RNA–Protein interactions for RNA: ENST00000332512.7

RIPK4-201, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK4, Length 3,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-201ENST00000332512 PANK1Q8TE04 598 aa17.33■□□□□ 0.36
RIPK4-201ENST00000332512 ANKRD30BQ9BXX2 1392 aa17.33■□□□□ 0.36
RIPK4-201ENST00000332512 TOPBP1Q92547 1522 aa17.33■□□□□ 0.36
RIPK4-201ENST00000332512 KIF3BO15066 747 aa17.32■□□□□ 0.36
RIPK4-201ENST00000332512 FRAT2O75474 233 aaPredicted RBP17.32■□□□□ 0.36
RIPK4-201ENST00000332512 ANP32BQ92688 251 aaKnown RBP17.32■□□□□ 0.36
RIPK4-201ENST00000332512 APBB1O00213 710 aa17.31■□□□□ 0.36
RIPK4-201ENST00000332512 SMG6Q86US8 1419 aaKnown RBP17.31■□□□□ 0.36
RIPK4-201ENST00000332512 BCAR3O75815 825 aa17.31■□□□□ 0.36
RIPK4-201ENST00000332512 CENPQQ7L2Z9 268 aaPredicted RBP17.31■□□□□ 0.36
RIPK4-201ENST00000332512 TRIM44Q96DX7 344 aaPredicted RBP17.3■□□□□ 0.36
RIPK4-201ENST00000332512 CENPJQ9HC77 1338 aaPredicted RBP17.3■□□□□ 0.36
RIPK4-201ENST00000332512 MAPK8IP3Q9UPT6 1336 aa17.3■□□□□ 0.36
RIPK4-201ENST00000332512 NCOA1Q15788 1441 aa17.29■□□□□ 0.36
RIPK4-201ENST00000332512 PEG3Q9GZU2 1588 aa17.29■□□□□ 0.36
RIPK4-201ENST00000332512 MS4A1P11836 297 aa17.28■□□□□ 0.36
RIPK4-201ENST00000332512 ITPRIPQ8IWB1 547 aa17.28■□□□□ 0.36
RIPK4-201ENST00000332512 CARMIL2Q6F5E8 1435 aa17.28■□□□□ 0.36
RIPK4-201ENST00000332512 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.28■□□□□ 0.36
RIPK4-201ENST00000332512 SOX12O15370 315 aa17.28■□□□□ 0.36
RIPK4-201ENST00000332512 SRPK2P78362 688 aaKnown RBP17.28■□□□□ 0.36
RIPK4-201ENST00000332512 PRDM2Q13029 1718 aa17.28■□□□□ 0.36
RIPK4-201ENST00000332512 ZBTB7CA1YPR0 619 aa17.27■□□□□ 0.36
RIPK4-201ENST00000332512 NPM1P06748 294 aaKnown RBP eCLIP17.27■□□□□ 0.36
RIPK4-201ENST00000332512 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.35
RIPK4-201ENST00000332512 BIVM-ERCC5R4GMW8 1640 aa17.26■□□□□ 0.35
RIPK4-201ENST00000332512 USP35Q9P2H5 1018 aa17.26■□□□□ 0.35
RIPK4-201ENST00000332512 PTPN23Q9H3S7 1636 aa17.25■□□□□ 0.35
RIPK4-201ENST00000332512 ELL2O00472 640 aaPredicted RBP17.25■□□□□ 0.35
RIPK4-201ENST00000332512 HSP90AB1P08238 724 aaKnown RBP17.25■□□□□ 0.35
RIPK4-201ENST00000332512 DAPK1P53355 1430 aa17.25■□□□□ 0.35
RIPK4-201ENST00000332512 SMC4Q9NTJ3 1288 aa17.23■□□□□ 0.35
RIPK4-201ENST00000332512 POGKQ9P215 609 aa17.23■□□□□ 0.35
RIPK4-201ENST00000332512 EFCAB5A4FU69 1503 aa17.23■□□□□ 0.35
RIPK4-201ENST00000332512 MYH16Q9H6N6 1097 aa17.22■□□□□ 0.35
RIPK4-201ENST00000332512 HMGXB3Q12766 1538 aa17.22■□□□□ 0.35
RIPK4-201ENST00000332512 KIAA1107Q9UPP5 1409 aa17.22■□□□□ 0.35
RIPK4-201ENST00000332512 MAP3K1Q13233 1512 aa17.22■□□□□ 0.35
RIPK4-201ENST00000332512 PPP2R1AP30153 589 aa17.22■□□□□ 0.35
RIPK4-201ENST00000332512 EPRSP07814 1512 aaKnown RBP17.21■□□□□ 0.35
RIPK4-201ENST00000332512 EFCAB2Q5VUJ9 269 aa17.21■□□□□ 0.34
RIPK4-201ENST00000332512 HSCBQ8IWL3 235 aa17.21■□□□□ 0.34
RIPK4-201ENST00000332512 ABCC5O15440 1437 aa17.2■□□□□ 0.34
RIPK4-201ENST00000332512 EHBP1L1Q8N3D4 1523 aa17.19■□□□□ 0.34
RIPK4-201ENST00000332512 ARID3AQ99856 593 aa17.19■□□□□ 0.34
RIPK4-201ENST00000332512 RWDD1Q9H446 243 aaPredicted RBP17.19■□□□□ 0.34
RIPK4-201ENST00000332512 CFAP70Q5T0N1 1121 aa17.18■□□□□ 0.34
RIPK4-201ENST00000332512 SPAG9O60271 1321 aaKnown RBP17.17■□□□□ 0.34
RIPK4-201ENST00000332512 AFAP1Q8N556 730 aa17.17■□□□□ 0.34
RIPK4-201ENST00000332512 TMEM132EQ6IEE7 984 aa17.17■□□□□ 0.34
RIPK4-201ENST00000332512 SUPT6HQ7KZ85 1726 aaKnown RBP17.16■□□□□ 0.34
RIPK4-201ENST00000332512 E9PSI1 815 aa17.16■□□□□ 0.34
RIPK4-201ENST00000332512 MIA2Q96PC5 1412 aa17.16■□□□□ 0.34
RIPK4-201ENST00000332512 ABCA10Q8WWZ4 1543 aa17.15■□□□□ 0.34
RIPK4-201ENST00000332512 RPRD2Q5VT52 1461 aaKnown RBP17.15■□□□□ 0.34
RIPK4-201ENST00000332512 PTPRGP23470 1445 aa17.13■□□□□ 0.33
RIPK4-201ENST00000332512 PMFBP1Q8TBY8 1022 aa17.12■□□□□ 0.33
RIPK4-201ENST00000332512 GOLGA6L22H0YM25 854 aa17.12■□□□□ 0.33
RIPK4-201ENST00000332512 GOLGA6L3A6NEY3 463 aa17.12■□□□□ 0.33
RIPK4-201ENST00000332512 GLIPR1L2Q4G1C9 344 aa17.11■□□□□ 0.33
RIPK4-201ENST00000332512 PNNQ9H307 717 aaKnown RBP17.11■□□□□ 0.33
RIPK4-201ENST00000332512 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.11■□□□□ 0.33
RIPK4-201ENST00000332512 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
RIPK4-201ENST00000332512 MLECQ14165 292 aa17.1■□□□□ 0.33
RIPK4-201ENST00000332512 L1TD1Q5T7N2 865 aaKnown RBP17.1■□□□□ 0.33
RIPK4-201ENST00000332512 FOXD4L5Q5VV16 416 aaPredicted RBP17.1■□□□□ 0.33
RIPK4-201ENST00000332512 FOXD4L4Q8WXT5 416 aaPredicted RBP17.1■□□□□ 0.33
RIPK4-201ENST00000332512 C9orf84Q5VXU9 1444 aa17.1■□□□□ 0.33
RIPK4-201ENST00000332512 SLC12A5Q9H2X9 1139 aa17.1■□□□□ 0.33
RIPK4-201ENST00000332512 ESF1Q9H501 851 aaKnown RBP17.1■□□□□ 0.33
RIPK4-201ENST00000332512 CGNL1Q0VF96 1302 aa17.09■□□□□ 0.33
RIPK4-201ENST00000332512 TCP11L2Q8N4U5 519 aa17.09■□□□□ 0.33
RIPK4-201ENST00000332512 PLCB2Q00722 1185 aa17.09■□□□□ 0.33
RIPK4-201ENST00000332512 KANK1Q14678 1352 aa17.09■□□□□ 0.33
RIPK4-201ENST00000332512 PLB1Q6P1J6 1458 aa17.09■□□□□ 0.33
RIPK4-201ENST00000332512 TSR2Q969E8 191 aaKnown RBP17.08■□□□□ 0.32
RIPK4-201ENST00000332512 LNPKQ9C0E8 428 aa17.08■□□□□ 0.32
RIPK4-201ENST00000332512 MTHFSP49914 203 aa17.08■□□□□ 0.32
RIPK4-201ENST00000332512 RSPH4AQ5TD94 716 aa17.08■□□□□ 0.32
RIPK4-201ENST00000332512 DNMBPQ6XZF7 1577 aa17.07■□□□□ 0.32
RIPK4-201ENST00000332512 NUTM2FA1L443 756 aa17.07■□□□□ 0.32
RIPK4-201ENST00000332512 NOL8Q76FK4 1167 aaKnown RBP17.06■□□□□ 0.32
RIPK4-201ENST00000332512 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
RIPK4-201ENST00000332512 TROQ12816 1431 aaPredicted RBP17.06■□□□□ 0.32
RIPK4-201ENST00000332512 C14orf37Q86TY3 774 aa17.05■□□□□ 0.32
RIPK4-201ENST00000332512 DHX29Q7Z478 1369 aaKnown RBP17.05■□□□□ 0.32
RIPK4-201ENST00000332512 ANKRD45Q5TZF3 282 aa17.05■□□□□ 0.32
RIPK4-201ENST00000332512 GGNBP2Q9H3C7 697 aa17.05■□□□□ 0.32
RIPK4-201ENST00000332512 FOXD4L6Q3SYB3 417 aaPredicted RBP17.05■□□□□ 0.32
RIPK4-201ENST00000332512 FOXD4L3Q6VB84 417 aaPredicted RBP17.05■□□□□ 0.32
RIPK4-201ENST00000332512 PDZRN3Q9UPQ7 1066 aa17.04■□□□□ 0.32
RIPK4-201ENST00000332512 PTMAP06454 111 aaKnown RBP17.04■□□□□ 0.32
RIPK4-201ENST00000332512 ZKSCAN2Q63HK3 967 aa17.03■□□□□ 0.32
RIPK4-201ENST00000332512 DUSP27Q5VZP5 1158 aa17.03■□□□□ 0.32
RIPK4-201ENST00000332512 URB2Q14146 1524 aaKnown RBP17.03■□□□□ 0.32
RIPK4-201ENST00000332512 ROCK1Q13464 1354 aa17.03■□□□□ 0.32
RIPK4-201ENST00000332512 DISP3Q9P2K9 1392 aa17.03■□□□□ 0.32
RIPK4-201ENST00000332512 MINK1Q8N4C8 1332 aaPredicted RBP17.02■□□□□ 0.32
RIPK4-201ENST00000332512 GRIN2BQ13224 1484 aa17.02■□□□□ 0.31
RIPK4-201ENST00000332512 SNAPC4Q5SXM2 1469 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms