RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 CAMSAP2Q08AD1 1489 aa22.83■■□□□ 1.24
CDK11B-201ENST00000340677 TEX2Q8IWB9 1127 aa22.82■■□□□ 1.24
CDK11B-201ENST00000340677 RAB3GAP2Q9H2M9 1393 aa22.82■■□□□ 1.24
CDK11B-201ENST00000340677 CROCC2H7BZ55 1655 aa22.82■■□□□ 1.24
CDK11B-201ENST00000340677 MYO5CQ9NQX4 1742 aa22.82■■□□□ 1.24
CDK11B-201ENST00000340677 CDC42BPBQ9Y5S2 1711 aa22.82■■□□□ 1.24
CDK11B-201ENST00000340677 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.8■■□□□ 1.24
CDK11B-201ENST00000340677 CHRM1P11229 460 aaPredicted RBP22.79■■□□□ 1.24
CDK11B-201ENST00000340677 TRHP20396 242 aaPredicted RBP22.79■■□□□ 1.24
CDK11B-201ENST00000340677 FTSJ3Q8IY81 847 aaKnown RBP22.79■■□□□ 1.24
CDK11B-201ENST00000340677 DAPK1P53355 1430 aa22.79■■□□□ 1.24
CDK11B-201ENST00000340677 DHX57Q6P158 1386 aaKnown RBP22.79■■□□□ 1.24
CDK11B-201ENST00000340677 NEFMP07197 916 aa22.78■■□□□ 1.24
CDK11B-201ENST00000340677 ADGBQ8N7X0 1667 aa22.78■■□□□ 1.24
CDK11B-201ENST00000340677 ROCK1Q13464 1354 aa22.78■■□□□ 1.24
CDK11B-201ENST00000340677 CFDP1Q9UEE9 299 aaPredicted RBP22.78■■□□□ 1.24
CDK11B-201ENST00000340677 TTC37Q6PGP7 1564 aa22.78■■□□□ 1.24
CDK11B-201ENST00000340677 HSP90AA1P07900 732 aaKnown RBP22.76■■□□□ 1.23
CDK11B-201ENST00000340677 ARHGEF5Q12774 1597 aa22.76■■□□□ 1.23
CDK11B-201ENST00000340677 NAIPQ13075 1403 aa22.75■■□□□ 1.23
CDK11B-201ENST00000340677 ARAP3Q8WWN8 1544 aa22.75■■□□□ 1.23
CDK11B-201ENST00000340677 ABCC5O15440 1437 aa22.75■■□□□ 1.23
CDK11B-201ENST00000340677 SHANK2Q9UPX8 1470 aa22.73■■□□□ 1.23
CDK11B-201ENST00000340677 WDR7Q9Y4E6 1490 aa22.73■■□□□ 1.23
CDK11B-201ENST00000340677 CNGB1Q14028 1251 aaPredicted RBP22.72■■□□□ 1.23
CDK11B-201ENST00000340677 ADGRL2O95490 1459 aa22.71■■□□□ 1.23
CDK11B-201ENST00000340677 HSP90B1P14625 803 aaKnown RBP22.7■■□□□ 1.22
CDK11B-201ENST00000340677 CDK11BP21127 795 aaKnown RBP22.7■■□□□ 1.22
CDK11B-201ENST00000340677 SAMD9LQ8IVG5 1584 aa22.7■■□□□ 1.22
CDK11B-201ENST00000340677 PLEKHH2Q8IVE3 1493 aa22.69■■□□□ 1.22
CDK11B-201ENST00000340677 ABCA9Q8IUA7 1624 aa22.69■■□□□ 1.22
CDK11B-201ENST00000340677 FBXO3Q9UK99 471 aa22.67■■□□□ 1.22
CDK11B-201ENST00000340677 ZNF644Q9H582 1327 aaPredicted RBP22.67■■□□□ 1.22
CDK11B-201ENST00000340677 PLCH2O75038 1416 aa22.66■■□□□ 1.22
CDK11B-201ENST00000340677 ARHGAP5Q13017 1502 aa22.65■■□□□ 1.22
CDK11B-201ENST00000340677 KIAA1107Q9UPP5 1409 aa22.64■■□□□ 1.22
CDK11B-201ENST00000340677 PLCD3Q8N3E9 789 aa22.64■■□□□ 1.22
CDK11B-201ENST00000340677 USP35Q9P2H5 1018 aa22.64■■□□□ 1.21
CDK11B-201ENST00000340677 MBD5Q9P267 1494 aa22.63■■□□□ 1.21
CDK11B-201ENST00000340677 MAST1Q9Y2H9 1570 aa22.63■■□□□ 1.21
CDK11B-201ENST00000340677 CNPY4Q8N129 248 aa22.63■■□□□ 1.21
CDK11B-201ENST00000340677 ASXL2Q76L83 1435 aa22.62■■□□□ 1.21
CDK11B-201ENST00000340677 RNF216Q9NWF9 866 aaPredicted RBP22.61■■□□□ 1.21
CDK11B-201ENST00000340677 MAPKBP1O60336 1514 aa22.61■■□□□ 1.21
CDK11B-201ENST00000340677 CCDC141Q6ZP82 1450 aa22.6■■□□□ 1.21
CDK11B-201ENST00000340677 NCOA1Q15788 1441 aa22.59■■□□□ 1.21
CDK11B-201ENST00000340677 ZNF830Q96NB3 372 aaPredicted RBP22.59■■□□□ 1.21
CDK11B-201ENST00000340677 NPM1P06748 294 aaKnown RBP eCLIP22.58■■□□□ 1.21
CDK11B-201ENST00000340677 CENPJQ9HC77 1338 aaPredicted RBP22.58■■□□□ 1.21
CDK11B-201ENST00000340677 TPRNQ4KMQ1 711 aa22.57■■□□□ 1.2
CDK11B-201ENST00000340677 KCNG1Q9UIX4 513 aa22.57■■□□□ 1.2
CDK11B-201ENST00000340677 ZNF777Q9ULD5 760 aaPredicted RBP22.57■■□□□ 1.2
CDK11B-201ENST00000340677 ANKRD30AQ9BXX3 1397 aa22.56■■□□□ 1.2
CDK11B-201ENST00000340677 ABCC1P33527 1531 aa22.56■■□□□ 1.2
CDK11B-201ENST00000340677 C9orf84Q5VXU9 1444 aa22.55■■□□□ 1.2
CDK11B-201ENST00000340677 SYCP2Q9BX26 1530 aa22.55■■□□□ 1.2
CDK11B-201ENST00000340677 KDM6BO15054 1643 aa22.54■■□□□ 1.2
CDK11B-201ENST00000340677 KCNH8Q96L42 1107 aa22.54■■□□□ 1.2
CDK11B-201ENST00000340677 CHIC2Q9UKJ5 165 aa22.54■■□□□ 1.2
CDK11B-201ENST00000340677 EFCAB2Q5VUJ9 269 aa22.53■■□□□ 1.2
CDK11B-201ENST00000340677 RRP7BPQ9NSQ0 103 aa22.53■■□□□ 1.2
CDK11B-201ENST00000340677 PPM1GO15355 546 aaPredicted RBP22.53■■□□□ 1.2
CDK11B-201ENST00000340677 IPO9Q96P70 1041 aaKnown RBP22.53■■□□□ 1.2
CDK11B-201ENST00000340677 PLXNC1O60486 1568 aa22.52■■□□□ 1.2
CDK11B-201ENST00000340677 GSE1Q14687 1217 aa22.52■■□□□ 1.19
CDK11B-201ENST00000340677 CFAP74Q9C0B2 1584 aa22.51■■□□□ 1.19
CDK11B-201ENST00000340677 ZBTB47Q9UFB7 747 aaPredicted RBP22.51■■□□□ 1.19
CDK11B-201ENST00000340677 TSPY4P0CV99 314 aa22.49■■□□□ 1.19
CDK11B-201ENST00000340677 TSPY10P0CW01 314 aa22.49■■□□□ 1.19
CDK11B-201ENST00000340677 ARHGEF12Q9NZN5 1544 aa22.45■■□□□ 1.18
CDK11B-201ENST00000340677 HNRNPMP52272 730 aaKnown RBP eCLIP22.45■■□□□ 1.18
CDK11B-201ENST00000340677 RRAGDQ9NQL2 400 aaPredicted RBP22.45■■□□□ 1.18
CDK11B-201ENST00000340677 PRDM10Q9NQV6 1147 aa22.45■■□□□ 1.18
CDK11B-201ENST00000340677 NCLP19338 710 aaKnown RBP22.44■■□□□ 1.18
CDK11B-201ENST00000340677 TMEM51Q9NW97 253 aa22.44■■□□□ 1.18
CDK11B-201ENST00000340677 FANCAO15360 1455 aa22.44■■□□□ 1.18
CDK11B-201ENST00000340677 GLI2P10070 1586 aa22.44■■□□□ 1.18
CDK11B-201ENST00000340677 ANKRD50Q9ULJ7 1429 aa22.42■■□□□ 1.18
CDK11B-201ENST00000340677 KDM5DQ9BY66 1539 aa22.42■■□□□ 1.18
CDK11B-201ENST00000340677 WWC1Q8IX03 1113 aa22.41■■□□□ 1.18
CDK11B-201ENST00000340677 RTEL1-TNFRSF6BF6WH68 1400 aa22.4■■□□□ 1.18
CDK11B-201ENST00000340677 PDCL3Q9H2J4 239 aa22.4■■□□□ 1.18
CDK11B-201ENST00000340677 VGLL3A8MV65 326 aa22.39■■□□□ 1.18
CDK11B-201ENST00000340677 KIF15Q9NS87 1388 aa22.39■■□□□ 1.17
CDK11B-201ENST00000340677 ARID4BQ4LE39 1312 aaPredicted RBP22.39■■□□□ 1.17
CDK11B-201ENST00000340677 MAP3K4Q9Y6R4 1608 aa22.38■■□□□ 1.17
CDK11B-201ENST00000340677 DENND4BO75064 1496 aaPredicted RBP22.37■■□□□ 1.17
CDK11B-201ENST00000340677 ANP32AP39687 249 aaKnown RBP22.37■■□□□ 1.17
CDK11B-201ENST00000340677 POLR3GLQ9BT43 218 aa22.37■■□□□ 1.17
CDK11B-201ENST00000340677 DUOX2Q9NRD8 1548 aa22.37■■□□□ 1.17
CDK11B-201ENST00000340677 INO80Q9ULG1 1556 aaPredicted RBP22.36■■□□□ 1.17
CDK11B-201ENST00000340677 CD109Q6YHK3 1445 aa22.36■■□□□ 1.17
CDK11B-201ENST00000340677 TRAPPC8Q9Y2L5 1435 aa22.35■■□□□ 1.17
CDK11B-201ENST00000340677 UNC13BO14795 1591 aa22.34■■□□□ 1.17
CDK11B-201ENST00000340677 ADGRL1O94910 1474 aa22.34■■□□□ 1.17
CDK11B-201ENST00000340677 NEO1Q92859 1461 aa22.34■■□□□ 1.17
CDK11B-201ENST00000340677 DCAF11Q8TEB1 546 aa22.34■■□□□ 1.17
CDK11B-201ENST00000340677 ZFYVE16Q7Z3T8 1539 aa22.34■■□□□ 1.17
CDK11B-201ENST00000340677 PZPP20742 1482 aa22.33■■□□□ 1.17
CDK11B-201ENST00000340677 RGS22Q8NE09 1264 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms