RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 KDM5AP29375 1690 aaKnown RBP7.3□□□□□ -1.24
MSL1-201ENST00000339569 CAMSAP2Q08AD1 1489 aa7.3□□□□□ -1.24
MSL1-201ENST00000339569 BRPF1P55201 1214 aaPredicted RBP7.29□□□□□ -1.24
MSL1-201ENST00000339569 CDK11AQ9UQ88 783 aaPredicted RBP7.29□□□□□ -1.24
MSL1-201ENST00000339569 POLR1AO95602 1720 aaPredicted RBP7.29□□□□□ -1.24
MSL1-201ENST00000339569 RICTORQ6R327 1708 aa7.29□□□□□ -1.24
MSL1-201ENST00000339569 DAPK1P53355 1430 aa7.28□□□□□ -1.24
MSL1-201ENST00000339569 ERBINQ96RT1 1412 aa7.28□□□□□ -1.24
MSL1-201ENST00000339569 DUOX2Q9NRD8 1548 aa7.28□□□□□ -1.24
MSL1-201ENST00000339569 KDM6BO15054 1643 aa7.28□□□□□ -1.24
MSL1-201ENST00000339569 DIP2BQ9P265 1576 aa7.27□□□□□ -1.25
MSL1-201ENST00000339569 CCDC141Q6ZP82 1450 aa7.27□□□□□ -1.25
MSL1-201ENST00000339569 PRDM15P57071 1507 aaPredicted RBP7.26□□□□□ -1.25
MSL1-201ENST00000339569 BBXQ8WY36 941 aaPredicted RBP7.26□□□□□ -1.25
MSL1-201ENST00000339569 KIAA1210Q9ULL0 1709 aa7.26□□□□□ -1.25
MSL1-201ENST00000339569 AGLP35573 1532 aa7.25□□□□□ -1.25
MSL1-201ENST00000339569 ZFYVE16Q7Z3T8 1539 aa7.25□□□□□ -1.25
MSL1-201ENST00000339569 SETD5Q9C0A6 1442 aa7.25□□□□□ -1.25
MSL1-201ENST00000339569 MLH3Q9UHC1 1453 aa7.25□□□□□ -1.25
MSL1-201ENST00000339569 NAIPQ13075 1403 aa7.25□□□□□ -1.25
MSL1-201ENST00000339569 ABCC5O15440 1437 aa7.24□□□□□ -1.25
MSL1-201ENST00000339569 TET3O43151 1660 aa7.24□□□□□ -1.25
MSL1-201ENST00000339569 MTUS2Q5JR59 1369 aa7.24□□□□□ -1.25
MSL1-201ENST00000339569 MROH2AA6NES4 1674 aa7.24□□□□□ -1.25
MSL1-201ENST00000339569 ARHGEF12Q9NZN5 1544 aa7.24□□□□□ -1.25
MSL1-201ENST00000339569 DMRT2Q9Y5R5 561 aa7.23□□□□□ -1.25
MSL1-201ENST00000339569 HECW2Q9P2P5 1572 aa7.23□□□□□ -1.25
MSL1-201ENST00000339569 ARID3CA6NKF2 412 aa7.23□□□□□ -1.25
MSL1-201ENST00000339569 FBXO41Q8TF61 875 aa7.23□□□□□ -1.25
MSL1-201ENST00000339569 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.23□□□□□ -1.25
MSL1-201ENST00000339569 KIDINS220Q9ULH0 1771 aa7.22□□□□□ -1.25
MSL1-201ENST00000339569 SLC4A2P04920 1241 aa7.22□□□□□ -1.25
MSL1-201ENST00000339569 CEP152O94986 1710 aa7.22□□□□□ -1.25
MSL1-201ENST00000339569 IFT172Q9UG01 1749 aa7.22□□□□□ -1.25
MSL1-201ENST00000339569 FRMPD1Q5SYB0 1578 aa7.21□□□□□ -1.25
MSL1-201ENST00000339569 MROH1Q8NDA8 1641 aa7.21□□□□□ -1.25
MSL1-201ENST00000339569 SOCS7O14512 581 aa7.21□□□□□ -1.26
MSL1-201ENST00000339569 NCOA1Q15788 1441 aa7.21□□□□□ -1.26
MSL1-201ENST00000339569 KANK4Q5T7N3 995 aaPredicted RBP7.2□□□□□ -1.26
MSL1-201ENST00000339569 RPRD2Q5VT52 1461 aaKnown RBP7.2□□□□□ -1.26
MSL1-201ENST00000339569 PIK3C2BO00750 1634 aa7.19□□□□□ -1.26
MSL1-201ENST00000339569 PDIA4P13667 645 aaKnown RBP7.19□□□□□ -1.26
MSL1-201ENST00000339569 ATF5Q9Y2D1 282 aaPredicted RBP7.18□□□□□ -1.26
MSL1-201ENST00000339569 PTPRKQ15262 1439 aa7.18□□□□□ -1.26
MSL1-201ENST00000339569 ATP7AQ04656 1500 aa7.18□□□□□ -1.26
MSL1-201ENST00000339569 DHX57Q6P158 1386 aaKnown RBP7.18□□□□□ -1.26
MSL1-201ENST00000339569 ZNF518AQ6AHZ1 1483 aa7.18□□□□□ -1.26
MSL1-201ENST00000339569 RGL2O15211 777 aa7.18□□□□□ -1.26
MSL1-201ENST00000339569 DENND4BO75064 1496 aaPredicted RBP7.18□□□□□ -1.26
MSL1-201ENST00000339569 ASXL2Q76L83 1435 aa7.17□□□□□ -1.26
MSL1-201ENST00000339569 SPRYD3Q8NCJ5 442 aa7.17□□□□□ -1.26
MSL1-201ENST00000339569 SPHKAPQ2M3C7 1700 aa7.17□□□□□ -1.26
MSL1-201ENST00000339569 VASPP50552 380 aaPredicted RBP7.17□□□□□ -1.26
MSL1-201ENST00000339569 ARHGAP31Q2M1Z3 1444 aa7.16□□□□□ -1.26
MSL1-201ENST00000339569 POGZQ7Z3K3 1410 aa7.16□□□□□ -1.26
MSL1-201ENST00000339569 PZPP20742 1482 aa7.16□□□□□ -1.26
MSL1-201ENST00000339569 TRPM2O94759 1503 aa7.16□□□□□ -1.26
MSL1-201ENST00000339569 SYCP2Q9BX26 1530 aa7.16□□□□□ -1.26
MSL1-201ENST00000339569 UHRF1BP1Q6BDS2 1440 aa7.16□□□□□ -1.26
MSL1-201ENST00000339569 C9orf84Q5VXU9 1444 aa7.15□□□□□ -1.26
MSL1-201ENST00000339569 ARHGEF40Q8TER5 1519 aa7.15□□□□□ -1.26
MSL1-201ENST00000339569 PTPRTO14522 1441 aa7.15□□□□□ -1.26
MSL1-201ENST00000339569 DIP2CQ9Y2E4 1556 aa7.15□□□□□ -1.26
MSL1-201ENST00000339569 ARHGAP5Q13017 1502 aa7.15□□□□□ -1.26
MSL1-201ENST00000339569 ANKRD30AQ9BXX3 1397 aa7.15□□□□□ -1.27
MSL1-201ENST00000339569 LMTK3Q96Q04 1460 aa7.15□□□□□ -1.27
MSL1-201ENST00000339569 SPATA31D1Q6ZQQ2 1576 aa7.15□□□□□ -1.27
MSL1-201ENST00000339569 STAC3Q96MF2 364 aa7.14□□□□□ -1.27
MSL1-201ENST00000339569 ABCA6Q8N139 1617 aa7.14□□□□□ -1.27
MSL1-201ENST00000339569 PLEKHD1A6NEE1 506 aa7.14□□□□□ -1.27
MSL1-201ENST00000339569 UGGT1Q9NYU2 1555 aa7.13□□□□□ -1.27
MSL1-201ENST00000339569 MYO3AQ8NEV4 1616 aa7.13□□□□□ -1.27
MSL1-201ENST00000339569 EFCAB6Q5THR3 1501 aa7.13□□□□□ -1.27
MSL1-201ENST00000339569 RNF216Q9NWF9 866 aaPredicted RBP7.13□□□□□ -1.27
MSL1-201ENST00000339569 IQSEC2Q5JU85 1478 aa7.13□□□□□ -1.27
MSL1-201ENST00000339569 E9PCH4 1651 aa7.12□□□□□ -1.27
MSL1-201ENST00000339569 CCDC9Q9Y3X0 531 aaKnown RBP7.12□□□□□ -1.27
MSL1-201ENST00000339569 RAB3GAP2Q9H2M9 1393 aa7.12□□□□□ -1.27
MSL1-201ENST00000339569 FANCAO15360 1455 aa7.12□□□□□ -1.27
MSL1-201ENST00000339569 CAMSAP1Q5T5Y3 1602 aa7.12□□□□□ -1.27
MSL1-201ENST00000339569 NRXN1Q9ULB1 1477 aa7.11□□□□□ -1.27
MSL1-201ENST00000339569 MADDQ8WXG6 1647 aa7.11□□□□□ -1.27
MSL1-201ENST00000339569 SETBP1Q9Y6X0 1596 aa7.1□□□□□ -1.27
MSL1-201ENST00000339569 CDK11BP21127 795 aaKnown RBP7.1□□□□□ -1.27
MSL1-201ENST00000339569 PRAG1Q86YV5 1406 aa7.1□□□□□ -1.27
MSL1-201ENST00000339569 MYOM2P54296 1465 aa7.09□□□□□ -1.27
MSL1-201ENST00000339569 FOXD4L5Q5VV16 416 aaPredicted RBP7.08□□□□□ -1.28
MSL1-201ENST00000339569 FOXD4L4Q8WXT5 416 aaPredicted RBP7.08□□□□□ -1.28
MSL1-201ENST00000339569 TRPM1Q7Z4N2 1603 aa7.08□□□□□ -1.28
MSL1-201ENST00000339569 KIF1BO60333 1816 aa7.08□□□□□ -1.28
MSL1-201ENST00000339569 ANKRD30BQ9BXX2 1392 aa7.08□□□□□ -1.28
MSL1-201ENST00000339569 ADGRL1O94910 1474 aa7.08□□□□□ -1.28
MSL1-201ENST00000339569 ANKRD50Q9ULJ7 1429 aa7.07□□□□□ -1.28
MSL1-201ENST00000339569 DHX29Q7Z478 1369 aaKnown RBP7.07□□□□□ -1.28
MSL1-201ENST00000339569 IQGAP1P46940 1657 aa7.07□□□□□ -1.28
MSL1-201ENST00000339569 PPLO60437 1756 aa7.07□□□□□ -1.28
MSL1-201ENST00000339569 SYNMO15061 1565 aa7.07□□□□□ -1.28
MSL1-201ENST00000339569 ADGRB3O60242 1522 aa7.07□□□□□ -1.28
MSL1-201ENST00000339569 ZFYVE9O95405 1425 aa7.06□□□□□ -1.28
MSL1-201ENST00000339569 HOXD11P31277 338 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms