RNA–Protein interactions for RNA: ENST00000338017.8

SLITRK4-201, Transcript of SLIT and NTRK like family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLITRK4, Length 3,357 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLITRK4-201ENST00000338017 NEUROD2Q15784 382 aa21.33■■□□□ 1.01
SLITRK4-201ENST00000338017 IQGAP2Q13576 1575 aa21.32■■□□□ 1
SLITRK4-201ENST00000338017 BCORL1Q5H9F3 1711 aa21.32■■□□□ 1
SLITRK4-201ENST00000338017 NFKBIBQ15653 356 aa21.32■■□□□ 1
SLITRK4-201ENST00000338017 KNSTRNQ9Y448 316 aa21.3■■□□□ 1
SLITRK4-201ENST00000338017 ARHGEF11O15085 1522 aa21.29■■□□□ 1
SLITRK4-201ENST00000338017 PDE3BQ13370 1112 aa21.29■■□□□ 1
SLITRK4-201ENST00000338017 SENP3Q9H4L4 574 aaPredicted RBP21.28■■□□□ 1
SLITRK4-201ENST00000338017 CAMSAP2Q08AD1 1489 aa21.28■■□□□ 1
SLITRK4-201ENST00000338017 MS4A1P11836 297 aa21.27■■□□□ 1
SLITRK4-201ENST00000338017 TNNT2P45379 298 aaPredicted RBP21.27■■□□□ 1
SLITRK4-201ENST00000338017 FRAT1Q92837 279 aaPredicted RBP21.27■■□□□ 1
SLITRK4-201ENST00000338017 PLB1Q6P1J6 1458 aa21.27■□□□□ 0.99
SLITRK4-201ENST00000338017 GSE1Q14687 1217 aa21.27■□□□□ 0.99
SLITRK4-201ENST00000338017 SLKQ9H2G2 1235 aaPredicted RBP21.26■□□□□ 0.99
SLITRK4-201ENST00000338017 TMF1P82094 1093 aa21.25■□□□□ 0.99
SLITRK4-201ENST00000338017 ARID4BQ4LE39 1312 aaPredicted RBP21.25■□□□□ 0.99
SLITRK4-201ENST00000338017 FRAT2O75474 233 aaPredicted RBP21.24■□□□□ 0.99
SLITRK4-201ENST00000338017 SPRYD3Q8NCJ5 442 aa21.24■□□□□ 0.99
SLITRK4-201ENST00000338017 NUP153P49790 1475 aaKnown RBP21.23■□□□□ 0.99
SLITRK4-201ENST00000338017 WDR62O43379 1518 aa21.22■□□□□ 0.99
SLITRK4-201ENST00000338017 JPH4Q96JJ6 628 aa21.22■□□□□ 0.99
SLITRK4-201ENST00000338017 LRPPRCP42704 1394 aaKnown RBP21.22■□□□□ 0.99
SLITRK4-201ENST00000338017 ABCA5Q8WWZ7 1642 aa21.21■□□□□ 0.99
SLITRK4-201ENST00000338017 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.21■□□□□ 0.99
SLITRK4-201ENST00000338017 USP35Q9P2H5 1018 aa21.21■□□□□ 0.99
SLITRK4-201ENST00000338017 ZNF608Q9ULD9 1512 aaPredicted RBP21.21■□□□□ 0.99
SLITRK4-201ENST00000338017 TROQ12816 1431 aaPredicted RBP21.2■□□□□ 0.98
SLITRK4-201ENST00000338017 CCDC144AA2RUR9 1427 aa21.19■□□□□ 0.98
SLITRK4-201ENST00000338017 GOLGA2Q08379 1002 aa21.19■□□□□ 0.98
SLITRK4-201ENST00000338017 APAF1O14727 1248 aa21.18■□□□□ 0.98
SLITRK4-201ENST00000338017 DISP3Q9P2K9 1392 aa21.18■□□□□ 0.98
SLITRK4-201ENST00000338017 BCAR3O75815 825 aa21.17■□□□□ 0.98
SLITRK4-201ENST00000338017 FAM161AQ3B820 660 aa21.17■□□□□ 0.98
SLITRK4-201ENST00000338017 C9orf84Q5VXU9 1444 aa21.17■□□□□ 0.98
SLITRK4-201ENST00000338017 DNMT1P26358 1616 aaKnown RBP21.17■□□□□ 0.98
SLITRK4-201ENST00000338017 GPATCH8Q9UKJ3 1502 aaKnown RBP21.16■□□□□ 0.98
SLITRK4-201ENST00000338017 PER1O15534 1290 aaPredicted RBP21.15■□□□□ 0.98
SLITRK4-201ENST00000338017 CENPQQ7L2Z9 268 aaPredicted RBP21.14■□□□□ 0.98
SLITRK4-201ENST00000338017 BCL2L13Q9BXK5 485 aa21.14■□□□□ 0.97
SLITRK4-201ENST00000338017 RRP7AQ9Y3A4 280 aaKnown RBP21.14■□□□□ 0.97
SLITRK4-201ENST00000338017 COG6Q9Y2V7 657 aa21.12■□□□□ 0.97
SLITRK4-201ENST00000338017 RALGAPBQ86X10 1494 aa21.12■□□□□ 0.97
SLITRK4-201ENST00000338017 KDM5CP41229 1560 aa21.12■□□□□ 0.97
SLITRK4-201ENST00000338017 CLUAP1Q96AJ1 413 aa21.11■□□□□ 0.97
SLITRK4-201ENST00000338017 CHGAP10645 457 aaKnown RBP21.11■□□□□ 0.97
SLITRK4-201ENST00000338017 PPP2R1AP30153 589 aa21.11■□□□□ 0.97
SLITRK4-201ENST00000338017 KIAA0586Q9BVV6 1533 aa21.1■□□□□ 0.97
SLITRK4-201ENST00000338017 PARD3Q8TEW0 1356 aa21.09■□□□□ 0.97
SLITRK4-201ENST00000338017 PANK1Q8TE04 598 aa21.09■□□□□ 0.97
SLITRK4-201ENST00000338017 GZF1Q9H116 711 aaPredicted RBP21.08■□□□□ 0.97
SLITRK4-201ENST00000338017 DUSP27Q5VZP5 1158 aa21.07■□□□□ 0.96
SLITRK4-201ENST00000338017 MBD5Q9P267 1494 aa21.07■□□□□ 0.96
SLITRK4-201ENST00000338017 SPINK5Q9NQ38 1064 aaPredicted RBP21.06■□□□□ 0.96
SLITRK4-201ENST00000338017 PLEKHH1Q9ULM0 1364 aa21.06■□□□□ 0.96
SLITRK4-201ENST00000338017 TESK2Q96S53 571 aa21.06■□□□□ 0.96
SLITRK4-201ENST00000338017 KIF14Q15058 1648 aa21.06■□□□□ 0.96
SLITRK4-201ENST00000338017 DISP1Q96F81 1524 aa21.05■□□□□ 0.96
SLITRK4-201ENST00000338017 KIF21AQ7Z4S6 1674 aa21.05■□□□□ 0.96
SLITRK4-201ENST00000338017 C8orf34Q49A92 452 aa21.05■□□□□ 0.96
SLITRK4-201ENST00000338017 CARMIL2Q6F5E8 1435 aa21.02■□□□□ 0.96
SLITRK4-201ENST00000338017 RAPGEF6Q8TEU7 1601 aa21.02■□□□□ 0.96
SLITRK4-201ENST00000338017 ERBINQ96RT1 1412 aa21.01■□□□□ 0.95
SLITRK4-201ENST00000338017 POGKQ9P215 609 aa21.01■□□□□ 0.95
SLITRK4-201ENST00000338017 IGHDP01880 384 aa21■□□□□ 0.95
SLITRK4-201ENST00000338017 SEC24BO95487 1268 aa20.99■□□□□ 0.95
SLITRK4-201ENST00000338017 ADAMTS12P58397 1594 aa20.99■□□□□ 0.95
SLITRK4-201ENST00000338017 DMRT2Q9Y5R5 561 aa20.99■□□□□ 0.95
SLITRK4-201ENST00000338017 UHRF1BP1Q6BDS2 1440 aa20.98■□□□□ 0.95
SLITRK4-201ENST00000338017 KIAA0556O60303 1618 aa20.98■□□□□ 0.95
SLITRK4-201ENST00000338017 WASHC2CQ9Y4E1 1318 aa20.98■□□□□ 0.95
SLITRK4-201ENST00000338017 UPF2Q9HAU5 1272 aaKnown RBP20.98■□□□□ 0.95
SLITRK4-201ENST00000338017 TARBP1Q13395 1621 aaKnown RBP20.97■□□□□ 0.95
SLITRK4-201ENST00000338017 PRAG1Q86YV5 1406 aa20.96■□□□□ 0.95
SLITRK4-201ENST00000338017 BECN1Q14457 450 aa20.96■□□□□ 0.95
SLITRK4-201ENST00000338017 PBRM1Q86U86 1689 aa20.96■□□□□ 0.95
SLITRK4-201ENST00000338017 KDM2BQ8NHM5 1336 aa20.95■□□□□ 0.94
SLITRK4-201ENST00000338017 SLFN5Q08AF3 891 aa20.95■□□□□ 0.94
SLITRK4-201ENST00000338017 POLR1AO95602 1720 aaPredicted RBP20.95■□□□□ 0.94
SLITRK4-201ENST00000338017 CENPJQ9HC77 1338 aaPredicted RBP20.94■□□□□ 0.94
SLITRK4-201ENST00000338017 TNNQ9UQP3 1299 aa20.94■□□□□ 0.94
SLITRK4-201ENST00000338017 GRIN2AQ12879 1464 aa20.93■□□□□ 0.94
SLITRK4-201ENST00000338017 CDCA8Q53HL2 280 aa20.9■□□□□ 0.94
SLITRK4-201ENST00000338017 ERCC6Q03468 1493 aa20.9■□□□□ 0.94
SLITRK4-201ENST00000338017 MAGI1Q96QZ7 1491 aaPredicted RBP20.89■□□□□ 0.94
SLITRK4-201ENST00000338017 AMER1Q5JTC6 1135 aaPredicted RBP20.89■□□□□ 0.93
SLITRK4-201ENST00000338017 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
SLITRK4-201ENST00000338017 MFAP1P55081 439 aaKnown RBP20.88■□□□□ 0.93
SLITRK4-201ENST00000338017 SAFB2Q14151 953 aaKnown RBP eCLIP20.88■□□□□ 0.93
SLITRK4-201ENST00000338017 CFAP70Q5T0N1 1121 aa20.88■□□□□ 0.93
SLITRK4-201ENST00000338017 E9PSI1 815 aa20.86■□□□□ 0.93
SLITRK4-201ENST00000338017 MORC1Q86VD1 984 aa20.86■□□□□ 0.93
SLITRK4-201ENST00000338017 ADGRL2O95490 1459 aa20.86■□□□□ 0.93
SLITRK4-201ENST00000338017 PLEKHH2Q8IVE3 1493 aa20.86■□□□□ 0.93
SLITRK4-201ENST00000338017 NUTM2DQ5VT03 806 aaPredicted RBP20.85■□□□□ 0.93
SLITRK4-201ENST00000338017 A2MP01023 1474 aa20.85■□□□□ 0.93
SLITRK4-201ENST00000338017 FAM135AQ9P2D6 1515 aa20.85■□□□□ 0.93
SLITRK4-201ENST00000338017 ATP10BO94823 1461 aa20.85■□□□□ 0.93
SLITRK4-201ENST00000338017 PTPRGP23470 1445 aa20.85■□□□□ 0.93
SLITRK4-201ENST00000338017 ARHGEF12Q9NZN5 1544 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms