RNA–Protein interactions for RNA: ENST00000324856.11

ARID1A-201, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARID1A, Length 8,577 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-201ENST00000324856 CFDP1Q9UEE9 299 aaPredicted RBP22.57■■□□□ 1.2
ARID1A-201ENST00000324856 CREBRFQ8IUR6 639 aa22.57■■□□□ 1.2
ARID1A-201ENST00000324856 PES1O00541 588 aaKnown RBP22.56■■□□□ 1.2
ARID1A-201ENST00000324856 CCDC39Q9UFE4 941 aa22.56■■□□□ 1.2
ARID1A-201ENST00000324856 ARHGAP35Q9NRY4 1499 aa22.55■■□□□ 1.2
ARID1A-201ENST00000324856 SPAG9O60271 1321 aaKnown RBP22.55■■□□□ 1.2
ARID1A-201ENST00000324856 KANK1Q14678 1352 aa22.55■■□□□ 1.2
ARID1A-201ENST00000324856 PLEKHD1A6NEE1 506 aa22.55■■□□□ 1.2
ARID1A-201ENST00000324856 LEKR1Q6ZMV7 388 aa22.55■■□□□ 1.2
ARID1A-201ENST00000324856 KIF27Q86VH2 1401 aa22.54■■□□□ 1.2
ARID1A-201ENST00000324856 PDE4AP27815 886 aa22.54■■□□□ 1.2
ARID1A-201ENST00000324856 REC8O95072 547 aa22.54■■□□□ 1.2
ARID1A-201ENST00000324856 USP8P40818 1118 aa22.53■■□□□ 1.2
ARID1A-201ENST00000324856 ISY1Q9ULR0 285 aaKnown RBP22.53■■□□□ 1.2
ARID1A-201ENST00000324856 MRE11P49959 708 aa22.53■■□□□ 1.2
ARID1A-201ENST00000324856 CENPJQ9HC77 1338 aaPredicted RBP22.53■■□□□ 1.2
ARID1A-201ENST00000324856 NASPP49321 788 aaPredicted RBP22.52■■□□□ 1.2
ARID1A-201ENST00000324856 MNS1Q8NEH6 495 aa22.52■■□□□ 1.2
ARID1A-201ENST00000324856 SMC4Q9NTJ3 1288 aa22.52■■□□□ 1.2
ARID1A-201ENST00000324856 MYO6Q9UM54 1294 aa22.52■■□□□ 1.2
ARID1A-201ENST00000324856 APBB1O00213 710 aa22.52■■□□□ 1.19
ARID1A-201ENST00000324856 NAT10Q9H0A0 1025 aaKnown RBP22.51■■□□□ 1.19
ARID1A-201ENST00000324856 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
ARID1A-201ENST00000324856 ZBED9Q6R2W3 1325 aa22.5■■□□□ 1.19
ARID1A-201ENST00000324856 PLPPR3Q6T4P5 718 aa22.5■■□□□ 1.19
ARID1A-201ENST00000324856 NUCB2P80303 420 aa22.49■■□□□ 1.19
ARID1A-201ENST00000324856 CCP110O43303 1012 aa22.49■■□□□ 1.19
ARID1A-201ENST00000324856 IFT57Q9NWB7 429 aa22.49■■□□□ 1.19
ARID1A-201ENST00000324856 DHX8Q14562 1220 aaKnown RBP22.48■■□□□ 1.19
ARID1A-201ENST00000324856 FAM184AQ8NB25 1140 aa22.48■■□□□ 1.19
ARID1A-201ENST00000324856 CHMP5Q9NZZ3 219 aa22.48■■□□□ 1.19
ARID1A-201ENST00000324856 STK31Q9BXU1 1019 aa22.48■■□□□ 1.19
ARID1A-201ENST00000324856 SIN3AQ96ST3 1273 aa22.47■■□□□ 1.19
ARID1A-201ENST00000324856 DCAF11Q8TEB1 546 aa22.47■■□□□ 1.19
ARID1A-201ENST00000324856 LRRFIP1Q32MZ4 808 aaKnown RBP22.46■■□□□ 1.19
ARID1A-201ENST00000324856 NLRP13Q86W25 1043 aa22.45■■□□□ 1.18
ARID1A-201ENST00000324856 GOLGA6L7A0A1B0GV03 622 aa22.45■■□□□ 1.18
ARID1A-201ENST00000324856 GORABQ5T7V8 394 aa22.45■■□□□ 1.18
ARID1A-201ENST00000324856 INCENPQ9NQS7 918 aa22.45■■□□□ 1.18
ARID1A-201ENST00000324856 DEF6Q9H4E7 631 aa22.44■■□□□ 1.18
ARID1A-201ENST00000324856 CAGE1Q8TC20 777 aa22.44■■□□□ 1.18
ARID1A-201ENST00000324856 CGNL1Q0VF96 1302 aa22.44■■□□□ 1.18
ARID1A-201ENST00000324856 LMOD3Q0VAK6 560 aa22.43■■□□□ 1.18
ARID1A-201ENST00000324856 CCDC173Q0VFZ6 552 aa22.42■■□□□ 1.18
ARID1A-201ENST00000324856 TSPYL1Q9H0U9 437 aa22.42■■□□□ 1.18
ARID1A-201ENST00000324856 LETM1O95202 739 aaPredicted RBP22.42■■□□□ 1.18
ARID1A-201ENST00000324856 KIF15Q9NS87 1388 aa22.42■■□□□ 1.18
ARID1A-201ENST00000324856 SASS6Q6UVJ0 657 aa22.41■■□□□ 1.18
ARID1A-201ENST00000324856 STK11IPQ8N1F8 1099 aa22.41■■□□□ 1.18
ARID1A-201ENST00000324856 FOXD4L1Q9NU39 408 aa22.4■■□□□ 1.18
ARID1A-201ENST00000324856 PDE4CQ08493 712 aa22.39■■□□□ 1.17
ARID1A-201ENST00000324856 CHMP7Q8WUX9 453 aaPredicted RBP22.39■■□□□ 1.17
ARID1A-201ENST00000324856 CAVIN1Q6NZI2 390 aaKnown RBP22.39■■□□□ 1.17
ARID1A-201ENST00000324856 CPLX2Q6PUV4 134 aaKnown RBP22.39■■□□□ 1.17
ARID1A-201ENST00000324856 NEXNQ0ZGT2 675 aa22.38■■□□□ 1.17
ARID1A-201ENST00000324856 ZRSR2Q15696 482 aaKnown RBP22.38■■□□□ 1.17
ARID1A-201ENST00000324856 AAMPQ13685 434 aa22.38■■□□□ 1.17
ARID1A-201ENST00000324856 U2AF1L5P0DN76 240 aaPredicted RBP22.38■■□□□ 1.17
ARID1A-201ENST00000324856 U2AF1Q01081 240 aaKnown RBP eCLIP22.38■■□□□ 1.173e-7■■■□□ 17
ARID1A-201ENST00000324856 TAF7LQ5H9L4 462 aa22.37■■□□□ 1.17
ARID1A-201ENST00000324856 WRNQ14191 1432 aaPredicted RBP eCLIP22.37■■□□□ 1.17
ARID1A-201ENST00000324856 KIAA0754O94854 1291 aa22.37■■□□□ 1.17
ARID1A-201ENST00000324856 CCDC47Q96A33 483 aaKnown RBP22.37■■□□□ 1.17
ARID1A-201ENST00000324856 SRPK2P78362 688 aaKnown RBP22.37■■□□□ 1.17
ARID1A-201ENST00000324856 HSPA5P11021 654 aaKnown RBP22.37■■□□□ 1.17
ARID1A-201ENST00000324856 DYDC1Q8WWB3 177 aa22.36■■□□□ 1.17
ARID1A-201ENST00000324856 AKAP17AQ02040 695 aaKnown RBP22.36■■□□□ 1.17
ARID1A-201ENST00000324856 RUFY2Q8WXA3 655 aa22.35■■□□□ 1.17
ARID1A-201ENST00000324856 HDGFP51858 240 aaKnown RBP22.35■■□□□ 1.17
ARID1A-201ENST00000324856 ROCK1Q13464 1354 aa22.35■■□□□ 1.17
ARID1A-201ENST00000324856 HDGFL2Q7Z4V5 671 aaPredicted RBP22.35■■□□□ 1.17
ARID1A-201ENST00000324856 PLEKHG5O94827 1062 aa22.34■■□□□ 1.17
ARID1A-201ENST00000324856 ZKSCAN1P17029 563 aaPredicted RBP22.34■■□□□ 1.17
ARID1A-201ENST00000324856 R3HCC1Q9Y3T6 440 aaKnown RBP22.34■■□□□ 1.17
ARID1A-201ENST00000324856 NOL8Q76FK4 1167 aaKnown RBP22.33■■□□□ 1.17
ARID1A-201ENST00000324856 BAZ1AQ9NRL2 1556 aaPredicted RBP22.32■■□□□ 1.16
ARID1A-201ENST00000324856 VPS8Q8N3P4 1428 aa22.32■■□□□ 1.16
ARID1A-201ENST00000324856 FOXD4L5Q5VV16 416 aaPredicted RBP22.32■■□□□ 1.16
ARID1A-201ENST00000324856 FOXD4L4Q8WXT5 416 aaPredicted RBP22.32■■□□□ 1.16
ARID1A-201ENST00000324856 NGEFQ8N5V2 710 aa22.31■■□□□ 1.16
ARID1A-201ENST00000324856 MBD3O95983 291 aa22.31■■□□□ 1.16
ARID1A-201ENST00000324856 PCMTD1Q96MG8 357 aaPredicted RBP22.31■■□□□ 1.16
ARID1A-201ENST00000324856 GOLGA6L10A6NI86 522 aa22.31■■□□□ 1.16
ARID1A-201ENST00000324856 RRP1P56182 461 aaKnown RBP22.31■■□□□ 1.16
ARID1A-201ENST00000324856 NFKBIBQ15653 356 aa22.31■■□□□ 1.16
ARID1A-201ENST00000324856 PRKCSHP14314 528 aaPredicted RBP22.3■■□□□ 1.16
ARID1A-201ENST00000324856 TRIM29Q14134 588 aa22.3■■□□□ 1.16
ARID1A-201ENST00000324856 HSP90AB3PQ58FF7 597 aa22.3■■□□□ 1.16
ARID1A-201ENST00000324856 EIF3JO75822 258 aaKnown RBP22.3■■□□□ 1.16
ARID1A-201ENST00000324856 MCTP1Q6DN14 999 aa22.3■■□□□ 1.16
ARID1A-201ENST00000324856 KIF7Q2M1P5 1343 aa22.3■■□□□ 1.16
ARID1A-201ENST00000324856 MARCH6O60337 910 aa22.29■■□□□ 1.16
ARID1A-201ENST00000324856 BICD2Q8TD16 824 aa22.29■■□□□ 1.16
ARID1A-201ENST00000324856 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.29■■□□□ 1.165e-8■■■□□ 17.8
ARID1A-201ENST00000324856 RNF20Q5VTR2 975 aa22.29■■□□□ 1.16
ARID1A-201ENST00000324856 MYBBP1AQ9BQG0 1328 aaKnown RBP22.26■■□□□ 1.15
ARID1A-201ENST00000324856 E9PSI1 815 aa22.26■■□□□ 1.15
ARID1A-201ENST00000324856 PDCL2Q8N4E4 241 aa22.26■■□□□ 1.15
ARID1A-201ENST00000324856 SYNE3Q6ZMZ3 975 aa22.26■■□□□ 1.15
ARID1A-201ENST00000324856 CCDC73Q6ZRK6 1079 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms