RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 NBPF8Q3BBV2 869 aa37.6■■■■□ 3.61
TM6SF1-202ENST00000322019 GLI2P10070 1586 aa37.59■■■■□ 3.61
TM6SF1-202ENST00000322019 KDM5CP41229 1560 aa37.59■■■■□ 3.61
TM6SF1-202ENST00000322019 KIF3BO15066 747 aa37.58■■■■□ 3.61
TM6SF1-202ENST00000322019 DHX29Q7Z478 1369 aaKnown RBP37.57■■■■□ 3.6
TM6SF1-202ENST00000322019 PLA2R1Q13018 1463 aa37.55■■■■□ 3.6
TM6SF1-202ENST00000322019 MIER1Q8N108 512 aa37.54■■■■□ 3.6
TM6SF1-202ENST00000322019 DEPDC5O75140 1603 aa37.51■■■■□ 3.6
TM6SF1-202ENST00000322019 HECW2Q9P2P5 1572 aa37.51■■■■□ 3.59
TM6SF1-202ENST00000322019 MLH3Q9UHC1 1453 aa37.49■■■■□ 3.59
TM6SF1-202ENST00000322019 TSPOAP1O95153 1857 aa37.48■■■■□ 3.59
TM6SF1-202ENST00000322019 ZNF326Q5BKZ1 582 aaKnown RBP37.48■■■■□ 3.59
TM6SF1-202ENST00000322019 CCDC144AA2RUR9 1427 aa37.47■■■■□ 3.59
TM6SF1-202ENST00000322019 A2MP01023 1474 aa37.47■■■■□ 3.59
TM6SF1-202ENST00000322019 EIF2AK4Q9P2K8 1649 aaKnown RBP37.44■■■■□ 3.58
TM6SF1-202ENST00000322019 ABCA6Q8N139 1617 aa37.44■■■■□ 3.58
TM6SF1-202ENST00000322019 MROH1Q8NDA8 1641 aa37.43■■■■□ 3.58
TM6SF1-202ENST00000322019 FRMPD1Q5SYB0 1578 aa37.43■■■■□ 3.58
TM6SF1-202ENST00000322019 E9PCH4 1651 aa37.41■■■■□ 3.58
TM6SF1-202ENST00000322019 RICTORQ6R327 1708 aa37.41■■■■□ 3.58
TM6SF1-202ENST00000322019 HSPA5P11021 654 aaKnown RBP37.4■■■■□ 3.58
TM6SF1-202ENST00000322019 PRDM15P57071 1507 aaPredicted RBP37.38■■■■□ 3.58
TM6SF1-202ENST00000322019 KDM2AQ9Y2K7 1162 aa37.38■■■■□ 3.58
TM6SF1-202ENST00000322019 KANK1Q14678 1352 aa37.38■■■■□ 3.57
TM6SF1-202ENST00000322019 VWDEQ8N2E2 1590 aa37.38■■■■□ 3.57
TM6SF1-202ENST00000322019 PPRC1Q5VV67 1664 aaKnown RBP37.38■■■■□ 3.57
TM6SF1-202ENST00000322019 RGL3Q3MIN7 710 aa37.36■■■■□ 3.57
TM6SF1-202ENST00000322019 DDX10Q13206 875 aaKnown RBP37.35■■■■□ 3.57
TM6SF1-202ENST00000322019 DCAF11Q8TEB1 546 aa37.35■■■■□ 3.57
TM6SF1-202ENST00000322019 TET3O43151 1660 aa37.32■■■■□ 3.56
TM6SF1-202ENST00000322019 ATP10AO60312 1499 aa37.32■■■■□ 3.56
TM6SF1-202ENST00000322019 EIF4G2P78344 907 aaKnown RBP eCLIP37.32■■■■□ 3.56
TM6SF1-202ENST00000322019 YEATS2Q9ULM3 1422 aa37.31■■■■□ 3.56
TM6SF1-202ENST00000322019 DIP2CQ9Y2E4 1556 aa37.3■■■■□ 3.56
TM6SF1-202ENST00000322019 GGT6Q6P531 493 aa37.29■■■■□ 3.56
TM6SF1-202ENST00000322019 KIF13AQ9H1H9 1805 aa37.27■■■■□ 3.56
TM6SF1-202ENST00000322019 RNF17Q9BXT8 1623 aaKnown RBP37.26■■■■□ 3.55
TM6SF1-202ENST00000322019 UHRF1BP1Q6BDS2 1440 aa37.24■■■■□ 3.55
TM6SF1-202ENST00000322019 CEP152O94986 1710 aa37.22■■■■□ 3.55
TM6SF1-202ENST00000322019 SPHKAPQ2M3C7 1700 aa37.21■■■■□ 3.55
TM6SF1-202ENST00000322019 TRPM2O94759 1503 aa37.2■■■■□ 3.55
TM6SF1-202ENST00000322019 PTPRTO14522 1441 aa37.2■■■■□ 3.55
TM6SF1-202ENST00000322019 EFCAB6Q5THR3 1501 aa37.18■■■■□ 3.54
TM6SF1-202ENST00000322019 CLTCL1P53675 1640 aa37.15■■■■□ 3.54
TM6SF1-202ENST00000322019 SPATA31E1Q6ZUB1 1445 aa37.15■■■■□ 3.54
TM6SF1-202ENST00000322019 RALGAPBQ86X10 1494 aa37.14■■■■□ 3.54
TM6SF1-202ENST00000322019 WASHC2AQ641Q2 1341 aa37.13■■■■□ 3.53
TM6SF1-202ENST00000322019 BCORL1Q5H9F3 1711 aa37.13■■■■□ 3.53
TM6SF1-202ENST00000322019 ZMYM4Q5VZL5 1548 aa37.12■■■■□ 3.53
TM6SF1-202ENST00000322019 C11orf95C9JLR9 678 aaPredicted RBP37.12■■■■□ 3.53
TM6SF1-202ENST00000322019 UGGT1Q9NYU2 1555 aa37.12■■■■□ 3.53
TM6SF1-202ENST00000322019 LMTK2Q8IWU2 1503 aa37.12■■■■□ 3.53
TM6SF1-202ENST00000322019 PRAG1Q86YV5 1406 aa37.1■■■■□ 3.53
TM6SF1-202ENST00000322019 WASHC2CQ9Y4E1 1318 aa37.1■■■■□ 3.53
TM6SF1-202ENST00000322019 COL17A1Q9UMD9 1497 aaPredicted RBP37.09■■■■□ 3.53
TM6SF1-202ENST00000322019 USP47Q96K76 1375 aa37.09■■■■□ 3.53
TM6SF1-202ENST00000322019 CARD11Q9BXL7 1154 aa37.06■■■■□ 3.52
TM6SF1-202ENST00000322019 ABCC3O15438 1527 aa37.06■■■■□ 3.52
TM6SF1-202ENST00000322019 NPATQ14207 1427 aa37.05■■■■□ 3.52
TM6SF1-202ENST00000322019 YTHDC1Q96MU7 727 aaKnown RBP37.03■■■■□ 3.52
TM6SF1-202ENST00000322019 CFAP65Q6ZU64 1925 aaKnown RBP37.02■■■■□ 3.52
TM6SF1-202ENST00000322019 ROCK2O75116 1388 aaKnown RBP37.01■■■■□ 3.52
TM6SF1-202ENST00000322019 NBPF1Q3BBV0 1214 aa37■■■■□ 3.51
TM6SF1-202ENST00000322019 TRPM1Q7Z4N2 1603 aa36.99■■■■□ 3.51
TM6SF1-202ENST00000322019 CCDC7Q96M83 1385 aa36.95■■■■□ 3.51
TM6SF1-202ENST00000322019 CAMSAP1Q5T5Y3 1602 aa36.95■■■■□ 3.51
TM6SF1-202ENST00000322019 KIF7Q2M1P5 1343 aa36.91■■■■□ 3.5
TM6SF1-202ENST00000322019 SIGLEC1Q9BZZ2 1709 aa36.88■■■■□ 3.49
TM6SF1-202ENST00000322019 ST20-MTHFSA0A0A6YYL1 179 aa36.87■■■■□ 3.49
TM6SF1-202ENST00000322019 MROH2AA6NES4 1674 aa36.85■■■■□ 3.49
TM6SF1-202ENST00000322019 MADDQ8WXG6 1647 aa36.84■■■■□ 3.49
TM6SF1-202ENST00000322019 CHGAP10645 457 aaKnown RBP36.84■■■■□ 3.49
TM6SF1-202ENST00000322019 KIF1BO60333 1816 aa36.83■■■■□ 3.49
TM6SF1-202ENST00000322019 POLR3GLQ9BT43 218 aa36.81■■■■□ 3.48
TM6SF1-202ENST00000322019 CNTLNQ9NXG0 1405 aa36.81■■■■□ 3.48
TM6SF1-202ENST00000322019 GPRASP1Q5JY77 1395 aa36.81■■■■□ 3.48
TM6SF1-202ENST00000322019 ZC3H13Q5T200 1668 aaKnown RBP36.81■■■■□ 3.48
TM6SF1-202ENST00000322019 POLR1AO95602 1720 aaPredicted RBP36.79■■■■□ 3.48
TM6SF1-202ENST00000322019 ARHGEF40Q8TER5 1519 aa36.79■■■■□ 3.48
TM6SF1-202ENST00000322019 ANP32CO43423 234 aa36.79■■■■□ 3.48
TM6SF1-202ENST00000322019 MLECQ14165 292 aa36.79■■■■□ 3.48
TM6SF1-202ENST00000322019 REREQ9P2R6 1566 aa36.78■■■■□ 3.48
TM6SF1-202ENST00000322019 NOS1P29475 1434 aa36.78■■■■□ 3.48
TM6SF1-202ENST00000322019 SYNMO15061 1565 aa36.76■■■■□ 3.48
TM6SF1-202ENST00000322019 NEURL4Q96JN8 1562 aa36.76■■■■□ 3.48
TM6SF1-202ENST00000322019 ADGRB3O60242 1522 aa36.75■■■■□ 3.47
TM6SF1-202ENST00000322019 ARHGAP31Q2M1Z3 1444 aa36.74■■■■□ 3.47
TM6SF1-202ENST00000322019 SCAF1Q9H7N4 1312 aaKnown RBP36.74■■■■□ 3.47
TM6SF1-202ENST00000322019 AGLP35573 1532 aa36.74■■■■□ 3.47
TM6SF1-202ENST00000322019 TRHP20396 242 aaPredicted RBP36.73■■■■□ 3.47
TM6SF1-202ENST00000322019 ADGRF5Q8IZF2 1346 aa36.72■■■■□ 3.47
TM6SF1-202ENST00000322019 LAMC1P11047 1609 aa36.69■■■■□ 3.46
TM6SF1-202ENST00000322019 FBXO31Q5XUX0 539 aaPredicted RBP36.68■■■■□ 3.46
TM6SF1-202ENST00000322019 IFT172Q9UG01 1749 aa36.67■■■■□ 3.46
TM6SF1-202ENST00000322019 STAC3Q96MF2 364 aa36.66■■■■□ 3.46
TM6SF1-202ENST00000322019 PIK3C2BO00750 1634 aa36.65■■■■□ 3.46
TM6SF1-202ENST00000322019 MYOM2P54296 1465 aa36.64■■■■□ 3.46
TM6SF1-202ENST00000322019 IDI1Q13907 227 aa36.63■■■■□ 3.46
TM6SF1-202ENST00000322019 CLTCQ00610 1675 aaKnown RBP36.63■■■■□ 3.45
TM6SF1-202ENST00000322019 PREX1Q8TCU6 1659 aa36.63■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms