RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 POGZQ7Z3K3 1410 aa10.49□□□□□ -0.73
NPHP1-201ENST00000316534 ZNF518AQ6AHZ1 1483 aa10.49□□□□□ -0.73
NPHP1-201ENST00000316534 TRPM1Q7Z4N2 1603 aa10.49□□□□□ -0.73
NPHP1-201ENST00000316534 PLA2R1Q13018 1463 aa10.48□□□□□ -0.73
NPHP1-201ENST00000316534 ADGRL1O94910 1474 aa10.47□□□□□ -0.73
NPHP1-201ENST00000316534 PTPRTO14522 1441 aa10.47□□□□□ -0.73
NPHP1-201ENST00000316534 KIAA1210Q9ULL0 1709 aa10.47□□□□□ -0.73
NPHP1-201ENST00000316534 DIP2CQ9Y2E4 1556 aa10.46□□□□□ -0.73
NPHP1-201ENST00000316534 EFCAB2Q5VUJ9 269 aa10.46□□□□□ -0.73
NPHP1-201ENST00000316534 SPATA31E1Q6ZUB1 1445 aa10.46□□□□□ -0.73
NPHP1-201ENST00000316534 SIN3AQ96ST3 1273 aa10.46□□□□□ -0.73
NPHP1-201ENST00000316534 CHIC2Q9UKJ5 165 aa10.46□□□□□ -0.74
NPHP1-201ENST00000316534 EFCAB6Q5THR3 1501 aa10.45□□□□□ -0.74
NPHP1-201ENST00000316534 HNRNPMP52272 730 aaKnown RBP eCLIP10.45□□□□□ -0.74
NPHP1-201ENST00000316534 PIK3C2BO00750 1634 aa10.44□□□□□ -0.74
NPHP1-201ENST00000316534 RALGAPBQ86X10 1494 aa10.44□□□□□ -0.74
NPHP1-201ENST00000316534 CLTCL1P53675 1640 aa10.42□□□□□ -0.74
NPHP1-201ENST00000316534 CD109Q6YHK3 1445 aa10.42□□□□□ -0.74
NPHP1-201ENST00000316534 TSPY4P0CV99 314 aa10.42□□□□□ -0.74
NPHP1-201ENST00000316534 TSPY10P0CW01 314 aa10.42□□□□□ -0.74
NPHP1-201ENST00000316534 CAMSAP1Q5T5Y3 1602 aa10.41□□□□□ -0.74
NPHP1-201ENST00000316534 MADDQ8WXG6 1647 aa10.41□□□□□ -0.74
NPHP1-201ENST00000316534 DHX29Q7Z478 1369 aaKnown RBP10.41□□□□□ -0.74
NPHP1-201ENST00000316534 TONSLQ96HA7 1378 aa10.41□□□□□ -0.74
NPHP1-201ENST00000316534 SCAPERQ9BY12 1400 aa10.4□□□□□ -0.74
NPHP1-201ENST00000316534 IQGAP1P46940 1657 aa10.4□□□□□ -0.74
NPHP1-201ENST00000316534 SIGLEC1Q9BZZ2 1709 aa10.4□□□□□ -0.75
NPHP1-201ENST00000316534 DIEXFQ68CQ4 756 aaKnown RBP10.39□□□□□ -0.75
NPHP1-201ENST00000316534 AGLP35573 1532 aa10.39□□□□□ -0.75
NPHP1-201ENST00000316534 NUP155O75694 1391 aa10.39□□□□□ -0.75
NPHP1-201ENST00000316534 MROH2AA6NES4 1674 aa10.38□□□□□ -0.75
NPHP1-201ENST00000316534 ZNF777Q9ULD5 760 aaPredicted RBP10.38□□□□□ -0.75
NPHP1-201ENST00000316534 KIF1BO60333 1816 aa10.38□□□□□ -0.75
NPHP1-201ENST00000316534 A2MP01023 1474 aa10.38□□□□□ -0.75
NPHP1-201ENST00000316534 NRXN1Q9ULB1 1477 aa10.37□□□□□ -0.75
NPHP1-201ENST00000316534 GPRASP1Q5JY77 1395 aa10.37□□□□□ -0.75
NPHP1-201ENST00000316534 PPLO60437 1756 aa10.36□□□□□ -0.75
NPHP1-201ENST00000316534 ABCC3O15438 1527 aa10.36□□□□□ -0.75
NPHP1-201ENST00000316534 ADGRB3O60242 1522 aa10.36□□□□□ -0.75
NPHP1-201ENST00000316534 MYO3AQ8NEV4 1616 aa10.36□□□□□ -0.75
NPHP1-201ENST00000316534 SLC4A1APQ9BWU0 796 aaKnown RBP10.36□□□□□ -0.75
NPHP1-201ENST00000316534 ARHGAP31Q2M1Z3 1444 aa10.35□□□□□ -0.75
NPHP1-201ENST00000316534 MYOM2P54296 1465 aa10.35□□□□□ -0.75
NPHP1-201ENST00000316534 PRAG1Q86YV5 1406 aa10.34□□□□□ -0.75
NPHP1-201ENST00000316534 SPAG9O60271 1321 aaKnown RBP10.34□□□□□ -0.75
NPHP1-201ENST00000316534 ARHGEF40Q8TER5 1519 aa10.34□□□□□ -0.75
NPHP1-201ENST00000316534 L3MBTL2Q969R5 705 aa10.34□□□□□ -0.75
NPHP1-201ENST00000316534 PKD2Q13563 968 aa10.33□□□□□ -0.76
NPHP1-201ENST00000316534 KCNH8Q96L42 1107 aa10.33□□□□□ -0.76
NPHP1-201ENST00000316534 TRIM52Q96A61 297 aa10.33□□□□□ -0.76
NPHP1-201ENST00000316534 SYNMO15061 1565 aa10.32□□□□□ -0.76
NPHP1-201ENST00000316534 KDM5AP29375 1690 aaKnown RBP10.32□□□□□ -0.76
NPHP1-201ENST00000316534 PREX1Q8TCU6 1659 aa10.32□□□□□ -0.76
NPHP1-201ENST00000316534 SETBP1Q9Y6X0 1596 aa10.31□□□□□ -0.76
NPHP1-201ENST00000316534 NBPF8Q3BBV2 869 aa10.31□□□□□ -0.76
NPHP1-201ENST00000316534 NEUROD1Q13562 356 aa10.3□□□□□ -0.76
NPHP1-201ENST00000316534 NOS1P29475 1434 aa10.3□□□□□ -0.76
NPHP1-201ENST00000316534 FOXD1Q16676 465 aa10.29□□□□□ -0.76
NPHP1-201ENST00000316534 AFAP1Q8N556 730 aa10.29□□□□□ -0.76
NPHP1-201ENST00000316534 CCDC144AA2RUR9 1427 aa10.29□□□□□ -0.76
NPHP1-201ENST00000316534 NPM1P06748 294 aaKnown RBP eCLIP10.28□□□□□ -0.76
NPHP1-201ENST00000316534 ARID4BQ4LE39 1312 aaPredicted RBP10.28□□□□□ -0.76
NPHP1-201ENST00000316534 CNTLNQ9NXG0 1405 aa10.28□□□□□ -0.76
NPHP1-201ENST00000316534 STAC3Q96MF2 364 aa10.27□□□□□ -0.77
NPHP1-201ENST00000316534 SCAF1Q9H7N4 1312 aaKnown RBP10.27□□□□□ -0.77
NPHP1-201ENST00000316534 TSPOAP1O95153 1857 aa10.26□□□□□ -0.77
NPHP1-201ENST00000316534 TMEM131LA2VDJ0 1609 aa10.26□□□□□ -0.77
NPHP1-201ENST00000316534 NPATQ14207 1427 aa10.25□□□□□ -0.77
NPHP1-201ENST00000316534 SPATA31D1Q6ZQQ2 1576 aa10.25□□□□□ -0.77
NPHP1-201ENST00000316534 MYOM1P52179 1685 aa10.25□□□□□ -0.77
NPHP1-201ENST00000316534 SETD1AO15047 1707 aaKnown RBP10.25□□□□□ -0.77
NPHP1-201ENST00000316534 NEXMIFQ5QGS0 1516 aa10.24□□□□□ -0.77
NPHP1-201ENST00000316534 UGGT1Q9NYU2 1555 aa10.24□□□□□ -0.77
NPHP1-201ENST00000316534 KANK1Q14678 1352 aa10.24□□□□□ -0.77
NPHP1-201ENST00000316534 CCDC7Q96M83 1385 aa10.23□□□□□ -0.77
NPHP1-201ENST00000316534 MIER1Q8N108 512 aa10.23□□□□□ -0.77
NPHP1-201ENST00000316534 YEATS2Q9ULM3 1422 aa10.23□□□□□ -0.77
NPHP1-201ENST00000316534 MYO5BQ9ULV0 1848 aa10.23□□□□□ -0.77
NPHP1-201ENST00000316534 WASHC2AQ641Q2 1341 aa10.22□□□□□ -0.77
NPHP1-201ENST00000316534 ADGRB1O14514 1584 aa10.22□□□□□ -0.77
NPHP1-201ENST00000316534 ZFYVE9O95405 1425 aa10.22□□□□□ -0.77
NPHP1-201ENST00000316534 HSPA5P11021 654 aaKnown RBP10.22□□□□□ -0.77
NPHP1-201ENST00000316534 CLTCQ00610 1675 aaKnown RBP10.22□□□□□ -0.77
NPHP1-201ENST00000316534 COL17A1Q9UMD9 1497 aaPredicted RBP10.22□□□□□ -0.77
NPHP1-201ENST00000316534 AEBP2Q6ZN18 517 aaPredicted RBP10.2□□□□□ -0.78
NPHP1-201ENST00000316534 EIF4G2P78344 907 aaKnown RBP eCLIP10.2□□□□□ -0.78
NPHP1-201ENST00000316534 USP47Q96K76 1375 aa10.2□□□□□ -0.78
NPHP1-201ENST00000316534 ARHGEF28Q8N1W1 1705 aaKnown RBP10.19□□□□□ -0.78
NPHP1-201ENST00000316534 PPP6R1Q9UPN7 881 aa10.19□□□□□ -0.78
NPHP1-201ENST00000316534 PIK3C2GO75747 1445 aa10.18□□□□□ -0.78
NPHP1-201ENST00000316534 CCER2I3L3R5 266 aa10.18□□□□□ -0.78
NPHP1-201ENST00000316534 C11orf95C9JLR9 678 aaPredicted RBP10.17□□□□□ -0.78
NPHP1-201ENST00000316534 ERVK-7P63135 1459 aa10.17□□□□□ -0.78
NPHP1-201ENST00000316534 ROCK2O75116 1388 aaKnown RBP10.16□□□□□ -0.78
NPHP1-201ENST00000316534 KNDC1Q76NI1 1749 aa10.16□□□□□ -0.78
NPHP1-201ENST00000316534 USP32Q8NFA0 1604 aa10.16□□□□□ -0.78
NPHP1-201ENST00000316534 CYB5RLQ6IPT4 315 aa10.16□□□□□ -0.78
NPHP1-201ENST00000316534 SCAF11Q99590 1463 aaKnown RBP10.15□□□□□ -0.78
NPHP1-201ENST00000316534 KIF7Q2M1P5 1343 aa10.15□□□□□ -0.78
NPHP1-201ENST00000316534 QRICH2Q9H0J4 1663 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms