RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 ABCA8O94911 1581 aa13.03□□□□□ -0.32
MSL3-202ENST00000337339 ANP32EQ9BTT0 268 aa13.03□□□□□ -0.32
MSL3-202ENST00000337339 TMF1P82094 1093 aa13.02□□□□□ -0.32
MSL3-202ENST00000337339 MBD5Q9P267 1494 aa13.02□□□□□ -0.33
MSL3-202ENST00000337339 SYCP2Q9BX26 1530 aa13.02□□□□□ -0.33
MSL3-202ENST00000337339 MYBBP1AQ9BQG0 1328 aaKnown RBP13.01□□□□□ -0.33
MSL3-202ENST00000337339 RALBP1Q15311 655 aa13.01□□□□□ -0.33
MSL3-202ENST00000337339 KTN1Q86UP2 1357 aaKnown RBP13□□□□□ -0.33
MSL3-202ENST00000337339 ERCC6L2Q5T890 1561 aa12.99□□□□□ -0.33
MSL3-202ENST00000337339 NPM1P06748 294 aaKnown RBP eCLIP12.99□□□□□ -0.33
MSL3-202ENST00000337339 NLRP13Q86W25 1043 aa12.99□□□□□ -0.33
MSL3-202ENST00000337339 KNSTRNQ9Y448 316 aa12.99□□□□□ -0.33
MSL3-202ENST00000337339 ARID4BQ4LE39 1312 aaPredicted RBP12.99□□□□□ -0.33
MSL3-202ENST00000337339 CDC42BPAQ5VT25 1732 aa12.98□□□□□ -0.33
MSL3-202ENST00000337339 FAM135AQ9P2D6 1515 aa12.98□□□□□ -0.33
MSL3-202ENST00000337339 CDCA7LQ96GN5 454 aa12.98□□□□□ -0.33
MSL3-202ENST00000337339 GGT6Q6P531 493 aa12.97□□□□□ -0.33
MSL3-202ENST00000337339 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
MSL3-202ENST00000337339 SHANK2Q9UPX8 1470 aa12.96□□□□□ -0.34
MSL3-202ENST00000337339 ADGBQ8N7X0 1667 aa12.96□□□□□ -0.34
MSL3-202ENST00000337339 RALGAPBQ86X10 1494 aa12.96□□□□□ -0.34
MSL3-202ENST00000337339 PLIN1O60240 522 aa12.95□□□□□ -0.34
MSL3-202ENST00000337339 NUTM2DQ5VT03 806 aaPredicted RBP12.95□□□□□ -0.34
MSL3-202ENST00000337339 TRAPPC8Q9Y2L5 1435 aa12.95□□□□□ -0.34
MSL3-202ENST00000337339 SAMD9LQ8IVG5 1584 aa12.95□□□□□ -0.34
MSL3-202ENST00000337339 DISP3Q9P2K9 1392 aa12.94□□□□□ -0.34
MSL3-202ENST00000337339 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.34
MSL3-202ENST00000337339 NPM2Q86SE8 214 aaKnown RBP12.94□□□□□ -0.34
MSL3-202ENST00000337339 BCORL1Q5H9F3 1711 aa12.94□□□□□ -0.34
MSL3-202ENST00000337339 TNNT2P45379 298 aaPredicted RBP12.94□□□□□ -0.34
MSL3-202ENST00000337339 ERICH6BQ5W0A0 696 aa12.94□□□□□ -0.34
MSL3-202ENST00000337339 RCAN3Q9UKA8 241 aa12.94□□□□□ -0.34
MSL3-202ENST00000337339 UHRF1BP1Q6BDS2 1440 aa12.93□□□□□ -0.34
MSL3-202ENST00000337339 PRAG1Q86YV5 1406 aa12.93□□□□□ -0.34
MSL3-202ENST00000337339 ADCY10Q96PN6 1610 aa12.92□□□□□ -0.34
MSL3-202ENST00000337339 SCAPERQ9BY12 1400 aa12.92□□□□□ -0.34
MSL3-202ENST00000337339 TESK2Q96S53 571 aa12.92□□□□□ -0.34
MSL3-202ENST00000337339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.92□□□□□ -0.34
MSL3-202ENST00000337339 CFAP70Q5T0N1 1121 aa12.92□□□□□ -0.34
MSL3-202ENST00000337339 EXOC6Q8TAG9 804 aa12.92□□□□□ -0.34
MSL3-202ENST00000337339 TTC37Q6PGP7 1564 aa12.91□□□□□ -0.34
MSL3-202ENST00000337339 MSH5O43196 834 aa12.91□□□□□ -0.34
MSL3-202ENST00000337339 BRD4O60885 1362 aaPredicted RBP12.91□□□□□ -0.34
MSL3-202ENST00000337339 PLA2R1Q13018 1463 aa12.9□□□□□ -0.34
MSL3-202ENST00000337339 PER1O15534 1290 aaPredicted RBP12.9□□□□□ -0.34
MSL3-202ENST00000337339 CCDC146Q8IYE0 955 aa12.9□□□□□ -0.34
MSL3-202ENST00000337339 KDM5CP41229 1560 aa12.9□□□□□ -0.34
MSL3-202ENST00000337339 PLCH2O75038 1416 aa12.9□□□□□ -0.34
MSL3-202ENST00000337339 KANK1Q14678 1352 aa12.9□□□□□ -0.34
MSL3-202ENST00000337339 ADAMTS8Q9UP79 889 aa12.9□□□□□ -0.35
MSL3-202ENST00000337339 ARHGEF12Q9NZN5 1544 aa12.89□□□□□ -0.35
MSL3-202ENST00000337339 SMG6Q86US8 1419 aaKnown RBP12.89□□□□□ -0.35
MSL3-202ENST00000337339 A2MP01023 1474 aa12.89□□□□□ -0.35
MSL3-202ENST00000337339 CHD1O14646 1710 aa12.89□□□□□ -0.35
MSL3-202ENST00000337339 CROCC2H7BZ55 1655 aa12.88□□□□□ -0.35
MSL3-202ENST00000337339 SAFB2Q14151 953 aaKnown RBP eCLIP12.88□□□□□ -0.35
MSL3-202ENST00000337339 ERBINQ96RT1 1412 aa12.88□□□□□ -0.35
MSL3-202ENST00000337339 RRP1P56182 461 aaKnown RBP12.87□□□□□ -0.35
MSL3-202ENST00000337339 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
MSL3-202ENST00000337339 TRAK1Q9UPV9 953 aa12.87□□□□□ -0.35
MSL3-202ENST00000337339 ABCC2Q92887 1545 aa12.87□□□□□ -0.35
MSL3-202ENST00000337339 CDC42BPBQ9Y5S2 1711 aa12.86□□□□□ -0.35
MSL3-202ENST00000337339 ARHGEF5Q12774 1597 aa12.86□□□□□ -0.35
MSL3-202ENST00000337339 CDCA8Q53HL2 280 aa12.86□□□□□ -0.35
MSL3-202ENST00000337339 NBR1Q14596 966 aa12.85□□□□□ -0.35
MSL3-202ENST00000337339 TMEM132EQ6IEE7 984 aa12.85□□□□□ -0.35
MSL3-202ENST00000337339 PREX2Q70Z35 1606 aa12.84□□□□□ -0.35
MSL3-202ENST00000337339 SKAP1Q86WV1 359 aa12.84□□□□□ -0.35
MSL3-202ENST00000337339 ADGRF5Q8IZF2 1346 aa12.83□□□□□ -0.36
MSL3-202ENST00000337339 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
MSL3-202ENST00000337339 ANP32AP39687 249 aaKnown RBP12.83□□□□□ -0.36
MSL3-202ENST00000337339 RAPGEF3O95398 923 aa12.82□□□□□ -0.36
MSL3-202ENST00000337339 WASHC2CQ9Y4E1 1318 aa12.82□□□□□ -0.36
MSL3-202ENST00000337339 DUOX2Q9NRD8 1548 aa12.82□□□□□ -0.36
MSL3-202ENST00000337339 PARD3Q8TEW0 1356 aa12.81□□□□□ -0.36
MSL3-202ENST00000337339 KDM5DQ9BY66 1539 aa12.81□□□□□ -0.36
MSL3-202ENST00000337339 FANCAO15360 1455 aa12.81□□□□□ -0.36
MSL3-202ENST00000337339 STK26Q9P289 416 aa12.81□□□□□ -0.36
MSL3-202ENST00000337339 OSCARQ8IYS5 282 aa12.8□□□□□ -0.36
MSL3-202ENST00000337339 APAF1O14727 1248 aa12.79□□□□□ -0.36
MSL3-202ENST00000337339 CRBNQ96SW2 442 aa12.79□□□□□ -0.36
MSL3-202ENST00000337339 LRPPRCP42704 1394 aaKnown RBP12.79□□□□□ -0.36
MSL3-202ENST00000337339 FANCIQ9NVI1 1328 aa12.79□□□□□ -0.36
MSL3-202ENST00000337339 PDE3BQ13370 1112 aa12.79□□□□□ -0.36
MSL3-202ENST00000337339 ADGRL1O94910 1474 aa12.78□□□□□ -0.36
MSL3-202ENST00000337339 CANXP27824 592 aaKnown RBP12.77□□□□□ -0.36
MSL3-202ENST00000337339 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.36
MSL3-202ENST00000337339 RRP7AQ9Y3A4 280 aaKnown RBP12.77□□□□□ -0.37
MSL3-202ENST00000337339 GPRASP1Q5JY77 1395 aa12.77□□□□□ -0.37
MSL3-202ENST00000337339 SLC12A5Q9H2X9 1139 aa12.76□□□□□ -0.37
MSL3-202ENST00000337339 MYO5CQ9NQX4 1742 aa12.76□□□□□ -0.37
MSL3-202ENST00000337339 GOLGA2Q08379 1002 aa12.76□□□□□ -0.37
MSL3-202ENST00000337339 AMER1Q5JTC6 1135 aaPredicted RBP12.76□□□□□ -0.37
MSL3-202ENST00000337339 MORC1Q86VD1 984 aa12.76□□□□□ -0.37
MSL3-202ENST00000337339 COL17A1Q9UMD9 1497 aaPredicted RBP12.76□□□□□ -0.37
MSL3-202ENST00000337339 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
MSL3-202ENST00000337339 ZBTB47Q9UFB7 747 aaPredicted RBP12.75□□□□□ -0.37
MSL3-202ENST00000337339 EIF3AQ14152 1382 aaKnown RBP12.75□□□□□ -0.37
MSL3-202ENST00000337339 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
MSL3-202ENST00000337339 CYB5RLQ6IPT4 315 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms