RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 RCAN3Q9UKA8 241 aa17.94■□□□□ 0.46
TRIM25-201ENST00000316881 C1orf141Q5JVX7 400 aa17.93■□□□□ 0.46
TRIM25-201ENST00000316881 ATAD2BQ9ULI0 1458 aa17.93■□□□□ 0.46
TRIM25-201ENST00000316881 CHAF1AQ13111 956 aaPredicted RBP17.93■□□□□ 0.46
TRIM25-201ENST00000316881 DEKP35659 375 aaKnown RBP17.93■□□□□ 0.46
TRIM25-201ENST00000316881 PMFBP1Q8TBY8 1022 aa17.93■□□□□ 0.46
TRIM25-201ENST00000316881 CCDC34Q96HJ3 373 aa17.93■□□□□ 0.46
TRIM25-201ENST00000316881 COG3Q96JB2 828 aa17.92■□□□□ 0.46
TRIM25-201ENST00000316881 CCDC144AA2RUR9 1427 aa17.91■□□□□ 0.46
TRIM25-201ENST00000316881 DRC7Q8IY82 874 aa17.91■□□□□ 0.46
TRIM25-201ENST00000316881 KIAA2012Q0VF49 1180 aa17.91■□□□□ 0.46
TRIM25-201ENST00000316881 MEX3CQ5U5Q3 659 aaKnown RBP17.9■□□□□ 0.46
TRIM25-201ENST00000316881 TRIM6-TRIM34B2RNG4 842 aa17.9■□□□□ 0.46
TRIM25-201ENST00000316881 MSH5O43196 834 aa17.9■□□□□ 0.46
TRIM25-201ENST00000316881 NLRP13Q86W25 1043 aa17.89■□□□□ 0.45
TRIM25-201ENST00000316881 EVC2Q86UK5 1308 aa17.89■□□□□ 0.45
TRIM25-201ENST00000316881 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
TRIM25-201ENST00000316881 HSP90B1P14625 803 aaKnown RBP17.87■□□□□ 0.45
TRIM25-201ENST00000316881 FAM69CQ0P6D2 419 aa17.87■□□□□ 0.45
TRIM25-201ENST00000316881 TEFQ10587 303 aa17.86■□□□□ 0.45
TRIM25-201ENST00000316881 SPRYD3Q8NCJ5 442 aa17.86■□□□□ 0.45
TRIM25-201ENST00000316881 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRIM25-201ENST00000316881 TOMM22Q9NS69 142 aa17.85■□□□□ 0.45
TRIM25-201ENST00000316881 PTMSP20962 102 aa17.85■□□□□ 0.45
TRIM25-201ENST00000316881 TTC5Q8N0Z6 440 aa17.85■□□□□ 0.45
TRIM25-201ENST00000316881 PHLDB1Q86UU1 1377 aa17.85■□□□□ 0.45
TRIM25-201ENST00000316881 CENPJQ9HC77 1338 aaPredicted RBP17.84■□□□□ 0.45
TRIM25-201ENST00000316881 CCDC146Q8IYE0 955 aa17.84■□□□□ 0.45
TRIM25-201ENST00000316881 GBP4Q96PP9 640 aa17.84■□□□□ 0.45
TRIM25-201ENST00000316881 CGNL1Q0VF96 1302 aa17.84■□□□□ 0.45
TRIM25-201ENST00000316881 TCERG1O14776 1098 aaKnown RBP17.83■□□□□ 0.44
TRIM25-201ENST00000316881 RASSF8Q8NHQ8 419 aa17.83■□□□□ 0.44
TRIM25-201ENST00000316881 PSME1Q06323 249 aa17.83■□□□□ 0.44
TRIM25-201ENST00000316881 PDE3BQ13370 1112 aa17.81■□□□□ 0.44
TRIM25-201ENST00000316881 TPM4P67936 248 aa17.8■□□□□ 0.44
TRIM25-201ENST00000316881 CLUAP1Q96AJ1 413 aa17.8■□□□□ 0.44
TRIM25-201ENST00000316881 MINK1Q8N4C8 1332 aaPredicted RBP17.8■□□□□ 0.44
TRIM25-201ENST00000316881 NEXNQ0ZGT2 675 aa17.8■□□□□ 0.44
TRIM25-201ENST00000316881 KIF3AQ9Y496 699 aa17.8■□□□□ 0.44
TRIM25-201ENST00000316881 MARCH6O60337 910 aa17.79■□□□□ 0.44
TRIM25-201ENST00000316881 SYAP1Q96A49 352 aaPredicted RBP17.79■□□□□ 0.44
TRIM25-201ENST00000316881 NAP1L5Q96NT1 182 aaPredicted RBP17.79■□□□□ 0.44
TRIM25-201ENST00000316881 ATF3P18847 181 aa17.79■□□□□ 0.44
TRIM25-201ENST00000316881 MSNP26038 577 aaKnown RBP17.78■□□□□ 0.44
TRIM25-201ENST00000316881 NOL10Q9BSC4 688 aaKnown RBP17.77■□□□□ 0.44
TRIM25-201ENST00000316881 KIF15Q9NS87 1388 aa17.77■□□□□ 0.44
TRIM25-201ENST00000316881 VPS53Q5VIR6 699 aa17.77■□□□□ 0.43
TRIM25-201ENST00000316881 ST20-MTHFSA0A0A6YYL1 179 aa17.76■□□□□ 0.43
TRIM25-201ENST00000316881 CSPP1Q1MSJ5 1256 aa17.76■□□□□ 0.43
TRIM25-201ENST00000316881 LRRFIP1Q32MZ4 808 aaKnown RBP17.76■□□□□ 0.43
TRIM25-201ENST00000316881 PANK3Q9H999 370 aa17.76■□□□□ 0.43
TRIM25-201ENST00000316881 SYTL4Q96C24 671 aaPredicted RBP17.75■□□□□ 0.43
TRIM25-201ENST00000316881 CHMP4CQ96CF2 233 aa17.75■□□□□ 0.43
TRIM25-201ENST00000316881 IPO9Q96P70 1041 aaKnown RBP17.75■□□□□ 0.43
TRIM25-201ENST00000316881 AMOTL1Q8IY63 956 aa17.75■□□□□ 0.43
TRIM25-201ENST00000316881 MFAP1P55081 439 aaKnown RBP17.75■□□□□ 0.43
TRIM25-201ENST00000316881 TRIM34Q9BYJ4 488 aa17.74■□□□□ 0.43
TRIM25-201ENST00000316881 KIF21BO75037 1637 aa17.73■□□□□ 0.43
TRIM25-201ENST00000316881 PRKRIP1Q9H875 184 aaPredicted RBP17.73■□□□□ 0.43
TRIM25-201ENST00000316881 MYBBP1AQ9BQG0 1328 aaKnown RBP17.72■□□□□ 0.43
TRIM25-201ENST00000316881 RRP7AQ9Y3A4 280 aaKnown RBP17.72■□□□□ 0.43
TRIM25-201ENST00000316881 KIF16BQ96L93 1317 aa17.71■□□□□ 0.43
TRIM25-201ENST00000316881 ELL2O00472 640 aaPredicted RBP17.71■□□□□ 0.42
TRIM25-201ENST00000316881 CTDP1Q9Y5B0 961 aaPredicted RBP17.71■□□□□ 0.42
TRIM25-201ENST00000316881 DDX58O95786 925 aaKnown RBP17.7■□□□□ 0.42
TRIM25-201ENST00000316881 NGEFQ8N5V2 710 aa17.7■□□□□ 0.42
TRIM25-201ENST00000316881 AKAP17AQ02040 695 aaKnown RBP17.7■□□□□ 0.42
TRIM25-201ENST00000316881 NOC3LQ8WTT2 800 aaKnown RBP17.69■□□□□ 0.42
TRIM25-201ENST00000316881 C9orf78Q9NZ63 289 aaPredicted RBP17.69■□□□□ 0.42
TRIM25-201ENST00000316881 GAPVD1Q14C86 1478 aa17.69■□□□□ 0.42
TRIM25-201ENST00000316881 EIF2S2P20042 333 aaKnown RBP17.69■□□□□ 0.42
TRIM25-201ENST00000316881 RAPGEF4Q8WZA2 1011 aa17.69■□□□□ 0.42
TRIM25-201ENST00000316881 ST18O60284 1047 aa17.69■□□□□ 0.42
TRIM25-201ENST00000316881 DIAPH1O60610 1272 aaKnown RBP17.69■□□□□ 0.42
TRIM25-201ENST00000316881 STAC3Q96MF2 364 aa17.68■□□□□ 0.42
TRIM25-201ENST00000316881 SYNE3Q6ZMZ3 975 aa17.68■□□□□ 0.42
TRIM25-201ENST00000316881 SF3A1Q15459 793 aaKnown RBP17.67■□□□□ 0.42
TRIM25-201ENST00000316881 ZBED9Q6R2W3 1325 aa17.67■□□□□ 0.42
TRIM25-201ENST00000316881 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
TRIM25-201ENST00000316881 VPS37DQ86XT2 251 aa17.67■□□□□ 0.42
TRIM25-201ENST00000316881 PRM3Q9NNZ6 103 aa17.67■□□□□ 0.42
TRIM25-201ENST00000316881 IGF1RP08069 1367 aa17.67■□□□□ 0.42
TRIM25-201ENST00000316881 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
TRIM25-201ENST00000316881 CEP89Q96ST8 783 aa17.66■□□□□ 0.42
TRIM25-201ENST00000316881 E9PSI1 815 aa17.66■□□□□ 0.42
TRIM25-201ENST00000316881 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.65■□□□□ 0.42
TRIM25-201ENST00000316881 ZKSCAN2Q63HK3 967 aa17.65■□□□□ 0.42
TRIM25-201ENST00000316881 NOL8Q76FK4 1167 aaKnown RBP17.65■□□□□ 0.42
TRIM25-201ENST00000316881 SLKQ9H2G2 1235 aaPredicted RBP17.65■□□□□ 0.42
TRIM25-201ENST00000316881 RILPL2Q969X0 211 aa17.65■□□□□ 0.42
TRIM25-201ENST00000316881 TCEAL9Q9UHQ7 104 aa17.64■□□□□ 0.41
TRIM25-201ENST00000316881 MYOM3Q5VTT5 1437 aa17.64■□□□□ 0.41
TRIM25-201ENST00000316881 CPLX2Q6PUV4 134 aaKnown RBP17.64■□□□□ 0.41
TRIM25-201ENST00000316881 USP47Q96K76 1375 aa17.64■□□□□ 0.41
TRIM25-201ENST00000316881 KLHL34Q8N239 644 aa17.63■□□□□ 0.41
TRIM25-201ENST00000316881 CREBRFQ8IUR6 639 aa17.63■□□□□ 0.41
TRIM25-201ENST00000316881 FGD5Q6ZNL6 1462 aa17.62■□□□□ 0.41
TRIM25-201ENST00000316881 DIAPH3Q9NSV4 1193 aa17.62■□□□□ 0.41
TRIM25-201ENST00000316881 H3BQV1 296 aa17.61■□□□□ 0.41
TRIM25-201ENST00000316881 IFFO2Q5TF58 517 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms