RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 NUP155O75694 1391 aa22.78■■□□□ 1.24
PDLIM5-202ENST00000318007 FOXD1Q16676 465 aa22.76■■□□□ 1.23
PDLIM5-202ENST00000318007 SLC4A1APQ9BWU0 796 aaKnown RBP22.73■■□□□ 1.23
PDLIM5-202ENST00000318007 DHX57Q6P158 1386 aaKnown RBP22.73■■□□□ 1.23
PDLIM5-202ENST00000318007 EIF2AK4Q9P2K8 1649 aaKnown RBP22.71■■□□□ 1.23
PDLIM5-202ENST00000318007 MPHOSPH9Q99550 1183 aa22.7■■□□□ 1.22
PDLIM5-202ENST00000318007 UNC13BO14795 1591 aa22.7■■□□□ 1.22
PDLIM5-202ENST00000318007 HRCP23327 699 aa22.69■■□□□ 1.22
PDLIM5-202ENST00000318007 PZPP20742 1482 aa22.68■■□□□ 1.22
PDLIM5-202ENST00000318007 MROH1Q8NDA8 1641 aa22.68■■□□□ 1.22
PDLIM5-202ENST00000318007 FAM135AQ9P2D6 1515 aa22.67■■□□□ 1.22
PDLIM5-202ENST00000318007 DEPDC5O75140 1603 aa22.66■■□□□ 1.22
PDLIM5-202ENST00000318007 REREQ9P2R6 1566 aa22.65■■□□□ 1.22
PDLIM5-202ENST00000318007 WASHC2CQ9Y4E1 1318 aa22.65■■□□□ 1.22
PDLIM5-202ENST00000318007 PKD2Q13563 968 aa22.65■■□□□ 1.22
PDLIM5-202ENST00000318007 PRDM15P57071 1507 aaPredicted RBP22.64■■□□□ 1.22
PDLIM5-202ENST00000318007 KANK1Q14678 1352 aa22.64■■□□□ 1.21
PDLIM5-202ENST00000318007 RNF17Q9BXT8 1623 aaKnown RBP22.64■■□□□ 1.21
PDLIM5-202ENST00000318007 CEP152O94986 1710 aa22.63■■□□□ 1.21
PDLIM5-202ENST00000318007 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
PDLIM5-202ENST00000318007 IQGAP3Q86VI3 1631 aa22.61■■□□□ 1.21
PDLIM5-202ENST00000318007 AGLP35573 1532 aa22.6■■□□□ 1.21
PDLIM5-202ENST00000318007 KDM5DQ9BY66 1539 aa22.6■■□□□ 1.21
PDLIM5-202ENST00000318007 BCORL1Q5H9F3 1711 aa22.6■■□□□ 1.21
PDLIM5-202ENST00000318007 ESF1Q9H501 851 aaKnown RBP22.57■■□□□ 1.2
PDLIM5-202ENST00000318007 NEUROD1Q13562 356 aa22.56■■□□□ 1.2
PDLIM5-202ENST00000318007 SIN3AQ96ST3 1273 aa22.56■■□□□ 1.2
PDLIM5-202ENST00000318007 ABCC3O15438 1527 aa22.56■■□□□ 1.2
PDLIM5-202ENST00000318007 CLTCQ00610 1675 aaKnown RBP22.55■■□□□ 1.2
PDLIM5-202ENST00000318007 VWDEQ8N2E2 1590 aa22.55■■□□□ 1.2
PDLIM5-202ENST00000318007 CFAP65Q6ZU64 1925 aaKnown RBP22.53■■□□□ 1.2
PDLIM5-202ENST00000318007 E9PCH4 1651 aa22.52■■□□□ 1.2
PDLIM5-202ENST00000318007 ACIN1Q9UKV3 1341 aaKnown RBP22.51■■□□□ 1.19
PDLIM5-202ENST00000318007 TET3O43151 1660 aa22.51■■□□□ 1.19
PDLIM5-202ENST00000318007 CAMSAP1Q5T5Y3 1602 aa22.5■■□□□ 1.19
PDLIM5-202ENST00000318007 EFCAB6Q5THR3 1501 aa22.5■■□□□ 1.19
PDLIM5-202ENST00000318007 NPATQ14207 1427 aa22.48■■□□□ 1.19
PDLIM5-202ENST00000318007 ZC3H13Q5T200 1668 aaKnown RBP22.47■■□□□ 1.19
PDLIM5-202ENST00000318007 CEBPAP49715 358 aaPredicted RBP22.47■■□□□ 1.19
PDLIM5-202ENST00000318007 FBXO31Q5XUX0 539 aaPredicted RBP22.47■■□□□ 1.19
PDLIM5-202ENST00000318007 FER1L4A9Z1Z3 1794 aa22.46■■□□□ 1.19
PDLIM5-202ENST00000318007 LMTK2Q8IWU2 1503 aa22.45■■□□□ 1.18
PDLIM5-202ENST00000318007 MADDQ8WXG6 1647 aa22.44■■□□□ 1.18
PDLIM5-202ENST00000318007 ANKRD30BQ9BXX2 1392 aa22.44■■□□□ 1.18
PDLIM5-202ENST00000318007 UGGT1Q9NYU2 1555 aa22.42■■□□□ 1.18
PDLIM5-202ENST00000318007 ZMYM3Q14202 1370 aa22.42■■□□□ 1.18
PDLIM5-202ENST00000318007 PLA2R1Q13018 1463 aa22.41■■□□□ 1.18
PDLIM5-202ENST00000318007 RIMS1Q86UR5 1692 aaKnown RBP22.4■■□□□ 1.18
PDLIM5-202ENST00000318007 PPP6R1Q9UPN7 881 aa22.39■■□□□ 1.18
PDLIM5-202ENST00000318007 SPHKAPQ2M3C7 1700 aa22.39■■□□□ 1.18
PDLIM5-202ENST00000318007 CCDC144AA2RUR9 1427 aa22.38■■□□□ 1.17
PDLIM5-202ENST00000318007 CLSPNQ9HAW4 1339 aa22.36■■□□□ 1.17
PDLIM5-202ENST00000318007 CHGAP10645 457 aaKnown RBP22.35■■□□□ 1.17
PDLIM5-202ENST00000318007 ADAMTSL3P82987 1691 aa22.34■■□□□ 1.17
PDLIM5-202ENST00000318007 PREX1Q8TCU6 1659 aa22.34■■□□□ 1.17
PDLIM5-202ENST00000318007 RPRD2Q5VT52 1461 aaKnown RBP22.34■■□□□ 1.17
PDLIM5-202ENST00000318007 RGL3Q3MIN7 710 aa22.34■■□□□ 1.17
PDLIM5-202ENST00000318007 CNTLNQ9NXG0 1405 aa22.34■■□□□ 1.17
PDLIM5-202ENST00000318007 C3P01024 1663 aa22.33■■□□□ 1.17
PDLIM5-202ENST00000318007 ARHGAP31Q2M1Z3 1444 aa22.33■■□□□ 1.17
PDLIM5-202ENST00000318007 TRPM2O94759 1503 aa22.33■■□□□ 1.17
PDLIM5-202ENST00000318007 CLTCL1P53675 1640 aa22.32■■□□□ 1.16
PDLIM5-202ENST00000318007 ERVK-7P63135 1459 aa22.32■■□□□ 1.16
PDLIM5-202ENST00000318007 SYNMO15061 1565 aa22.32■■□□□ 1.16
PDLIM5-202ENST00000318007 PTPRTO14522 1441 aa22.31■■□□□ 1.16
PDLIM5-202ENST00000318007 TONSLQ96HA7 1378 aa22.3■■□□□ 1.16
PDLIM5-202ENST00000318007 MROH2AA6NES4 1674 aa22.3■■□□□ 1.16
PDLIM5-202ENST00000318007 NOS1P29475 1434 aa22.29■■□□□ 1.16
PDLIM5-202ENST00000318007 KDM4FA0A1W2PPD8 638 aa22.27■■□□□ 1.15
PDLIM5-202ENST00000318007 IDI1Q13907 227 aa22.27■■□□□ 1.15
PDLIM5-202ENST00000318007 SENP3Q9H4L4 574 aaPredicted RBP22.25■■□□□ 1.15
PDLIM5-202ENST00000318007 SPATA31D1Q6ZQQ2 1576 aa22.25■■□□□ 1.15
PDLIM5-202ENST00000318007 TNRQ92752 1358 aa22.24■■□□□ 1.15
PDLIM5-202ENST00000318007 ZNF326Q5BKZ1 582 aaKnown RBP22.23■■□□□ 1.15
PDLIM5-202ENST00000318007 L3MBTL2Q969R5 705 aa22.23■■□□□ 1.15
PDLIM5-202ENST00000318007 STAG3Q9UJ98 1225 aa22.23■■□□□ 1.15
PDLIM5-202ENST00000318007 KDM2AQ9Y2K7 1162 aa22.23■■□□□ 1.15
PDLIM5-202ENST00000318007 PTPRMP28827 1452 aa22.23■■□□□ 1.15
PDLIM5-202ENST00000318007 NUTM2DQ5VT03 806 aaPredicted RBP22.21■■□□□ 1.15
PDLIM5-202ENST00000318007 DCAF11Q8TEB1 546 aa22.2■■□□□ 1.14
PDLIM5-202ENST00000318007 PIK3C2BO00750 1634 aa22.19■■□□□ 1.14
PDLIM5-202ENST00000318007 SLC52A1Q9NWF4 448 aa22.19■■□□□ 1.14
PDLIM5-202ENST00000318007 KIF1BO60333 1816 aa22.19■■□□□ 1.14
PDLIM5-202ENST00000318007 ZEB1P37275 1124 aaPredicted RBP22.18■■□□□ 1.14
PDLIM5-202ENST00000318007 MYO5BQ9ULV0 1848 aa22.16■■□□□ 1.14
PDLIM5-202ENST00000318007 SPATA31E1Q6ZUB1 1445 aa22.16■■□□□ 1.14
PDLIM5-202ENST00000318007 MYO3AQ8NEV4 1616 aa22.13■■□□□ 1.13
PDLIM5-202ENST00000318007 ADGRB3O60242 1522 aa22.13■■□□□ 1.13
PDLIM5-202ENST00000318007 TMEM131LA2VDJ0 1609 aa22.11■■□□□ 1.13
PDLIM5-202ENST00000318007 PPP1R15AO75807 674 aaPredicted RBP22.08■■□□□ 1.12
PDLIM5-202ENST00000318007 A2ML1A8K2U0 1454 aa22.08■■□□□ 1.12
PDLIM5-202ENST00000318007 NLRP1Q9C000 1473 aa22.06■■□□□ 1.12
PDLIM5-202ENST00000318007 NBPF8Q3BBV2 869 aa22.06■■□□□ 1.12
PDLIM5-202ENST00000318007 UBR1Q8IWV7 1749 aa22.06■■□□□ 1.12
PDLIM5-202ENST00000318007 TIMELESSQ9UNS1 1208 aa22.05■■□□□ 1.12
PDLIM5-202ENST00000318007 CEP170BQ9Y4F5 1589 aaPredicted RBP22.05■■□□□ 1.12
PDLIM5-202ENST00000318007 ADGRF5Q8IZF2 1346 aa22.04■■□□□ 1.12
PDLIM5-202ENST00000318007 UHRF1BP1Q6BDS2 1440 aa22.02■■□□□ 1.12
PDLIM5-202ENST00000318007 NEXMIFQ5QGS0 1516 aa22.02■■□□□ 1.11
PDLIM5-202ENST00000318007 PPLO60437 1756 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms