 448 aa29.28■■■□□ 2.28
TNFRSF25-203ENST00000351959 PREX1Q8TCU6 1659 aa29.27■■■□□ 2.28
TNFRSF25-203ENST00000351959 CFAP65Q6ZU64 1925 aaKnown RBP29.26■■■□□ 2.28
TNFRSF25-203ENST00000351959 TNRQ92752 1358 aa29.26■■■□□ 2.27
TNFRSF25-203ENST00000351959 TRPM2O94759 1503 aa29.25■■■□□ 2.27
TNFRSF25-203ENST00000351959 SPHKAPQ2M3C7 1700 aa29.24■■■□□ 2.27
TNFRSF25-203ENST00000351959 CCDC144AA2RUR9 1427 aa29.24■■■□□ 2.27
TNFRSF25-203ENST00000351959 IDI1Q13907 227 aa29.22■■■□□ 2.27
TNFRSF25-203ENST00000351959 SYNMO15061 1565 aa29.2■■■□□ 2.27
TNFRSF25-203ENST00000351959 SIN3AQ96ST3 1273 aa29.2■■■□□ 2.26
TNFRSF25-203ENST00000351959 NEUROD1Q13562 356 aa29.15■■■□□ 2.26
TNFRSF25-203ENST00000351959 NLRP1Q9C000 1473 aa29.15■■■□□ 2.26
TNFRSF25-203ENST00000351959 UGGT1Q9NYU2 1555 aa29.14■■■□□ 2.26
TNFRSF25-203ENST00000351959 SETD1BQ9UPS6 1966 aaKnown RBP29.13■■■□□ 2.25
TNFRSF25-203ENST00000351959 PIK3C2BO00750 1634 aa29.13■■■□□ 2.25
TNFRSF25-203ENST00000351959 CLTCL1P53675 1640 aa29.12■■■□□ 2.25
TNFRSF25-203ENST00000351959 CHGAP10645 457 aaKnown RBP29.11■■■□□ 2.25
TNFRSF25-203ENST00000351959 STAG3Q9UJ98 1225 aa29.11■■■□□ 2.25
TNFRSF25-203ENST00000351959 UHRF1BP1Q6BDS2 1440 aa29.05■■■□□ 2.24
TNFRSF25-203ENST00000351959 A2ML1A8K2U0 1454 aa29.05■■■□□ 2.24
TNFRSF25-203ENST00000351959 SPATA31E1Q6ZUB1 1445 aa29.04■■■□□ 2.24
TNFRSF25-203ENST00000351959 RGL3Q3MIN7 710 aa29.03■■■□□ 2.24
TNFRSF25-203ENST00000351959 MYO3AQ8NEV4 1616 aa29.03■■■□□ 2.24
TNFRSF25-203ENST00000351959 THEMISQ8N1K5 641 aaPredicted RBP29.02■■■□□ 2.24
TNFRSF25-203ENST00000351959 TIMELESSQ9UNS1 1208 aa29.02■■■□□ 2.24
TNFRSF25-203ENST00000351959 ZNF326Q5BKZ1 582 aaKnown RBP29.01■■■□□ 2.23
TNFRSF25-203ENST00000351959 KIF1BO60333 1816 aa29■■■□□ 2.23
TNFRSF25-203ENST00000351959 NEURL4Q96JN8 1562 aa29■■■□□ 2.23
TNFRSF25-203ENST00000351959 TMEM131LA2VDJ0 1609 aa28.99■■■□□ 2.23
TNFRSF25-203ENST00000351959 ADGRB3O60242 1522 aa28.99■■■□□ 2.23
TNFRSF25-203ENST00000351959 CEP170BQ9Y4F5 1589 aaPredicted RBP28.99■■■□□ 2.23
TNFRSF25-203ENST00000351959 RPGRIP1LQ68CZ1 1315 aa28.98■■■□□ 2.23
TNFRSF25-203ENST00000351959 TONSLQ96HA7 1378 aa28.98■■■□□ 2.23
TNFRSF25-203ENST00000351959 KDM5AP29375 1690 aaKnown RBP28.97■■■□□ 2.23
TNFRSF25-203ENST00000351959 L3MBTL2Q969R5 705 aa28.95■■■□□ 2.23
TNFRSF25-203ENST00000351959 HDGFP51858 240 aaKnown RBP28.94■■■□□ 2.22
TNFRSF25-203ENST00000351959 UBR1Q8IWV7 1749 aa28.93■■■□□ 2.22
TNFRSF25-203ENST00000351959 ZNF142P52746 1687 aaPredicted RBP28.93■■■□□ 2.22
TNFRSF25-203ENST00000351959 STAC3Q96MF2 364 aa28.93■■■□□ 2.22
TNFRSF25-203ENST00000351959 DCAF11Q8TEB1 546 aa28.92■■■□□ 2.22
TNFRSF25-203ENST00000351959 TMEM2Q9UHN6 1383 aa28.91■■■□□ 2.22
TNFRSF25-203ENST00000351959 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.89■■■□□ 2.22
TNFRSF25-203ENST00000351959 VGFO15240 615 aaPredicted RBP28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms