RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 NBR1Q14596 966 aa9.4□□□□□ -0.9
SKP1-201ENST00000328392 EPAS1Q99814 870 aa9.4□□□□□ -0.9
SKP1-201ENST00000328392 FBXW7Q969H0 707 aa9.39□□□□□ -0.91
SKP1-201ENST00000328392 COL9A1P20849 921 aa9.38□□□□□ -0.91
SKP1-201ENST00000328392 MLLT3P42568 568 aaPredicted RBP9.38□□□□□ -0.91
SKP1-201ENST00000328392 ADGRD1Q6QNK2 874 aa9.38□□□□□ -0.91
SKP1-201ENST00000328392 P3H3Q8IVL6 736 aa9.38□□□□□ -0.91
SKP1-201ENST00000328392 C6orf132Q5T0Z8 1188 aa9.37□□□□□ -0.91
SKP1-201ENST00000328392 OSBPP22059 807 aa9.36□□□□□ -0.91
SKP1-201ENST00000328392 TSR1Q2NL82 804 aaKnown RBP9.36□□□□□ -0.91
SKP1-201ENST00000328392 KCNH8Q96L42 1107 aa9.36□□□□□ -0.91
SKP1-201ENST00000328392 SEMA3EO15041 775 aa9.35□□□□□ -0.91
SKP1-201ENST00000328392 EN1Q05925 392 aaPredicted RBP9.35□□□□□ -0.91
SKP1-201ENST00000328392 ZBED2Q9BTP6 218 aa9.35□□□□□ -0.91
SKP1-201ENST00000328392 VPS9D1Q9Y2B5 631 aa9.35□□□□□ -0.91
SKP1-201ENST00000328392 TK2O00142 265 aa9.34□□□□□ -0.91
SKP1-201ENST00000328392 MAP3K7O43318 606 aa9.34□□□□□ -0.91
SKP1-201ENST00000328392 PPP1R3GB7ZBB8 358 aa9.33□□□□□ -0.92
SKP1-201ENST00000328392 HRO43593 1189 aa9.33□□□□□ -0.92
SKP1-201ENST00000328392 PROX2Q3B8N5 592 aa9.32□□□□□ -0.92
SKP1-201ENST00000328392 MYT1LQ9UL68 1186 aa9.32□□□□□ -0.92
SKP1-201ENST00000328392 SLC4A5Q9BY07 1137 aa9.31□□□□□ -0.92
SKP1-201ENST00000328392 CDHR5Q9HBB8 845 aa9.3□□□□□ -0.92
SKP1-201ENST00000328392 BHMG1C9JSJ3 638 aaPredicted RBP9.27□□□□□ -0.93
SKP1-201ENST00000328392 RNF166Q96A37 237 aaPredicted RBP9.27□□□□□ -0.93
SKP1-201ENST00000328392 TESPA1A2RU30 521 aaPredicted RBP9.26□□□□□ -0.93
SKP1-201ENST00000328392 NPDC1Q9NQX5 325 aaPredicted RBP9.24□□□□□ -0.93
SKP1-201ENST00000328392 KIAA1468Q9P260 1216 aa9.24□□□□□ -0.93
SKP1-201ENST00000328392 STAC3Q96MF2 364 aa9.23□□□□□ -0.93
SKP1-201ENST00000328392 FAM198AQ9UFP1 575 aa9.23□□□□□ -0.93
SKP1-201ENST00000328392 RABGEF1Q9UJ41 708 aa9.23□□□□□ -0.93
SKP1-201ENST00000328392 TSKSQ9UJT2 592 aa9.23□□□□□ -0.93
SKP1-201ENST00000328392 TRIM6-TRIM34B2RNG4 842 aa9.22□□□□□ -0.93
SKP1-201ENST00000328392 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
SKP1-201ENST00000328392 C3orf80F5H4A9 247 aa9.21□□□□□ -0.94
SKP1-201ENST00000328392 PRSS12P56730 875 aa9.21□□□□□ -0.94
SKP1-201ENST00000328392 RBM26Q5T8P6 1007 aaKnown RBP9.21□□□□□ -0.94
SKP1-201ENST00000328392 NUTM2FA1L443 756 aa9.2□□□□□ -0.94
SKP1-201ENST00000328392 MRPL50Q8N5N7 158 aaKnown RBP9.2□□□□□ -0.94
SKP1-201ENST00000328392 KCTD12Q96CX2 325 aaKnown RBP9.2□□□□□ -0.94
SKP1-201ENST00000328392 SEPT9Q9UHD8 586 aaPredicted RBP9.2□□□□□ -0.94
SKP1-201ENST00000328392 NBPF3Q9H094 633 aa9.19□□□□□ -0.94
SKP1-201ENST00000328392 ONECUT3O60422 494 aaPredicted RBP9.18□□□□□ -0.94
SKP1-201ENST00000328392 CERKQ8TCT0 537 aa9.18□□□□□ -0.94
SKP1-201ENST00000328392 SMAPO00193 183 aa9.17□□□□□ -0.94
SKP1-201ENST00000328392 PTGDRQ13258 359 aa9.17□□□□□ -0.94
SKP1-201ENST00000328392 PADI6Q6TGC4 694 aa9.16□□□□□ -0.94
SKP1-201ENST00000328392 PACS2Q86VP3 889 aa9.16□□□□□ -0.94
SKP1-201ENST00000328392 GOLGA8CPA6NN73 597 aa9.15□□□□□ -0.94
SKP1-201ENST00000328392 SMYD5Q6GMV2 418 aa9.15□□□□□ -0.94
SKP1-201ENST00000328392 TTC13Q8NBP0 860 aa9.15□□□□□ -0.94
SKP1-201ENST00000328392 BCANQ96GW7 911 aa9.15□□□□□ -0.94
SKP1-201ENST00000328392 WNT2BQ93097 391 aa9.14□□□□□ -0.95
SKP1-201ENST00000328392 TATDN2Q93075 761 aa9.13□□□□□ -0.95
SKP1-201ENST00000328392 ZFRQ96KR1 1074 aaKnown RBP9.13□□□□□ -0.95
SKP1-201ENST00000328392 NUDT18Q6ZVK8 323 aa9.12□□□□□ -0.95
SKP1-201ENST00000328392 LAPTM4BQ86VI4 370 aa9.12□□□□□ -0.95
SKP1-201ENST00000328392 RBM27Q9P2N5 1060 aaKnown RBP9.12□□□□□ -0.95
SKP1-201ENST00000328392 PNMA3Q9UL41 463 aa9.12□□□□□ -0.95
SKP1-201ENST00000328392 PTPN5P54829 565 aa9.11□□□□□ -0.95
SKP1-201ENST00000328392 FAM98CQ17RN3 349 aaKnown RBP9.11□□□□□ -0.95
SKP1-201ENST00000328392 THSD4Q6ZMP0 1018 aa9.11□□□□□ -0.95
SKP1-201ENST00000328392 GPR37O15354 613 aa9.1□□□□□ -0.95
SKP1-201ENST00000328392 FCHSD2O94868 740 aa9.1□□□□□ -0.95
SKP1-201ENST00000328392 BCAMP50895 628 aa9.1□□□□□ -0.95
SKP1-201ENST00000328392 FAM161AQ3B820 660 aa9.1□□□□□ -0.95
SKP1-201ENST00000328392 NBPF26B4DH59 902 aa9.09□□□□□ -0.95
SKP1-201ENST00000328392 FECHP22830 423 aa9.09□□□□□ -0.95
SKP1-201ENST00000328392 ANKK1Q8NFD2 765 aa9.09□□□□□ -0.95
SKP1-201ENST00000328392 HCSTQ9UBK5 93 aa9.09□□□□□ -0.95
SKP1-201ENST00000328392 EYA1Q99502 592 aa9.06□□□□□ -0.96
SKP1-201ENST00000328392 SOWAHBA6NEL2 793 aa9.05□□□□□ -0.96
SKP1-201ENST00000328392 HIC1Q14526 733 aa9.05□□□□□ -0.96
SKP1-201ENST00000328392 SAMD7Q7Z3H4 446 aa9.05□□□□□ -0.96
SKP1-201ENST00000328392 GPIHBP1Q8IV16 184 aa9.05□□□□□ -0.96
SKP1-201ENST00000328392 ADGRG1Q9Y653 693 aa9.05□□□□□ -0.96
SKP1-201ENST00000328392 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.04□□□□□ -0.96
SKP1-201ENST00000328392 GNPATO15228 680 aa9.03□□□□□ -0.96
SKP1-201ENST00000328392 LRCH3Q96II8 777 aa9.03□□□□□ -0.96
SKP1-201ENST00000328392 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.03□□□□□ -0.96
SKP1-201ENST00000328392 PRKCSHP14314 528 aaPredicted RBP9.02□□□□□ -0.97
SKP1-201ENST00000328392 WBP1LQ9NX94 342 aa9.02□□□□□ -0.97
SKP1-201ENST00000328392 TULP1O00294 542 aaPredicted RBP9.01□□□□□ -0.97
SKP1-201ENST00000328392 SWT1Q5T5J6 900 aaKnown RBP9.01□□□□□ -0.97
SKP1-201ENST00000328392 HPS5Q9UPZ3 1129 aa9.01□□□□□ -0.97
SKP1-201ENST00000328392 LMOD2Q6P5Q4 547 aa9□□□□□ -0.97
SKP1-201ENST00000328392 RBM46Q8TBY0 533 aaKnown RBP8.99□□□□□ -0.97
SKP1-201ENST00000328392 RCCD1A6NED2 376 aa8.98□□□□□ -0.97
SKP1-201ENST00000328392 TSR3Q9UJK0 312 aaKnown RBP8.98□□□□□ -0.97
SKP1-201ENST00000328392 RNF40O75150 1001 aa8.97□□□□□ -0.97
SKP1-201ENST00000328392 PXYLP1Q8TE99 480 aa8.97□□□□□ -0.97
SKP1-201ENST00000328392 METTL3Q86U44 580 aaKnown RBP8.96□□□□□ -0.98
SKP1-201ENST00000328392 NLRP7Q8WX94 980 aa8.96□□□□□ -0.98
SKP1-201ENST00000328392 PLA2G2EQ9NZK7 142 aa8.96□□□□□ -0.98
SKP1-201ENST00000328392 OATP04181 439 aa8.95□□□□□ -0.98
SKP1-201ENST00000328392 DNAJB2P25686 324 aa8.95□□□□□ -0.98
SKP1-201ENST00000328392 HDGFP51858 240 aaKnown RBP8.95□□□□□ -0.98
SKP1-201ENST00000328392 PPP4CP60510 307 aa8.95□□□□□ -0.98
SKP1-201ENST00000328392 TPRNQ4KMQ1 711 aa8.95□□□□□ -0.98
SKP1-201ENST00000328392 PHOX2BQ99453 314 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms