RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 DNMT1P26358 1616 aaKnown RBP20.69■□□□□ 0.9
LRP8-202ENST00000347547 FRAT1Q92837 279 aaPredicted RBP20.67■□□□□ 0.9
LRP8-202ENST00000347547 ERCC6L2Q5T890 1561 aa20.66■□□□□ 0.9
LRP8-202ENST00000347547 PZPP20742 1482 aa20.66■□□□□ 0.9
LRP8-202ENST00000347547 UHRF1BP1Q6BDS2 1440 aa20.66■□□□□ 0.9
LRP8-202ENST00000347547 SLC4A1APQ9BWU0 796 aaKnown RBP20.66■□□□□ 0.9
LRP8-202ENST00000347547 INSRP06213 1382 aa20.66■□□□□ 0.9
LRP8-202ENST00000347547 RSPH6AQ9H0K4 717 aa20.65■□□□□ 0.9
LRP8-202ENST00000347547 RALGAPBQ86X10 1494 aa20.65■□□□□ 0.9
LRP8-202ENST00000347547 ABCC5O15440 1437 aa20.64■□□□□ 0.9
LRP8-202ENST00000347547 ADCY10Q96PN6 1610 aa20.64■□□□□ 0.9
LRP8-202ENST00000347547 E9PCH4 1651 aa20.64■□□□□ 0.89
LRP8-202ENST00000347547 ZMYM4Q5VZL5 1548 aa20.64■□□□□ 0.89
LRP8-202ENST00000347547 FAM43AQ8N2R8 423 aa20.64■□□□□ 0.89
LRP8-202ENST00000347547 ARID3CA6NKF2 412 aa20.63■□□□□ 0.89
LRP8-202ENST00000347547 KIAA1107Q9UPP5 1409 aa20.61■□□□□ 0.89
LRP8-202ENST00000347547 CNGB1Q14028 1251 aaPredicted RBP20.59■□□□□ 0.89
LRP8-202ENST00000347547 POLR3GLQ9BT43 218 aa20.59■□□□□ 0.89
LRP8-202ENST00000347547 TROQ12816 1431 aaPredicted RBP20.58■□□□□ 0.88
LRP8-202ENST00000347547 SENP3-EIF4A1A0A087X0R7 540 aa20.58■□□□□ 0.88
LRP8-202ENST00000347547 ATP10BO94823 1461 aa20.57■□□□□ 0.88
LRP8-202ENST00000347547 NLRP13Q86W25 1043 aa20.57■□□□□ 0.88
LRP8-202ENST00000347547 KDM2BQ8NHM5 1336 aa20.57■□□□□ 0.88
LRP8-202ENST00000347547 PTPRGP23470 1445 aa20.56■□□□□ 0.88
LRP8-202ENST00000347547 ARHGEF12Q9NZN5 1544 aa20.56■□□□□ 0.88
LRP8-202ENST00000347547 DAXXQ9UER7 740 aaPredicted RBP20.56■□□□□ 0.88
LRP8-202ENST00000347547 PARD3Q8TEW0 1356 aa20.56■□□□□ 0.88
LRP8-202ENST00000347547 EIF5BO60841 1220 aaKnown RBP20.54■□□□□ 0.88
LRP8-202ENST00000347547 PLEKHH2Q8IVE3 1493 aa20.54■□□□□ 0.88
LRP8-202ENST00000347547 BLMP54132 1417 aaPredicted RBP20.53■□□□□ 0.88
LRP8-202ENST00000347547 CRBNQ96SW2 442 aa20.53■□□□□ 0.88
LRP8-202ENST00000347547 FAM161AQ3B820 660 aa20.51■□□□□ 0.87
LRP8-202ENST00000347547 CENPQQ7L2Z9 268 aaPredicted RBP20.51■□□□□ 0.87
LRP8-202ENST00000347547 ITSN2Q9NZM3 1697 aa20.5■□□□□ 0.87
LRP8-202ENST00000347547 ZNF644Q9H582 1327 aaPredicted RBP20.49■□□□□ 0.87
LRP8-202ENST00000347547 SLC4A3P48751 1232 aa20.49■□□□□ 0.87
LRP8-202ENST00000347547 ADGBQ8N7X0 1667 aa20.49■□□□□ 0.87
LRP8-202ENST00000347547 ABCC2Q92887 1545 aa20.48■□□□□ 0.87
LRP8-202ENST00000347547 C8orf34Q49A92 452 aa20.48■□□□□ 0.87
LRP8-202ENST00000347547 CDCA7LQ96GN5 454 aa20.48■□□□□ 0.87
LRP8-202ENST00000347547 ADGRL2O95490 1459 aa20.48■□□□□ 0.87
LRP8-202ENST00000347547 CARD11Q9BXL7 1154 aa20.48■□□□□ 0.87
LRP8-202ENST00000347547 CDC42BPAQ5VT25 1732 aa20.47■□□□□ 0.87
LRP8-202ENST00000347547 ABCC10Q5T3U5 1492 aa20.47■□□□□ 0.87
LRP8-202ENST00000347547 PLIN1O60240 522 aa20.46■□□□□ 0.87
LRP8-202ENST00000347547 FRAT2O75474 233 aaPredicted RBP20.46■□□□□ 0.87
LRP8-202ENST00000347547 ZNF326Q5BKZ1 582 aaKnown RBP20.46■□□□□ 0.87
LRP8-202ENST00000347547 SKAP1Q86WV1 359 aa20.45■□□□□ 0.86
LRP8-202ENST00000347547 DCAF11Q8TEB1 546 aa20.45■□□□□ 0.86
LRP8-202ENST00000347547 GPATCH8Q9UKJ3 1502 aaKnown RBP20.44■□□□□ 0.86
LRP8-202ENST00000347547 ST20-MTHFSA0A0A6YYL1 179 aa20.43■□□□□ 0.86
LRP8-202ENST00000347547 UHRF1BP1LA0JNW5 1464 aa20.42■□□□□ 0.86
LRP8-202ENST00000347547 PKD2Q13563 968 aa20.41■□□□□ 0.86
LRP8-202ENST00000347547 PER1O15534 1290 aaPredicted RBP20.38■□□□□ 0.85
LRP8-202ENST00000347547 ZCCHC11Q5TAX3 1644 aaKnown RBP20.38■□□□□ 0.85
LRP8-202ENST00000347547 CROCC2H7BZ55 1655 aa20.38■□□□□ 0.85
LRP8-202ENST00000347547 CAMSAP2Q08AD1 1489 aa20.37■□□□□ 0.85
LRP8-202ENST00000347547 C20orf194Q5TEA3 1177 aa20.37■□□□□ 0.85
LRP8-202ENST00000347547 KDM5DQ9BY66 1539 aa20.35■□□□□ 0.85
LRP8-202ENST00000347547 CDC42BPBQ9Y5S2 1711 aa20.34■□□□□ 0.85
LRP8-202ENST00000347547 PLEKHD1A6NEE1 506 aa20.34■□□□□ 0.85
LRP8-202ENST00000347547 L1TD1Q5T7N2 865 aaKnown RBP20.34■□□□□ 0.85
LRP8-202ENST00000347547 PREX2Q70Z35 1606 aa20.34■□□□□ 0.85
LRP8-202ENST00000347547 VIRMAQ69YN4 1812 aaKnown RBP20.32■□□□□ 0.84
LRP8-202ENST00000347547 ANKRD30AQ9BXX3 1397 aa20.32■□□□□ 0.84
LRP8-202ENST00000347547 TTC37Q6PGP7 1564 aa20.31■□□□□ 0.84
LRP8-202ENST00000347547 ANKRD50Q9ULJ7 1429 aa20.3■□□□□ 0.84
LRP8-202ENST00000347547 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.3■□□□□ 0.84
LRP8-202ENST00000347547 CFDP1Q9UEE9 299 aaPredicted RBP20.3■□□□□ 0.84
LRP8-202ENST00000347547 GLIPR1L2Q4G1C9 344 aa20.3■□□□□ 0.84
LRP8-202ENST00000347547 RRAGDQ9NQL2 400 aaPredicted RBP20.3■□□□□ 0.84
LRP8-202ENST00000347547 COL17A1Q9UMD9 1497 aaPredicted RBP20.3■□□□□ 0.84
LRP8-202ENST00000347547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.29■□□□□ 0.843e-6■■■■■ 36
LRP8-202ENST00000347547 TRPM1Q7Z4N2 1603 aa20.28■□□□□ 0.84
LRP8-202ENST00000347547 DUSP27Q5VZP5 1158 aa20.28■□□□□ 0.84
LRP8-202ENST00000347547 POGKQ9P215 609 aa20.28■□□□□ 0.84
LRP8-202ENST00000347547 EIF3AQ14152 1382 aaKnown RBP20.28■□□□□ 0.84
LRP8-202ENST00000347547 LAMC1P11047 1609 aa20.27■□□□□ 0.84
LRP8-202ENST00000347547 USP19O94966 1318 aa20.27■□□□□ 0.84
LRP8-202ENST00000347547 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.83
LRP8-202ENST00000347547 GPRASP1Q5JY77 1395 aa20.27■□□□□ 0.83
LRP8-202ENST00000347547 ZNF521Q96K83 1311 aa20.26■□□□□ 0.83
LRP8-202ENST00000347547 PKNOX2Q96KN3 472 aa20.26■□□□□ 0.83
LRP8-202ENST00000347547 SAMD9LQ8IVG5 1584 aa20.25■□□□□ 0.83
LRP8-202ENST00000347547 SHANK2Q9UPX8 1470 aa20.25■□□□□ 0.83
LRP8-202ENST00000347547 MYO5CQ9NQX4 1742 aa20.24■□□□□ 0.83
LRP8-202ENST00000347547 PRAG1Q86YV5 1406 aa20.24■□□□□ 0.83
LRP8-202ENST00000347547 BECN1Q14457 450 aa20.24■□□□□ 0.83
LRP8-202ENST00000347547 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
LRP8-202ENST00000347547 ARHGEF5Q12774 1597 aa20.23■□□□□ 0.83
LRP8-202ENST00000347547 NUP155O75694 1391 aa20.23■□□□□ 0.83
LRP8-202ENST00000347547 PLEKHH1Q9ULM0 1364 aa20.22■□□□□ 0.83
LRP8-202ENST00000347547 RGS3P49796 1198 aa20.21■□□□□ 0.83
LRP8-202ENST00000347547 KDM2AQ9Y2K7 1162 aa20.21■□□□□ 0.83
LRP8-202ENST00000347547 PRDM15P57071 1507 aaPredicted RBP20.2■□□□□ 0.82
LRP8-202ENST00000347547 NLRP1Q9C000 1473 aa20.19■□□□□ 0.82
LRP8-202ENST00000347547 ANTXR1Q9H6X2 564 aa20.19■□□□□ 0.82
LRP8-202ENST00000347547 GOLGA2Q08379 1002 aa20.19■□□□□ 0.82
LRP8-202ENST00000347547 CC2D1BQ5T0F9 858 aaKnown RBP20.19■□□□□ 0.82
LRP8-202ENST00000347547 ADAMTS8Q9UP79 889 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms