RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 PREX1Q8TCU6 1659 aa34.57■■■■□ 3.13
PBX1-201ENST00000340699 ANKRD30AQ9BXX3 1397 aa34.56■■■■□ 3.12
PBX1-201ENST00000340699 WASHC2CQ9Y4E1 1318 aa34.55■■■■□ 3.12
PBX1-201ENST00000340699 EIF2AK4Q9P2K8 1649 aaKnown RBP34.54■■■■□ 3.12
PBX1-201ENST00000340699 UHRF1BP1Q6BDS2 1440 aa34.53■■■■□ 3.12
PBX1-201ENST00000340699 HSPA2P54652 639 aa34.52■■■■□ 3.12
PBX1-201ENST00000340699 FAM135AQ9P2D6 1515 aa34.51■■■■□ 3.12
PBX1-201ENST00000340699 NPATQ14207 1427 aa34.5■■■■□ 3.11
PBX1-201ENST00000340699 KDM5DQ9BY66 1539 aa34.5■■■■□ 3.11
PBX1-201ENST00000340699 RNF17Q9BXT8 1623 aaKnown RBP34.48■■■■□ 3.11
PBX1-201ENST00000340699 ERBINQ96RT1 1412 aa34.47■■■■□ 3.11
PBX1-201ENST00000340699 NCOA1Q15788 1441 aa34.47■■■■□ 3.11
PBX1-201ENST00000340699 PTPRKQ15262 1439 aa34.43■■■■□ 3.1
PBX1-201ENST00000340699 ADGRL2O95490 1459 aa34.43■■■■□ 3.1
PBX1-201ENST00000340699 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.39■■■■□ 3.1
PBX1-201ENST00000340699 ZC3H13Q5T200 1668 aaKnown RBP34.37■■■■□ 3.09
PBX1-201ENST00000340699 ITGAEP38570 1179 aa34.36■■■■□ 3.09
PBX1-201ENST00000340699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.35■■■■□ 3.09
PBX1-201ENST00000340699 ABCC3O15438 1527 aa34.35■■■■□ 3.09
PBX1-201ENST00000340699 PZPP20742 1482 aa34.34■■■■□ 3.09
PBX1-201ENST00000340699 MROH1Q8NDA8 1641 aa34.34■■■■□ 3.09
PBX1-201ENST00000340699 FBXO31Q5XUX0 539 aaPredicted RBP34.32■■■■□ 3.08
PBX1-201ENST00000340699 KANK1Q14678 1352 aa34.32■■■■□ 3.08
PBX1-201ENST00000340699 PRDM15P57071 1507 aaPredicted RBP34.3■■■■□ 3.08
PBX1-201ENST00000340699 RRBP1Q9P2E9 1410 aaKnown RBP34.29■■■■□ 3.08
PBX1-201ENST00000340699 ANKRD50Q9ULJ7 1429 aa34.29■■■■□ 3.08
PBX1-201ENST00000340699 ROCK1Q13464 1354 aa34.28■■■■□ 3.08
PBX1-201ENST00000340699 MYO3AQ8NEV4 1616 aa34.28■■■■□ 3.08
PBX1-201ENST00000340699 CEP152O94986 1710 aa34.27■■■■□ 3.08
PBX1-201ENST00000340699 DEPDC5O75140 1603 aa34.27■■■■□ 3.08
PBX1-201ENST00000340699 TNRQ92752 1358 aa34.27■■■■□ 3.08
PBX1-201ENST00000340699 CAMSAP1Q5T5Y3 1602 aa34.23■■■■□ 3.07
PBX1-201ENST00000340699 CEP170BQ9Y4F5 1589 aaPredicted RBP34.21■■■■□ 3.07
PBX1-201ENST00000340699 DMRT2Q9Y5R5 561 aa34.21■■■■□ 3.07
PBX1-201ENST00000340699 ZNF142P52746 1687 aaPredicted RBP34.21■■■■□ 3.07
PBX1-201ENST00000340699 A2ML1A8K2U0 1454 aa34.18■■■■□ 3.06
PBX1-201ENST00000340699 STRCQ7RTU9 1775 aa34.16■■■■□ 3.06
PBX1-201ENST00000340699 ARHGAP31Q2M1Z3 1444 aa34.15■■■■□ 3.06
PBX1-201ENST00000340699 SPATA31D1Q6ZQQ2 1576 aa34.14■■■■□ 3.06
PBX1-201ENST00000340699 ERVK-7P63135 1459 aa34.14■■■■□ 3.06
PBX1-201ENST00000340699 VWDEQ8N2E2 1590 aa34.13■■■■□ 3.05
PBX1-201ENST00000340699 NLRP1Q9C000 1473 aa34.13■■■■□ 3.05
PBX1-201ENST00000340699 CFAP65Q6ZU64 1925 aaKnown RBP34.12■■■■□ 3.05
PBX1-201ENST00000340699 LMTK2Q8IWU2 1503 aa34.12■■■■□ 3.05
PBX1-201ENST00000340699 PLA2R1Q13018 1463 aa34.07■■■■□ 3.04
PBX1-201ENST00000340699 PKD2Q13563 968 aa34.05■■■■□ 3.04
PBX1-201ENST00000340699 THEMISQ8N1K5 641 aaPredicted RBP34.05■■■■□ 3.04
PBX1-201ENST00000340699 PTPRTO14522 1441 aa34.04■■■■□ 3.04
PBX1-201ENST00000340699 NCKAP5LQ9HCH0 1330 aa34.04■■■■□ 3.04
PBX1-201ENST00000340699 UNC13BO14795 1591 aa34.03■■■■□ 3.04
PBX1-201ENST00000340699 UGGT1Q9NYU2 1555 aa34.02■■■■□ 3.04
PBX1-201ENST00000340699 EFCAB6Q5THR3 1501 aa34■■■■□ 3.03
PBX1-201ENST00000340699 TET3O43151 1660 aa33.96■■■■□ 3.03
PBX1-201ENST00000340699 NUP155O75694 1391 aa33.96■■■■□ 3.03
PBX1-201ENST00000340699 RPRD2Q5VT52 1461 aaKnown RBP33.94■■■■□ 3.02
PBX1-201ENST00000340699 ANKLE2Q86XL3 938 aa33.93■■■■□ 3.02
PBX1-201ENST00000340699 NAIPQ13075 1403 aa33.92■■■■□ 3.02
PBX1-201ENST00000340699 GCC2Q8IWJ2 1684 aa33.91■■■■□ 3.02
PBX1-201ENST00000340699 IQGAP3Q86VI3 1631 aa33.91■■■■□ 3.02
PBX1-201ENST00000340699 STAG3Q9UJ98 1225 aa33.9■■■■□ 3.02
PBX1-201ENST00000340699 NOS1P29475 1434 aa33.89■■■■□ 3.02
PBX1-201ENST00000340699 POLR1AO95602 1720 aaPredicted RBP33.87■■■■□ 3.01
PBX1-201ENST00000340699 UBR1Q8IWV7 1749 aa33.87■■■■□ 3.01
PBX1-201ENST00000340699 HFM1A2PYH4 1435 aa33.86■■■■□ 3.01
PBX1-201ENST00000340699 IDI1Q13907 227 aa33.85■■■■□ 3.01
PBX1-201ENST00000340699 SLC52A1Q9NWF4 448 aa33.85■■■■□ 3.01
PBX1-201ENST00000340699 SYNMO15061 1565 aa33.84■■■■□ 3.01
PBX1-201ENST00000340699 PIK3C2BO00750 1634 aa33.83■■■■□ 3.01
PBX1-201ENST00000340699 CERKQ8TCT0 537 aa33.82■■■■□ 3
PBX1-201ENST00000340699 E9PCH4 1651 aa33.8■■■■□ 3
PBX1-201ENST00000340699 NEURL4Q96JN8 1562 aa33.77■■■■□ 3
PBX1-201ENST00000340699 ILDR1Q86SU0 546 aaPredicted RBP33.77■■■■□ 3
PBX1-201ENST00000340699 TRIM52Q96A61 297 aa33.77■■■■□ 3
PBX1-201ENST00000340699 KDM5AP29375 1690 aaKnown RBP33.75■■■□□ 2.99
PBX1-201ENST00000340699 EID1Q9Y6B2 187 aa33.75■■■□□ 2.99
PBX1-201ENST00000340699 NPHP4O75161 1426 aaPredicted RBP33.75■■■□□ 2.99
PBX1-201ENST00000340699 TXNDC2Q86VQ3 553 aa33.74■■■□□ 2.99
PBX1-201ENST00000340699 MED14O60244 1454 aa33.74■■■□□ 2.99
PBX1-201ENST00000340699 SLIT1O75093 1534 aa33.73■■■□□ 2.99
PBX1-201ENST00000340699 FBXO41Q8TF61 875 aa33.72■■■□□ 2.99
PBX1-201ENST00000340699 ARHGAP23Q9P227 1491 aa33.71■■■□□ 2.99
PBX1-201ENST00000340699 ZNF335Q9H4Z2 1342 aaPredicted RBP33.71■■■□□ 2.99
PBX1-201ENST00000340699 TMEM2Q9UHN6 1383 aa33.71■■■□□ 2.99
PBX1-201ENST00000340699 SCAF11Q99590 1463 aaKnown RBP33.7■■■□□ 2.99
PBX1-201ENST00000340699 ADGRB3O60242 1522 aa33.69■■■□□ 2.98
PBX1-201ENST00000340699 LTKP29376 864 aa33.68■■■□□ 2.98
PBX1-201ENST00000340699 LTBP4Q8N2S1 1624 aa33.68■■■□□ 2.98
PBX1-201ENST00000340699 IQGAP1P46940 1657 aa33.68■■■□□ 2.98
PBX1-201ENST00000340699 CHGAP10645 457 aaKnown RBP33.66■■■□□ 2.98
PBX1-201ENST00000340699 SLC4A1APQ9BWU0 796 aaKnown RBP33.61■■■□□ 2.97
PBX1-201ENST00000340699 HDGFP51858 240 aaKnown RBP33.6■■■□□ 2.97
PBX1-201ENST00000340699 SPHKAPQ2M3C7 1700 aa33.59■■■□□ 2.97
PBX1-201ENST00000340699 TMEM131LA2VDJ0 1609 aa33.58■■■□□ 2.97
PBX1-201ENST00000340699 ACIN1Q9UKV3 1341 aaKnown RBP33.56■■■□□ 2.96
PBX1-201ENST00000340699 MYO5BQ9ULV0 1848 aa33.56■■■□□ 2.96
PBX1-201ENST00000340699 SETD5Q9C0A6 1442 aa33.55■■■□□ 2.96
PBX1-201ENST00000340699 IQSEC2Q5JU85 1478 aa33.53■■■□□ 2.96
PBX1-201ENST00000340699 PPP1R15AO75807 674 aaPredicted RBP33.52■■■□□ 2.96
PBX1-201ENST00000340699 RIMS2Q9UQ26 1411 aa33.52■■■□□ 2.96
PBX1-201ENST00000340699 BCANQ96GW7 911 aa33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms