RNA–Protein interactions for RNA: ENST00000332904.7

CDHR1-201, Transcript of cadherin related family member 1, humanhuman

TSL 1 (best) BASIC

Gene CDHR1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-201ENST00000332904 KIAA1107Q9UPP5 1409 aa23.52■■□□□ 1.35
CDHR1-201ENST00000332904 PARD3Q8TEW0 1356 aa23.51■■□□□ 1.35
CDHR1-201ENST00000332904 NESP48681 1621 aa23.51■■□□□ 1.35
CDHR1-201ENST00000332904 SLKQ9H2G2 1235 aaPredicted RBP23.5■■□□□ 1.35
CDHR1-201ENST00000332904 RALGAPBQ86X10 1494 aa23.48■■□□□ 1.35
CDHR1-201ENST00000332904 DNMT1P26358 1616 aaKnown RBP23.47■■□□□ 1.35
CDHR1-201ENST00000332904 PER1O15534 1290 aaPredicted RBP23.45■■□□□ 1.34
CDHR1-201ENST00000332904 SEC24BO95487 1268 aa23.43■■□□□ 1.34
CDHR1-201ENST00000332904 E9PCH4 1651 aa23.43■■□□□ 1.34
CDHR1-201ENST00000332904 VSIG10Q8N0Z9 540 aa23.42■■□□□ 1.34
CDHR1-201ENST00000332904 USP19O94966 1318 aa23.42■■□□□ 1.34
CDHR1-201ENST00000332904 UHRF1BP1Q6BDS2 1440 aa23.42■■□□□ 1.34
CDHR1-201ENST00000332904 ZNF777Q9ULD5 760 aaPredicted RBP23.42■■□□□ 1.34
CDHR1-201ENST00000332904 BLMP54132 1417 aaPredicted RBP23.41■■□□□ 1.34
CDHR1-201ENST00000332904 ADAMTS8Q9UP79 889 aa23.41■■□□□ 1.34
CDHR1-201ENST00000332904 NAP1L5Q96NT1 182 aaPredicted RBP23.4■■□□□ 1.34
CDHR1-201ENST00000332904 DUSP27Q5VZP5 1158 aa23.39■■□□□ 1.33
CDHR1-201ENST00000332904 GAPVD1Q14C86 1478 aa23.38■■□□□ 1.33
CDHR1-201ENST00000332904 ZMYND15Q9H091 742 aa23.37■■□□□ 1.33
CDHR1-201ENST00000332904 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
CDHR1-201ENST00000332904 PLEKHH1Q9ULM0 1364 aa23.37■■□□□ 1.33
CDHR1-201ENST00000332904 KIAA0586Q9BVV6 1533 aa23.36■■□□□ 1.33
CDHR1-201ENST00000332904 LAMC3Q9Y6N6 1575 aa23.36■■□□□ 1.33
CDHR1-201ENST00000332904 PANK2Q9BZ23 570 aa23.35■■□□□ 1.33
CDHR1-201ENST00000332904 ZMYM4Q5VZL5 1548 aa23.35■■□□□ 1.33
CDHR1-201ENST00000332904 PANK3Q9H999 370 aa23.34■■□□□ 1.33
CDHR1-201ENST00000332904 NBPF1Q3BBV0 1214 aa23.34■■□□□ 1.33
CDHR1-201ENST00000332904 GZF1Q9H116 711 aaPredicted RBP23.34■■□□□ 1.33
CDHR1-201ENST00000332904 WDR62O43379 1518 aa23.33■■□□□ 1.32
CDHR1-201ENST00000332904 IGHDP01880 384 aa23.33■■□□□ 1.32
CDHR1-201ENST00000332904 XRCC6P12956 609 aaKnown RBP eCLIP23.33■■□□□ 1.32
CDHR1-201ENST00000332904 GLIPR1L2Q4G1C9 344 aa23.33■■□□□ 1.32
CDHR1-201ENST00000332904 L1TD1Q5T7N2 865 aaKnown RBP23.33■■□□□ 1.32
CDHR1-201ENST00000332904 NUP155O75694 1391 aa23.32■■□□□ 1.32
CDHR1-201ENST00000332904 CFDP1Q9UEE9 299 aaPredicted RBP23.31■■□□□ 1.32
CDHR1-201ENST00000332904 PNNQ9H307 717 aaKnown RBP23.31■■□□□ 1.32
CDHR1-201ENST00000332904 SPRYD3Q8NCJ5 442 aa23.3■■□□□ 1.32
CDHR1-201ENST00000332904 ZNF608Q9ULD9 1512 aaPredicted RBP23.3■■□□□ 1.32
CDHR1-201ENST00000332904 BCAR3O75815 825 aa23.29■■□□□ 1.32
CDHR1-201ENST00000332904 DISP3Q9P2K9 1392 aa23.27■■□□□ 1.32
CDHR1-201ENST00000332904 HSP90AA2PQ14568 343 aaPredicted RBP23.27■■□□□ 1.32
CDHR1-201ENST00000332904 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.27■■□□□ 1.32
CDHR1-201ENST00000332904 ANTXR1Q9H6X2 564 aa23.27■■□□□ 1.32
CDHR1-201ENST00000332904 CAMSAP2Q08AD1 1489 aa23.27■■□□□ 1.32
CDHR1-201ENST00000332904 GOLGA2Q08379 1002 aa23.26■■□□□ 1.31
CDHR1-201ENST00000332904 BECN1Q14457 450 aa23.26■■□□□ 1.31
CDHR1-201ENST00000332904 RGL3Q3MIN7 710 aa23.26■■□□□ 1.31
CDHR1-201ENST00000332904 URB2Q14146 1524 aaKnown RBP23.26■■□□□ 1.31
CDHR1-201ENST00000332904 SPINK5Q9NQ38 1064 aaPredicted RBP23.26■■□□□ 1.31
CDHR1-201ENST00000332904 ANKRD50Q9ULJ7 1429 aa23.25■■□□□ 1.31
CDHR1-201ENST00000332904 PLEKHH2Q8IVE3 1493 aa23.25■■□□□ 1.31
CDHR1-201ENST00000332904 ARHGEF12Q9NZN5 1544 aa23.24■■□□□ 1.31
CDHR1-201ENST00000332904 GOLGA6L3A6NEY3 463 aa23.24■■□□□ 1.31
CDHR1-201ENST00000332904 HSP90AA1P07900 732 aaKnown RBP23.23■■□□□ 1.31
CDHR1-201ENST00000332904 CCDC146Q8IYE0 955 aa23.23■■□□□ 1.31
CDHR1-201ENST00000332904 WDR43Q15061 677 aaKnown RBP eCLIP23.22■■□□□ 1.31
CDHR1-201ENST00000332904 ZNF521Q96K83 1311 aa23.21■■□□□ 1.31
CDHR1-201ENST00000332904 CLCN1P35523 988 aa23.21■■□□□ 1.31
CDHR1-201ENST00000332904 PRG4Q92954 1404 aaPredicted RBP23.2■■□□□ 1.31
CDHR1-201ENST00000332904 IQGAP2Q13576 1575 aa23.2■■□□□ 1.3
CDHR1-201ENST00000332904 ANKRD30AQ9BXX3 1397 aa23.2■■□□□ 1.3
CDHR1-201ENST00000332904 TESK2Q96S53 571 aa23.19■■□□□ 1.3
CDHR1-201ENST00000332904 SLFN5Q08AF3 891 aa23.19■■□□□ 1.3
CDHR1-201ENST00000332904 TBC1D2Q9BYX2 928 aa23.19■■□□□ 1.3
CDHR1-201ENST00000332904 INSRP06213 1382 aa23.19■■□□□ 1.3
CDHR1-201ENST00000332904 FSD2A1L4K1 749 aa23.18■■□□□ 1.3
CDHR1-201ENST00000332904 NLRP1Q9C000 1473 aa23.17■■□□□ 1.3
CDHR1-201ENST00000332904 ADGBQ8N7X0 1667 aa23.17■■□□□ 1.3
CDHR1-201ENST00000332904 VIRMAQ69YN4 1812 aaKnown RBP23.16■■□□□ 1.3
CDHR1-201ENST00000332904 NUP153P49790 1475 aaKnown RBP23.16■■□□□ 1.3
CDHR1-201ENST00000332904 EIF3AQ14152 1382 aaKnown RBP23.15■■□□□ 1.3
CDHR1-201ENST00000332904 PPP2R1AP30153 589 aa23.15■■□□□ 1.3
CDHR1-201ENST00000332904 COL17A1Q9UMD9 1497 aaPredicted RBP23.15■■□□□ 1.3
CDHR1-201ENST00000332904 PANK1Q8TE04 598 aa23.15■■□□□ 1.3
CDHR1-201ENST00000332904 COG6Q9Y2V7 657 aa23.15■■□□□ 1.3
CDHR1-201ENST00000332904 RRP9O43818 475 aaKnown RBP23.14■■□□□ 1.29
CDHR1-201ENST00000332904 PRAG1Q86YV5 1406 aa23.13■■□□□ 1.29
CDHR1-201ENST00000332904 MCM4P33991 863 aa23.13■■□□□ 1.29
CDHR1-201ENST00000332904 DMRT2Q9Y5R5 561 aa23.13■■□□□ 1.29
CDHR1-201ENST00000332904 ADGRL2O95490 1459 aa23.13■■□□□ 1.29
CDHR1-201ENST00000332904 APAF1O14727 1248 aa23.11■■□□□ 1.29
CDHR1-201ENST00000332904 ERBB4Q15303 1308 aa23.11■■□□□ 1.29
CDHR1-201ENST00000332904 GPATCH8Q9UKJ3 1502 aaKnown RBP23.1■■□□□ 1.29
CDHR1-201ENST00000332904 KDM5DQ9BY66 1539 aa23.1■■□□□ 1.29
CDHR1-201ENST00000332904 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
CDHR1-201ENST00000332904 TRPM1Q7Z4N2 1603 aa23.09■■□□□ 1.29
CDHR1-201ENST00000332904 MAPK8IP3Q9UPT6 1336 aa23.09■■□□□ 1.29
CDHR1-201ENST00000332904 CLUAP1Q96AJ1 413 aa23.09■■□□□ 1.29
CDHR1-201ENST00000332904 TBC1D32Q96NH3 1257 aa23.09■■□□□ 1.29
CDHR1-201ENST00000332904 ERBINQ96RT1 1412 aa23.08■■□□□ 1.29
CDHR1-201ENST00000332904 TRAK2O60296 914 aa23.08■■□□□ 1.29
CDHR1-201ENST00000332904 TRMT2AQ8IZ69 625 aaKnown RBP23.07■■□□□ 1.28
CDHR1-201ENST00000332904 CANXP27824 592 aaKnown RBP23.07■■□□□ 1.28
CDHR1-201ENST00000332904 TMF1P82094 1093 aa23.07■■□□□ 1.28
CDHR1-201ENST00000332904 UPF2Q9HAU5 1272 aaKnown RBP23.06■■□□□ 1.28
CDHR1-201ENST00000332904 KNSTRNQ9Y448 316 aa23.06■■□□□ 1.28
CDHR1-201ENST00000332904 PDS5BQ9NTI5 1447 aa23.05■■□□□ 1.28
CDHR1-201ENST00000332904 NKTRP30414 1462 aaKnown RBP23.05■■□□□ 1.28
CDHR1-201ENST00000332904 CROCC2H7BZ55 1655 aa23.05■■□□□ 1.28
CDHR1-201ENST00000332904 ESPNB1AK53 854 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms