RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 IPO9Q96P70 1041 aaKnown RBP27.79■■■□□ 2.04
SPNS1-203ENST00000334536 DHX29Q7Z478 1369 aaKnown RBP27.78■■■□□ 2.04
SPNS1-203ENST00000334536 ROCK2O75116 1388 aaKnown RBP27.77■■■□□ 2.04
SPNS1-203ENST00000334536 BCORL1Q5H9F3 1711 aa27.77■■■□□ 2.04
SPNS1-203ENST00000334536 ERCC6L2Q5T890 1561 aa27.76■■■□□ 2.04
SPNS1-203ENST00000334536 SAMD9LQ8IVG5 1584 aa27.76■■■□□ 2.03
SPNS1-203ENST00000334536 HNRNPMP52272 730 aaKnown RBP eCLIP27.75■■■□□ 2.03
SPNS1-203ENST00000334536 ANP32AP39687 249 aaKnown RBP27.75■■■□□ 2.03
SPNS1-203ENST00000334536 FAM9BQ8IZU0 186 aa27.74■■■□□ 2.03
SPNS1-203ENST00000334536 CDC42BPBQ9Y5S2 1711 aa27.73■■■□□ 2.03
SPNS1-203ENST00000334536 WASHC2CQ9Y4E1 1318 aa27.73■■■□□ 2.03
SPNS1-203ENST00000334536 ZNF326Q5BKZ1 582 aaKnown RBP27.72■■■□□ 2.03
SPNS1-203ENST00000334536 MAST1Q9Y2H9 1570 aa27.71■■■□□ 2.03
SPNS1-203ENST00000334536 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.7■■■□□ 2.03
SPNS1-203ENST00000334536 ZBTB47Q9UFB7 747 aaPredicted RBP27.67■■■□□ 2.02
SPNS1-203ENST00000334536 FAM135AQ9P2D6 1515 aa27.67■■■□□ 2.02
SPNS1-203ENST00000334536 CARD11Q9BXL7 1154 aa27.67■■■□□ 2.02
SPNS1-203ENST00000334536 PKNOX2Q96KN3 472 aa27.65■■■□□ 2.02
SPNS1-203ENST00000334536 EIF5BO60841 1220 aaKnown RBP27.64■■■□□ 2.02
SPNS1-203ENST00000334536 PLEKHH2Q8IVE3 1493 aa27.64■■■□□ 2.01
SPNS1-203ENST00000334536 UNC13BO14795 1591 aa27.62■■■□□ 2.01
SPNS1-203ENST00000334536 KTN1Q86UP2 1357 aaKnown RBP27.59■■■□□ 2.01
SPNS1-203ENST00000334536 RTN4Q9NQC3 1192 aaKnown RBP27.59■■■□□ 2.01
SPNS1-203ENST00000334536 ARHGAP5Q13017 1502 aa27.59■■■□□ 2.01
SPNS1-203ENST00000334536 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.59■■■□□ 2.013e-6■■□□□ 13.1
SPNS1-203ENST00000334536 SYCP2Q9BX26 1530 aa27.59■■■□□ 2.01
SPNS1-203ENST00000334536 ABCC2Q92887 1545 aa27.58■■■□□ 2.01
SPNS1-203ENST00000334536 PLXNC1O60486 1568 aa27.58■■■□□ 2.01
SPNS1-203ENST00000334536 TTC37Q6PGP7 1564 aa27.58■■■□□ 2.01
SPNS1-203ENST00000334536 DCAF11Q8TEB1 546 aa27.58■■■□□ 2.01
SPNS1-203ENST00000334536 IRX6P78412 446 aaPredicted RBP27.57■■■□□ 2
SPNS1-203ENST00000334536 POLR3GLQ9BT43 218 aa27.56■■■□□ 2
SPNS1-203ENST00000334536 SMG6Q86US8 1419 aaKnown RBP27.55■■■□□ 2
SPNS1-203ENST00000334536 OSCARQ8IYS5 282 aa27.55■■■□□ 2
SPNS1-203ENST00000334536 CCDC144AA2RUR9 1427 aa27.55■■■□□ 2
SPNS1-203ENST00000334536 KDM2AQ9Y2K7 1162 aa27.55■■■□□ 2
SPNS1-203ENST00000334536 RSPH6AQ9H0K4 717 aa27.53■■■□□ 2
SPNS1-203ENST00000334536 MYO5CQ9NQX4 1742 aa27.53■■■□□ 2
SPNS1-203ENST00000334536 PRAG1Q86YV5 1406 aa27.53■■■□□ 2
SPNS1-203ENST00000334536 ST20-MTHFSA0A0A6YYL1 179 aa27.52■■■□□ 2
SPNS1-203ENST00000334536 IQGAP3Q86VI3 1631 aa27.51■■□□□ 1.99
SPNS1-203ENST00000334536 TRPM1Q7Z4N2 1603 aa27.5■■□□□ 1.99
SPNS1-203ENST00000334536 DUOX2Q9NRD8 1548 aa27.49■■□□□ 1.99
SPNS1-203ENST00000334536 E9PCH4 1651 aa27.49■■□□□ 1.99
SPNS1-203ENST00000334536 RALBP1Q15311 655 aa27.48■■□□□ 1.99
SPNS1-203ENST00000334536 PNISRQ8TF01 805 aaKnown RBP27.48■■□□□ 1.99
SPNS1-203ENST00000334536 GPRASP1Q5JY77 1395 aa27.48■■□□□ 1.99
SPNS1-203ENST00000334536 PLA2R1Q13018 1463 aa27.47■■□□□ 1.99
SPNS1-203ENST00000334536 LAMC1P11047 1609 aa27.47■■□□□ 1.99
SPNS1-203ENST00000334536 BRD4O60885 1362 aaPredicted RBP27.46■■□□□ 1.99
SPNS1-203ENST00000334536 ATP10AO60312 1499 aa27.46■■□□□ 1.99
SPNS1-203ENST00000334536 B4GALNT3Q6L9W6 998 aa27.46■■□□□ 1.99
SPNS1-203ENST00000334536 MAGI2Q86UL8 1455 aa27.45■■□□□ 1.99
SPNS1-203ENST00000334536 ERBINQ96RT1 1412 aa27.45■■□□□ 1.99
SPNS1-203ENST00000334536 PPM1GO15355 546 aaPredicted RBP27.45■■□□□ 1.99
SPNS1-203ENST00000334536 TMC1Q8TDI8 760 aa27.45■■□□□ 1.98
SPNS1-203ENST00000334536 NUDCQ9Y266 331 aa27.45■■□□□ 1.98
SPNS1-203ENST00000334536 GLIPR1L2Q4G1C9 344 aa27.44■■□□□ 1.98
SPNS1-203ENST00000334536 MYBBP1AQ9BQG0 1328 aaKnown RBP27.43■■□□□ 1.98
SPNS1-203ENST00000334536 UHRF1BP1LA0JNW5 1464 aa27.43■■□□□ 1.98
SPNS1-203ENST00000334536 PLCH2O75038 1416 aa27.43■■□□□ 1.98
SPNS1-203ENST00000334536 A2MP01023 1474 aa27.41■■□□□ 1.98
SPNS1-203ENST00000334536 LRPPRCP42704 1394 aaKnown RBP27.41■■□□□ 1.98
SPNS1-203ENST00000334536 RNF123Q5XPI4 1314 aa27.4■■□□□ 1.98
SPNS1-203ENST00000334536 EIF2AK4Q9P2K8 1649 aaKnown RBP27.4■■□□□ 1.98
SPNS1-203ENST00000334536 EFCAB2Q5VUJ9 269 aa27.38■■□□□ 1.97
SPNS1-203ENST00000334536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.36■■□□□ 1.97
SPNS1-203ENST00000334536 PRDM15P57071 1507 aaPredicted RBP27.36■■□□□ 1.97
SPNS1-203ENST00000334536 NEFMP07197 916 aa27.35■■□□□ 1.97
SPNS1-203ENST00000334536 ZCCHC11Q5TAX3 1644 aaKnown RBP27.35■■□□□ 1.97
SPNS1-203ENST00000334536 CNGB1Q14028 1251 aaPredicted RBP27.33■■□□□ 1.97
SPNS1-203ENST00000334536 ABCC1P33527 1531 aa27.33■■□□□ 1.97
SPNS1-203ENST00000334536 COL17A1Q9UMD9 1497 aaPredicted RBP27.32■■□□□ 1.96
SPNS1-203ENST00000334536 RGL3Q3MIN7 710 aa27.32■■□□□ 1.96
SPNS1-203ENST00000334536 PARD3Q8TEW0 1356 aa27.31■■□□□ 1.96
SPNS1-203ENST00000334536 NBPF1Q3BBV0 1214 aa27.3■■□□□ 1.96
SPNS1-203ENST00000334536 ARAP3Q8WWN8 1544 aa27.3■■□□□ 1.96
SPNS1-203ENST00000334536 NLRP13Q86W25 1043 aa27.28■■□□□ 1.96
SPNS1-203ENST00000334536 RTEL1-TNFRSF6BF6WH68 1400 aa27.28■■□□□ 1.96
SPNS1-203ENST00000334536 FAM43AQ8N2R8 423 aa27.27■■□□□ 1.96
SPNS1-203ENST00000334536 GSE1Q14687 1217 aa27.26■■□□□ 1.95
SPNS1-203ENST00000334536 PER1O15534 1290 aaPredicted RBP27.25■■□□□ 1.95
SPNS1-203ENST00000334536 TESK2Q96S53 571 aa27.25■■□□□ 1.95
SPNS1-203ENST00000334536 INSRP06213 1382 aa27.24■■□□□ 1.95
SPNS1-203ENST00000334536 TRAPPC8Q9Y2L5 1435 aa27.23■■□□□ 1.95
SPNS1-203ENST00000334536 RNF17Q9BXT8 1623 aaKnown RBP27.23■■□□□ 1.95
SPNS1-203ENST00000334536 STAC3Q96MF2 364 aa27.22■■□□□ 1.95
SPNS1-203ENST00000334536 BRPF3Q9ULD4 1205 aa27.22■■□□□ 1.95
SPNS1-203ENST00000334536 TMF1P82094 1093 aa27.2■■□□□ 1.94
SPNS1-203ENST00000334536 ZMYM4Q5VZL5 1548 aa27.2■■□□□ 1.94
SPNS1-203ENST00000334536 DISP3Q9P2K9 1392 aa27.18■■□□□ 1.94
SPNS1-203ENST00000334536 PDE3BQ13370 1112 aa27.18■■□□□ 1.94
SPNS1-203ENST00000334536 SPAG9O60271 1321 aaKnown RBP27.18■■□□□ 1.94
SPNS1-203ENST00000334536 TRPM2O94759 1503 aa27.16■■□□□ 1.94
SPNS1-203ENST00000334536 ZFYVE16Q7Z3T8 1539 aa27.15■■□□□ 1.94
SPNS1-203ENST00000334536 PTPRTO14522 1441 aa27.14■■□□□ 1.94
SPNS1-203ENST00000334536 DEPDC5O75140 1603 aa27.13■■□□□ 1.93
SPNS1-203ENST00000334536 MADDQ8WXG6 1647 aa27.12■■□□□ 1.93
SPNS1-203ENST00000334536 TCERG1O14776 1098 aaKnown RBP27.11■■□□□ 1.93
SPNS1-203ENST00000334536 PANK3Q9H999 370 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms