RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 PSME1Q06323 249 aa15.3■□□□□ 0.04
TRIOBP-202ENST00000344404 TPD52L1Q16890 204 aaPredicted RBP15.3■□□□□ 0.04
TRIOBP-202ENST00000344404 PPP4R2Q9NY27 417 aa15.3■□□□□ 0.04
TRIOBP-202ENST00000344404 ROCK2O75116 1388 aaKnown RBP15.3■□□□□ 0.04
TRIOBP-202ENST00000344404 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
TRIOBP-202ENST00000344404 C1orf141Q5JVX7 400 aa15.28■□□□□ 0.04
TRIOBP-202ENST00000344404 CEP162Q5TB80 1403 aa15.28■□□□□ 0.04
TRIOBP-202ENST00000344404 EIF2S2P20042 333 aaKnown RBP15.28■□□□□ 0.04
TRIOBP-202ENST00000344404 SLC4A3P48751 1232 aa15.28■□□□□ 0.04
TRIOBP-202ENST00000344404 ELL2O00472 640 aaPredicted RBP15.27■□□□□ 0.03
TRIOBP-202ENST00000344404 CCAR2Q8N163 923 aaKnown RBP15.27■□□□□ 0.03
TRIOBP-202ENST00000344404 TDRD9Q8NDG6 1382 aaKnown RBP15.26■□□□□ 0.03
TRIOBP-202ENST00000344404 FAM69CQ0P6D2 419 aa15.26■□□□□ 0.03
TRIOBP-202ENST00000344404 SMC4Q9NTJ3 1288 aa15.26■□□□□ 0.03
TRIOBP-202ENST00000344404 SF3B2Q13435 895 aaKnown RBP15.26■□□□□ 0.03
TRIOBP-202ENST00000344404 IPO8O15397 1037 aaKnown RBP15.26■□□□□ 0.03
TRIOBP-202ENST00000344404 FYB1O15117 783 aa15.26■□□□□ 0.03
TRIOBP-202ENST00000344404 DHX16O60231 1041 aaKnown RBP15.26■□□□□ 0.03
TRIOBP-202ENST00000344404 VPS37DQ86XT2 251 aa15.26■□□□□ 0.03
TRIOBP-202ENST00000344404 MTMR7Q9Y216 660 aa15.26■□□□□ 0.03
TRIOBP-202ENST00000344404 HTATSF1O43719 755 aaKnown RBP15.26■□□□□ 0.03
TRIOBP-202ENST00000344404 TPM3P06753 285 aa15.25■□□□□ 0.03
TRIOBP-202ENST00000344404 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.25■□□□□ 0.032e-6■■■■■ 96.1
TRIOBP-202ENST00000344404 PRDM2Q13029 1718 aa15.25■□□□□ 0.03
TRIOBP-202ENST00000344404 RRP7AQ9Y3A4 280 aaKnown RBP15.25■□□□□ 0.03
TRIOBP-202ENST00000344404 RILPL2Q969X0 211 aa15.25■□□□□ 0.03
TRIOBP-202ENST00000344404 SF3A1Q15459 793 aaKnown RBP15.24■□□□□ 0.03
TRIOBP-202ENST00000344404 ATF3P18847 181 aa15.23■□□□□ 0.03
TRIOBP-202ENST00000344404 EFCAB2Q5VUJ9 269 aa15.22■□□□□ 0.03
TRIOBP-202ENST00000344404 CARMIL2Q6F5E8 1435 aa15.22■□□□□ 0.03
TRIOBP-202ENST00000344404 KDM4AO75164 1064 aa15.21■□□□□ 0.03
TRIOBP-202ENST00000344404 CCDC34Q96HJ3 373 aa15.21■□□□□ 0.03
TRIOBP-202ENST00000344404 PCMTD1Q96MG8 357 aaPredicted RBP15.21■□□□□ 0.03
TRIOBP-202ENST00000344404 CARMIL1Q5VZK9 1371 aa15.21■□□□□ 0.03
TRIOBP-202ENST00000344404 FOSBP53539 338 aa15.21■□□□□ 0.03
TRIOBP-202ENST00000344404 SMARCA2P51531 1590 aa15.2■□□□□ 0.02
TRIOBP-202ENST00000344404 STRN4Q9NRL3 753 aa15.2■□□□□ 0.02
TRIOBP-202ENST00000344404 MINK1Q8N4C8 1332 aaPredicted RBP15.2■□□□□ 0.02
TRIOBP-202ENST00000344404 PLIN1O60240 522 aa15.2■□□□□ 0.02
TRIOBP-202ENST00000344404 APPP05067 770 aa15.2■□□□□ 0.02
TRIOBP-202ENST00000344404 NOL10Q9BSC4 688 aaKnown RBP15.2■□□□□ 0.02
TRIOBP-202ENST00000344404 H3BQV1 296 aa15.19■□□□□ 0.02
TRIOBP-202ENST00000344404 IBSPP21815 317 aaPredicted RBP15.19■□□□□ 0.02
TRIOBP-202ENST00000344404 IFFO2Q5TF58 517 aa15.19■□□□□ 0.02
TRIOBP-202ENST00000344404 BCL11BQ9C0K0 894 aaPredicted RBP15.19■□□□□ 0.02
TRIOBP-202ENST00000344404 NUP155O75694 1391 aa15.19■□□□□ 0.02
TRIOBP-202ENST00000344404 AKAP17AQ02040 695 aaKnown RBP15.19■□□□□ 0.02
TRIOBP-202ENST00000344404 MCTP1Q6DN14 999 aa15.19■□□□□ 0.02
TRIOBP-202ENST00000344404 GBP4Q96PP9 640 aa15.19■□□□□ 0.02
TRIOBP-202ENST00000344404 TTC5Q8N0Z6 440 aa15.18■□□□□ 0.02
TRIOBP-202ENST00000344404 KAT6BQ8WYB5 2073 aa15.18■□□□□ 0.02
TRIOBP-202ENST00000344404 CCDC180Q9P1Z9 1646 aa15.17■□□□□ 0.02
TRIOBP-202ENST00000344404 HSPA5P11021 654 aaKnown RBP15.17■□□□□ 0.02
TRIOBP-202ENST00000344404 CALD1Q05682 793 aaKnown RBP15.17■□□□□ 0.02
TRIOBP-202ENST00000344404 TSR1Q2NL82 804 aaKnown RBP15.17■□□□□ 0.02
TRIOBP-202ENST00000344404 KTN1Q86UP2 1357 aaKnown RBP15.16■□□□□ 0.02
TRIOBP-202ENST00000344404 TCERG1O14776 1098 aaKnown RBP15.16■□□□□ 0.02
TRIOBP-202ENST00000344404 RBM33Q96EV2 1170 aaKnown RBP15.16■□□□□ 0.02
TRIOBP-202ENST00000344404 SOGA1O94964 1423 aa15.16■□□□□ 0.02
TRIOBP-202ENST00000344404 SYAP1Q96A49 352 aaPredicted RBP15.16■□□□□ 0.02
TRIOBP-202ENST00000344404 BCL2L13Q9BXK5 485 aa15.15■□□□□ 0.02
TRIOBP-202ENST00000344404 KIF16BQ96L93 1317 aa15.15■□□□□ 0.02
TRIOBP-202ENST00000344404 CCAR1Q8IX12 1150 aaKnown RBP15.15■□□□□ 0.02
TRIOBP-202ENST00000344404 TERF2IPQ9NYB0 399 aa15.15■□□□□ 0.02
TRIOBP-202ENST00000344404 RWDD1Q9H446 243 aaPredicted RBP15.14■□□□□ 0.01
TRIOBP-202ENST00000344404 FAM184AQ8NB25 1140 aa15.14■□□□□ 0.01
TRIOBP-202ENST00000344404 AMOTL1Q8IY63 956 aa15.14■□□□□ 0.01
TRIOBP-202ENST00000344404 OSCARQ8IYS5 282 aa15.14■□□□□ 0.01
TRIOBP-202ENST00000344404 TPM2P07951 284 aa15.13■□□□□ 0.01
TRIOBP-202ENST00000344404 DEKP35659 375 aaKnown RBP15.13■□□□□ 0.01
TRIOBP-202ENST00000344404 PAF1Q8N7H5 531 aa15.13■□□□□ 0.01
TRIOBP-202ENST00000344404 SETQ01105 290 aaPredicted RBP15.13■□□□□ 0.01
TRIOBP-202ENST00000344404 CCDC43Q96MW1 224 aaKnown RBP15.13■□□□□ 0.01
TRIOBP-202ENST00000344404 DCAF1Q9Y4B6 1507 aa15.13■□□□□ 0.01
TRIOBP-202ENST00000344404 AIMP1Q12904 312 aaKnown RBP15.12■□□□□ 0.01
TRIOBP-202ENST00000344404 CCDC27Q2M243 656 aa15.12■□□□□ 0.01
TRIOBP-202ENST00000344404 CFAP44Q96MT7 982 aa15.12■□□□□ 0.01
TRIOBP-202ENST00000344404 VSIG10Q8N0Z9 540 aa15.12■□□□□ 0.01
TRIOBP-202ENST00000344404 TEFQ10587 303 aa15.11■□□□□ 0.01
TRIOBP-202ENST00000344404 ABCC8Q09428 1581 aa15.11■□□□□ 0.01
TRIOBP-202ENST00000344404 HMMRO75330 724 aa15.11■□□□□ 0.01
TRIOBP-202ENST00000344404 RCAN3Q9UKA8 241 aa15.11■□□□□ 0.01
TRIOBP-202ENST00000344404 PAXIP1Q6ZW49 1069 aaPredicted RBP15.1■□□□□ 0.01
TRIOBP-202ENST00000344404 COG3Q96JB2 828 aa15.1■□□□□ 0.01
TRIOBP-202ENST00000344404 PTMSP20962 102 aa15.09■□□□□ 0.01
TRIOBP-202ENST00000344404 IKQ13123 557 aaPredicted RBP15.09■□□□□ 0.01
TRIOBP-202ENST00000344404 ZFYVE27Q5T4F4 411 aa15.09■□□□□ 0.01
TRIOBP-202ENST00000344404 SYNE3Q6ZMZ3 975 aa15.09■□□□□ 0.01
TRIOBP-202ENST00000344404 CSPP1Q1MSJ5 1256 aa15.08■□□□□ 0
TRIOBP-202ENST00000344404 ZNF592Q92610 1267 aa15.08■□□□□ 0
TRIOBP-202ENST00000344404 ARHGAP35Q9NRY4 1499 aa15.08■□□□□ 0
TRIOBP-202ENST00000344404 STK11IPQ8N1F8 1099 aa15.08■□□□□ 0
TRIOBP-202ENST00000344404 PDS5BQ9NTI5 1447 aa15.08■□□□□ 0
TRIOBP-202ENST00000344404 EEA1Q15075 1411 aa15.07■□□□□ 0
TRIOBP-202ENST00000344404 TMEM132AQ24JP5 1023 aa15.07■□□□□ 0
TRIOBP-202ENST00000344404 ODF2Q5BJF6 829 aa15.07■□□□□ 0
TRIOBP-202ENST00000344404 RRP12Q5JTH9 1297 aaKnown RBP15.07■□□□□ 0
TRIOBP-202ENST00000344404 C9orf78Q9NZ63 289 aaPredicted RBP15.07■□□□□ 0
TRIOBP-202ENST00000344404 NACADO15069 1562 aa15.06■□□□□ 0
TRIOBP-202ENST00000344404 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms