RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 GZF1Q9H116 711 aaPredicted RBP21.5■■□□□ 1.03
PDE1C-201ENST00000321453 THOC2Q8NI27 1593 aaKnown RBP21.5■■□□□ 1.03
PDE1C-201ENST00000321453 SEC24BO95487 1268 aa21.5■■□□□ 1.03
PDE1C-201ENST00000321453 SPRYD3Q8NCJ5 442 aa21.49■■□□□ 1.03
PDE1C-201ENST00000321453 EPRSP07814 1512 aaKnown RBP21.49■■□□□ 1.03
PDE1C-201ENST00000321453 GLIPR1L2Q4G1C9 344 aa21.47■■□□□ 1.03
PDE1C-201ENST00000321453 PANK2Q9BZ23 570 aa21.46■■□□□ 1.03
PDE1C-201ENST00000321453 PARD3Q8TEW0 1356 aa21.46■■□□□ 1.03
PDE1C-201ENST00000321453 KIAA1107Q9UPP5 1409 aa21.46■■□□□ 1.03
PDE1C-201ENST00000321453 ROCK1Q13464 1354 aa21.46■■□□□ 1.03
PDE1C-201ENST00000321453 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
PDE1C-201ENST00000321453 NESP48681 1621 aa21.45■■□□□ 1.02
PDE1C-201ENST00000321453 ADAMTS8Q9UP79 889 aa21.45■■□□□ 1.02
PDE1C-201ENST00000321453 PNNQ9H307 717 aaKnown RBP21.44■■□□□ 1.02
PDE1C-201ENST00000321453 RALGAPBQ86X10 1494 aa21.43■■□□□ 1.02
PDE1C-201ENST00000321453 USP19O94966 1318 aa21.42■■□□□ 1.02
PDE1C-201ENST00000321453 HSP90AA2PQ14568 343 aaPredicted RBP21.42■■□□□ 1.02
PDE1C-201ENST00000321453 L1TD1Q5T7N2 865 aaKnown RBP21.42■■□□□ 1.02
PDE1C-201ENST00000321453 DNMBPQ6XZF7 1577 aa21.41■■□□□ 1.02
PDE1C-201ENST00000321453 XRCC6P12956 609 aaKnown RBP eCLIP21.4■■□□□ 1.02
PDE1C-201ENST00000321453 PER1O15534 1290 aaPredicted RBP21.39■■□□□ 1.02
PDE1C-201ENST00000321453 DUSP27Q5VZP5 1158 aa21.39■■□□□ 1.02
PDE1C-201ENST00000321453 DNMT1P26358 1616 aaKnown RBP21.39■■□□□ 1.01
PDE1C-201ENST00000321453 PLEKHH1Q9ULM0 1364 aa21.39■■□□□ 1.01
PDE1C-201ENST00000321453 IGHDP01880 384 aa21.38■■□□□ 1.01
PDE1C-201ENST00000321453 PANK3Q9H999 370 aa21.38■■□□□ 1.01
PDE1C-201ENST00000321453 HSP90AA1P07900 732 aaKnown RBP21.38■■□□□ 1.01
PDE1C-201ENST00000321453 BLMP54132 1417 aaPredicted RBP21.37■■□□□ 1.01
PDE1C-201ENST00000321453 NBPF1Q3BBV0 1214 aa21.37■■□□□ 1.01
PDE1C-201ENST00000321453 RGL3Q3MIN7 710 aa21.37■■□□□ 1.01
PDE1C-201ENST00000321453 BCAR3O75815 825 aa21.36■■□□□ 1.01
PDE1C-201ENST00000321453 BECN1Q14457 450 aa21.36■■□□□ 1.01
PDE1C-201ENST00000321453 GOLGA6L3A6NEY3 463 aa21.35■■□□□ 1.01
PDE1C-201ENST00000321453 E9PCH4 1651 aa21.35■■□□□ 1.01
PDE1C-201ENST00000321453 CCDC146Q8IYE0 955 aa21.35■■□□□ 1.01
PDE1C-201ENST00000321453 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.34■■□□□ 1.01
PDE1C-201ENST00000321453 ZMYM4Q5VZL5 1548 aa21.34■■□□□ 1.01
PDE1C-201ENST00000321453 NUP155O75694 1391 aa21.33■■□□□ 1.01
PDE1C-201ENST00000321453 CFDP1Q9UEE9 299 aaPredicted RBP21.33■■□□□ 1.01
PDE1C-201ENST00000321453 KIAA0586Q9BVV6 1533 aa21.33■■□□□ 1.01
PDE1C-201ENST00000321453 WDR43Q15061 677 aaKnown RBP eCLIP21.32■■□□□ 1
PDE1C-201ENST00000321453 UHRF1BP1Q6BDS2 1440 aa21.32■■□□□ 1
PDE1C-201ENST00000321453 GOLGA2Q08379 1002 aa21.31■■□□□ 1
PDE1C-201ENST00000321453 GAPVD1Q14C86 1478 aa21.31■■□□□ 1
PDE1C-201ENST00000321453 SPINK5Q9NQ38 1064 aaPredicted RBP21.3■■□□□ 1
PDE1C-201ENST00000321453 DISP3Q9P2K9 1392 aa21.3■■□□□ 1
PDE1C-201ENST00000321453 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
PDE1C-201ENST00000321453 ANTXR1Q9H6X2 564 aa21.28■■□□□ 1
PDE1C-201ENST00000321453 CLCN1P35523 988 aa21.27■■□□□ 1
PDE1C-201ENST00000321453 TBC1D2Q9BYX2 928 aa21.26■□□□□ 0.99
PDE1C-201ENST00000321453 COG6Q9Y2V7 657 aa21.25■□□□□ 0.99
PDE1C-201ENST00000321453 WDR62O43379 1518 aa21.25■□□□□ 0.99
PDE1C-201ENST00000321453 ZNF608Q9ULD9 1512 aaPredicted RBP21.25■□□□□ 0.99
PDE1C-201ENST00000321453 PANK1Q8TE04 598 aa21.25■□□□□ 0.99
PDE1C-201ENST00000321453 KIF21AQ7Z4S6 1674 aa21.24■□□□□ 0.99
PDE1C-201ENST00000321453 CAMSAP2Q08AD1 1489 aa21.24■□□□□ 0.99
PDE1C-201ENST00000321453 CANXP27824 592 aaKnown RBP21.24■□□□□ 0.99
PDE1C-201ENST00000321453 RRP9O43818 475 aaKnown RBP21.23■□□□□ 0.99
PDE1C-201ENST00000321453 ANKRD50Q9ULJ7 1429 aa21.23■□□□□ 0.99
PDE1C-201ENST00000321453 PLEKHH2Q8IVE3 1493 aa21.22■□□□□ 0.99
PDE1C-201ENST00000321453 SLFN5Q08AF3 891 aa21.22■□□□□ 0.99
PDE1C-201ENST00000321453 ERBB4Q15303 1308 aa21.21■□□□□ 0.99
PDE1C-201ENST00000321453 MCM4P33991 863 aa21.21■□□□□ 0.99
PDE1C-201ENST00000321453 FSD2A1L4K1 749 aa21.2■□□□□ 0.98
PDE1C-201ENST00000321453 PRG4Q92954 1404 aaPredicted RBP21.2■□□□□ 0.98
PDE1C-201ENST00000321453 PPP2R1AP30153 589 aa21.19■□□□□ 0.98
PDE1C-201ENST00000321453 DMRT2Q9Y5R5 561 aa21.19■□□□□ 0.98
PDE1C-201ENST00000321453 APAF1O14727 1248 aa21.19■□□□□ 0.98
PDE1C-201ENST00000321453 UPF2Q9HAU5 1272 aaKnown RBP21.19■□□□□ 0.98
PDE1C-201ENST00000321453 ANKRD30AQ9BXX3 1397 aa21.19■□□□□ 0.98
PDE1C-201ENST00000321453 TRAK2O60296 914 aa21.19■□□□□ 0.98
PDE1C-201ENST00000321453 NLRP1Q9C000 1473 aa21.18■□□□□ 0.98
PDE1C-201ENST00000321453 ZNF521Q96K83 1311 aa21.17■□□□□ 0.98
PDE1C-201ENST00000321453 URB2Q14146 1524 aaKnown RBP21.17■□□□□ 0.98
PDE1C-201ENST00000321453 TESK2Q96S53 571 aa21.17■□□□□ 0.98
PDE1C-201ENST00000321453 EIF3AQ14152 1382 aaKnown RBP21.17■□□□□ 0.98
PDE1C-201ENST00000321453 ARHGEF12Q9NZN5 1544 aa21.16■□□□□ 0.98
PDE1C-201ENST00000321453 CLUAP1Q96AJ1 413 aa21.15■□□□□ 0.98
PDE1C-201ENST00000321453 VIRMAQ69YN4 1812 aaKnown RBP21.15■□□□□ 0.98
PDE1C-201ENST00000321453 MYH16Q9H6N6 1097 aa21.15■□□□□ 0.98
PDE1C-201ENST00000321453 ESPNB1AK53 854 aa21.15■□□□□ 0.98
PDE1C-201ENST00000321453 MAPK8IP3Q9UPT6 1336 aa21.14■□□□□ 0.97
PDE1C-201ENST00000321453 TBC1D32Q96NH3 1257 aa21.14■□□□□ 0.97
PDE1C-201ENST00000321453 TNNQ9UQP3 1299 aa21.14■□□□□ 0.97
PDE1C-201ENST00000321453 KNSTRNQ9Y448 316 aa21.14■□□□□ 0.97
PDE1C-201ENST00000321453 IQGAP2Q13576 1575 aa21.13■□□□□ 0.97
PDE1C-201ENST00000321453 COL17A1Q9UMD9 1497 aaPredicted RBP21.13■□□□□ 0.97
PDE1C-201ENST00000321453 GRPEL1Q9HAV7 217 aa21.13■□□□□ 0.97
PDE1C-201ENST00000321453 TMF1P82094 1093 aa21.12■□□□□ 0.97
PDE1C-201ENST00000321453 ADGBQ8N7X0 1667 aa21.12■□□□□ 0.97
PDE1C-201ENST00000321453 ERBINQ96RT1 1412 aa21.11■□□□□ 0.97
PDE1C-201ENST00000321453 BCL2L13Q9BXK5 485 aa21.11■□□□□ 0.97
PDE1C-201ENST00000321453 PRAG1Q86YV5 1406 aa21.11■□□□□ 0.97
PDE1C-201ENST00000321453 MRE11P49959 708 aa21.11■□□□□ 0.97
PDE1C-201ENST00000321453 MFAP1P55081 439 aaKnown RBP21.11■□□□□ 0.97
PDE1C-201ENST00000321453 TRIM44Q96DX7 344 aaPredicted RBP21.1■□□□□ 0.97
PDE1C-201ENST00000321453 NUP153P49790 1475 aaKnown RBP21.1■□□□□ 0.97
PDE1C-201ENST00000321453 NEUROD2Q15784 382 aa21.09■□□□□ 0.97
PDE1C-201ENST00000321453 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.09■□□□□ 0.97
PDE1C-201ENST00000321453 NKTRP30414 1462 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms