RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 DEPDC5O75140 1603 aa14.06□□□□□ -0.16
C11orf54-201ENST00000331239 RNF17Q9BXT8 1623 aaKnown RBP14.05□□□□□ -0.16
C11orf54-201ENST00000331239 RRP7BPQ9NSQ0 103 aa14.05□□□□□ -0.16
C11orf54-201ENST00000331239 CLSPNQ9HAW4 1339 aa14.03□□□□□ -0.16
C11orf54-201ENST00000331239 PHF23Q9BUL5 403 aaPredicted RBP14.01□□□□□ -0.17
C11orf54-201ENST00000331239 MYT1LQ9UL68 1186 aa14.01□□□□□ -0.17
C11orf54-201ENST00000331239 PRDM15P57071 1507 aaPredicted RBP14□□□□□ -0.17
C11orf54-201ENST00000331239 IQGAP3Q86VI3 1631 aa14□□□□□ -0.17
C11orf54-201ENST00000331239 YEATS2Q9ULM3 1422 aa14□□□□□ -0.17
C11orf54-201ENST00000331239 VWDEQ8N2E2 1590 aa14□□□□□ -0.17
C11orf54-201ENST00000331239 LMTK2Q8IWU2 1503 aa13.99□□□□□ -0.17
C11orf54-201ENST00000331239 ZC3H13Q5T200 1668 aaKnown RBP13.99□□□□□ -0.17
C11orf54-201ENST00000331239 KANK1Q14678 1352 aa13.99□□□□□ -0.17
C11orf54-201ENST00000331239 MROH1Q8NDA8 1641 aa13.95□□□□□ -0.18
C11orf54-201ENST00000331239 TET3O43151 1660 aa13.94□□□□□ -0.18
C11orf54-201ENST00000331239 NUP155O75694 1391 aa13.93□□□□□ -0.18
C11orf54-201ENST00000331239 DHX57Q6P158 1386 aaKnown RBP13.93□□□□□ -0.18
C11orf54-201ENST00000331239 PZPP20742 1482 aa13.93□□□□□ -0.18
C11orf54-201ENST00000331239 KIF3BO15066 747 aa13.93□□□□□ -0.18
C11orf54-201ENST00000331239 CCER1Q8TC90 406 aaPredicted RBP13.93□□□□□ -0.18
C11orf54-201ENST00000331239 RPRD2Q5VT52 1461 aaKnown RBP13.92□□□□□ -0.18
C11orf54-201ENST00000331239 ARHGAP31Q2M1Z3 1444 aa13.92□□□□□ -0.18
C11orf54-201ENST00000331239 TRIM52Q96A61 297 aa13.91□□□□□ -0.18
C11orf54-201ENST00000331239 MPHOSPH9Q99550 1183 aa13.91□□□□□ -0.18
C11orf54-201ENST00000331239 CNTLNQ9NXG0 1405 aa13.91□□□□□ -0.18
C11orf54-201ENST00000331239 MROH2AA6NES4 1674 aa13.89□□□□□ -0.19
C11orf54-201ENST00000331239 ABCC3O15438 1527 aa13.89□□□□□ -0.19
C11orf54-201ENST00000331239 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
C11orf54-201ENST00000331239 EFCAB6Q5THR3 1501 aa13.87□□□□□ -0.19
C11orf54-201ENST00000331239 SIGLEC1Q9BZZ2 1709 aa13.86□□□□□ -0.19
C11orf54-201ENST00000331239 TIMELESSQ9UNS1 1208 aa13.86□□□□□ -0.19
C11orf54-201ENST00000331239 CAMSAP1Q5T5Y3 1602 aa13.85□□□□□ -0.19
C11orf54-201ENST00000331239 WASHC2CQ9Y4E1 1318 aa13.84□□□□□ -0.19
C11orf54-201ENST00000331239 PTPRTO14522 1441 aa13.84□□□□□ -0.19
C11orf54-201ENST00000331239 CEP152O94986 1710 aa13.84□□□□□ -0.19
C11orf54-201ENST00000331239 E9PCH4 1651 aa13.84□□□□□ -0.19
C11orf54-201ENST00000331239 NEURL4Q96JN8 1562 aa13.83□□□□□ -0.2
C11orf54-201ENST00000331239 ANKRD30BQ9BXX2 1392 aa13.83□□□□□ -0.2
C11orf54-201ENST00000331239 GGT6Q6P531 493 aa13.83□□□□□ -0.2
C11orf54-201ENST00000331239 PKD2Q13563 968 aa13.82□□□□□ -0.2
C11orf54-201ENST00000331239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.82□□□□□ -0.2
C11orf54-201ENST00000331239 ADAMTSL3P82987 1691 aa13.81□□□□□ -0.2
C11orf54-201ENST00000331239 SPHKAPQ2M3C7 1700 aa13.81□□□□□ -0.2
C11orf54-201ENST00000331239 TRPM2O94759 1503 aa13.81□□□□□ -0.2
C11orf54-201ENST00000331239 ESF1Q9H501 851 aaKnown RBP13.8□□□□□ -0.2
C11orf54-201ENST00000331239 ARID4BQ4LE39 1312 aaPredicted RBP13.8□□□□□ -0.2
C11orf54-201ENST00000331239 PELP1Q8IZL8 1130 aaKnown RBP13.8□□□□□ -0.2
C11orf54-201ENST00000331239 CLTCQ00610 1675 aaKnown RBP13.79□□□□□ -0.2
C11orf54-201ENST00000331239 FER1L4A9Z1Z3 1794 aa13.79□□□□□ -0.2
C11orf54-201ENST00000331239 NOS1P29475 1434 aa13.79□□□□□ -0.2
C11orf54-201ENST00000331239 NPATQ14207 1427 aa13.78□□□□□ -0.2
C11orf54-201ENST00000331239 SPATA31D1Q6ZQQ2 1576 aa13.77□□□□□ -0.21
C11orf54-201ENST00000331239 STAC3Q96MF2 364 aa13.77□□□□□ -0.21
C11orf54-201ENST00000331239 PREX1Q8TCU6 1659 aa13.76□□□□□ -0.21
C11orf54-201ENST00000331239 ZMYM3Q14202 1370 aa13.76□□□□□ -0.21
C11orf54-201ENST00000331239 SLC52A1Q9NWF4 448 aa13.75□□□□□ -0.21
C11orf54-201ENST00000331239 PLA2R1Q13018 1463 aa13.75□□□□□ -0.21
C11orf54-201ENST00000331239 KDM5AP29375 1690 aaKnown RBP13.75□□□□□ -0.21
C11orf54-201ENST00000331239 PIK3C2BO00750 1634 aa13.74□□□□□ -0.21
C11orf54-201ENST00000331239 CCDC144AA2RUR9 1427 aa13.74□□□□□ -0.21
C11orf54-201ENST00000331239 ERVK-7P63135 1459 aa13.74□□□□□ -0.21
C11orf54-201ENST00000331239 KIF1BO60333 1816 aa13.71□□□□□ -0.21
C11orf54-201ENST00000331239 C3P01024 1663 aa13.71□□□□□ -0.21
C11orf54-201ENST00000331239 MADDQ8WXG6 1647 aa13.71□□□□□ -0.21
C11orf54-201ENST00000331239 MYT1Q01538 1121 aa13.7□□□□□ -0.22
C11orf54-201ENST00000331239 SETD1BQ9UPS6 1966 aaKnown RBP13.7□□□□□ -0.22
C11orf54-201ENST00000331239 NLRP1Q9C000 1473 aa13.7□□□□□ -0.22
C11orf54-201ENST00000331239 MLECQ14165 292 aa13.69□□□□□ -0.22
C11orf54-201ENST00000331239 SYNMO15061 1565 aa13.69□□□□□ -0.22
C11orf54-201ENST00000331239 CLTCL1P53675 1640 aa13.68□□□□□ -0.22
C11orf54-201ENST00000331239 RIMS1Q86UR5 1692 aaKnown RBP13.68□□□□□ -0.22
C11orf54-201ENST00000331239 RPGRIP1LQ68CZ1 1315 aa13.68□□□□□ -0.22
C11orf54-201ENST00000331239 SPATA31E1Q6ZUB1 1445 aa13.67□□□□□ -0.22
C11orf54-201ENST00000331239 TNRQ92752 1358 aa13.66□□□□□ -0.22
C11orf54-201ENST00000331239 ADGRB3O60242 1522 aa13.66□□□□□ -0.22
C11orf54-201ENST00000331239 FOXD1Q16676 465 aa13.65□□□□□ -0.22
C11orf54-201ENST00000331239 TONSLQ96HA7 1378 aa13.65□□□□□ -0.22
C11orf54-201ENST00000331239 CFAP65Q6ZU64 1925 aaKnown RBP13.65□□□□□ -0.23
C11orf54-201ENST00000331239 PTPRMP28827 1452 aa13.63□□□□□ -0.23
C11orf54-201ENST00000331239 TMEM131LA2VDJ0 1609 aa13.63□□□□□ -0.23
C11orf54-201ENST00000331239 SIN3AQ96ST3 1273 aa13.63□□□□□ -0.23
C11orf54-201ENST00000331239 ZFYVE9O95405 1425 aa13.63□□□□□ -0.23
C11orf54-201ENST00000331239 ZNF142P52746 1687 aaPredicted RBP13.62□□□□□ -0.23
C11orf54-201ENST00000331239 UHRF1BP1Q6BDS2 1440 aa13.62□□□□□ -0.23
C11orf54-201ENST00000331239 DIEXFQ68CQ4 756 aaKnown RBP13.61□□□□□ -0.23
C11orf54-201ENST00000331239 MYOM2P54296 1465 aa13.61□□□□□ -0.23
C11orf54-201ENST00000331239 IFT172Q9UG01 1749 aa13.61□□□□□ -0.23
C11orf54-201ENST00000331239 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
C11orf54-201ENST00000331239 HDGFP51858 240 aaKnown RBP13.6□□□□□ -0.23
C11orf54-201ENST00000331239 IDI1Q13907 227 aa13.6□□□□□ -0.23
C11orf54-201ENST00000331239 PPP1R15AO75807 674 aaPredicted RBP13.59□□□□□ -0.23
C11orf54-201ENST00000331239 NEUROD1Q13562 356 aa13.59□□□□□ -0.23
C11orf54-201ENST00000331239 FBXO31Q5XUX0 539 aaPredicted RBP13.59□□□□□ -0.23
C11orf54-201ENST00000331239 MYO3AQ8NEV4 1616 aa13.59□□□□□ -0.23
C11orf54-201ENST00000331239 PPLO60437 1756 aa13.58□□□□□ -0.23
C11orf54-201ENST00000331239 UBR1Q8IWV7 1749 aa13.58□□□□□ -0.24
C11orf54-201ENST00000331239 KIAA1210Q9ULL0 1709 aa13.57□□□□□ -0.24
C11orf54-201ENST00000331239 L3MBTL2Q969R5 705 aa13.57□□□□□ -0.24
C11orf54-201ENST00000331239 NRXN1Q9ULB1 1477 aa13.57□□□□□ -0.24
C11orf54-201ENST00000331239 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms