RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 POLR1AO95602 1720 aaPredicted RBP20.38■□□□□ 0.85
CLK4-201ENST00000316308 TRAPPC8Q9Y2L5 1435 aa20.38■□□□□ 0.85
CLK4-201ENST00000316308 RSPH4AQ5TD94 716 aa20.38■□□□□ 0.85
CLK4-201ENST00000316308 AFAP1Q8N556 730 aa20.38■□□□□ 0.85
CLK4-201ENST00000316308 TSHZ2Q9NRE2 1034 aa20.38■□□□□ 0.85
CLK4-201ENST00000316308 RALGAPBQ86X10 1494 aa20.37■□□□□ 0.85
CLK4-201ENST00000316308 PLCH2O75038 1416 aa20.35■□□□□ 0.85
CLK4-201ENST00000316308 CCDC144AA2RUR9 1427 aa20.33■□□□□ 0.85
CLK4-201ENST00000316308 NEFLP07196 543 aa20.32■□□□□ 0.84
CLK4-201ENST00000316308 ROCK2O75116 1388 aaKnown RBP20.32■□□□□ 0.84
CLK4-201ENST00000316308 EFCAB2Q5VUJ9 269 aa20.32■□□□□ 0.84
CLK4-201ENST00000316308 MAST1Q9Y2H9 1570 aa20.31■□□□□ 0.84
CLK4-201ENST00000316308 UNC13BO14795 1591 aa20.29■□□□□ 0.84
CLK4-201ENST00000316308 A2MP01023 1474 aa20.28■□□□□ 0.84
CLK4-201ENST00000316308 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
CLK4-201ENST00000316308 PLXNC1O60486 1568 aa20.27■□□□□ 0.83
CLK4-201ENST00000316308 UHRF1BP1LA0JNW5 1464 aa20.26■□□□□ 0.83
CLK4-201ENST00000316308 ABCC1P33527 1531 aa20.26■□□□□ 0.83
CLK4-201ENST00000316308 DUOX2Q9NRD8 1548 aa20.24■□□□□ 0.83
CLK4-201ENST00000316308 IQGAP3Q86VI3 1631 aa20.23■□□□□ 0.83
CLK4-201ENST00000316308 SPAG9O60271 1321 aaKnown RBP20.23■□□□□ 0.83
CLK4-201ENST00000316308 TRPM1Q7Z4N2 1603 aa20.22■□□□□ 0.83
CLK4-201ENST00000316308 ZBED9Q6R2W3 1325 aa20.19■□□□□ 0.82
CLK4-201ENST00000316308 ERBINQ96RT1 1412 aa20.19■□□□□ 0.82
CLK4-201ENST00000316308 MAGI2Q86UL8 1455 aa20.18■□□□□ 0.82
CLK4-201ENST00000316308 MYT1LQ9UL68 1186 aa20.17■□□□□ 0.82
CLK4-201ENST00000316308 DISP3Q9P2K9 1392 aa20.17■□□□□ 0.82
CLK4-201ENST00000316308 ARID4BQ4LE39 1312 aaPredicted RBP20.17■□□□□ 0.82
CLK4-201ENST00000316308 TESK2Q96S53 571 aa20.16■□□□□ 0.82
CLK4-201ENST00000316308 WDR7Q9Y4E6 1490 aa20.16■□□□□ 0.82
CLK4-201ENST00000316308 PNISRQ8TF01 805 aaKnown RBP20.15■□□□□ 0.82
CLK4-201ENST00000316308 ZFYVE16Q7Z3T8 1539 aa20.15■□□□□ 0.82
CLK4-201ENST00000316308 FANCAO15360 1455 aa20.14■□□□□ 0.81
CLK4-201ENST00000316308 SCAPERQ9BY12 1400 aa20.14■□□□□ 0.81
CLK4-201ENST00000316308 E9PCH4 1651 aa20.13■□□□□ 0.81
CLK4-201ENST00000316308 TMC1Q8TDI8 760 aa20.13■□□□□ 0.81
CLK4-201ENST00000316308 KIF3BO15066 747 aa20.12■□□□□ 0.81
CLK4-201ENST00000316308 GPRASP1Q5JY77 1395 aa20.11■□□□□ 0.81
CLK4-201ENST00000316308 ASXL2Q76L83 1435 aa20.1■□□□□ 0.81
CLK4-201ENST00000316308 ATP10AO60312 1499 aa20.1■□□□□ 0.81
CLK4-201ENST00000316308 PER1O15534 1290 aaPredicted RBP20.1■□□□□ 0.81
CLK4-201ENST00000316308 CC2D1BQ5T0F9 858 aaKnown RBP20.09■□□□□ 0.81
CLK4-201ENST00000316308 SALL2Q9Y467 1007 aaPredicted RBP20.08■□□□□ 0.8
CLK4-201ENST00000316308 PRDM15P57071 1507 aaPredicted RBP20.07■□□□□ 0.8
CLK4-201ENST00000316308 ADGRL1O94910 1474 aa20.07■□□□□ 0.8
CLK4-201ENST00000316308 ABCA9Q8IUA7 1624 aa20.06■□□□□ 0.8
CLK4-201ENST00000316308 UGGT1Q9NYU2 1555 aa20.06■□□□□ 0.8
CLK4-201ENST00000316308 ATP7AQ04656 1500 aa20.06■□□□□ 0.8
CLK4-201ENST00000316308 PANK3Q9H999 370 aa20.05■□□□□ 0.8
CLK4-201ENST00000316308 RTEL1-TNFRSF6BF6WH68 1400 aa20.05■□□□□ 0.8
CLK4-201ENST00000316308 B4GALNT3Q6L9W6 998 aa20.04■□□□□ 0.8
CLK4-201ENST00000316308 MYBBP1AQ9BQG0 1328 aaKnown RBP20.04■□□□□ 0.8
CLK4-201ENST00000316308 COL17A1Q9UMD9 1497 aaPredicted RBP20.04■□□□□ 0.8
CLK4-201ENST00000316308 CLTCL1P53675 1640 aa20.03■□□□□ 0.8
CLK4-201ENST00000316308 INO80Q9ULG1 1556 aaPredicted RBP20.02■□□□□ 0.8
CLK4-201ENST00000316308 ARAP3Q8WWN8 1544 aa20.02■□□□□ 0.79
CLK4-201ENST00000316308 RBM19Q9Y4C8 960 aaKnown RBP20.01■□□□□ 0.79
CLK4-201ENST00000316308 RALBP1Q15311 655 aa19.99■□□□□ 0.79
CLK4-201ENST00000316308 LRPPRCP42704 1394 aaKnown RBP19.99■□□□□ 0.79
CLK4-201ENST00000316308 PARD3Q8TEW0 1356 aa19.99■□□□□ 0.79
CLK4-201ENST00000316308 PTPRTO14522 1441 aa19.99■□□□□ 0.79
CLK4-201ENST00000316308 MADDQ8WXG6 1647 aa19.99■□□□□ 0.79
CLK4-201ENST00000316308 TRPM2O94759 1503 aa19.99■□□□□ 0.79
CLK4-201ENST00000316308 DEPDC5O75140 1603 aa19.98■□□□□ 0.79
CLK4-201ENST00000316308 OSCARQ8IYS5 282 aa19.98■□□□□ 0.79
CLK4-201ENST00000316308 SPHKAPQ2M3C7 1700 aa19.98■□□□□ 0.79
CLK4-201ENST00000316308 NUDCQ9Y266 331 aa19.97■□□□□ 0.79
CLK4-201ENST00000316308 MROH1Q8NDA8 1641 aa19.97■□□□□ 0.79
CLK4-201ENST00000316308 BRD4O60885 1362 aaPredicted RBP19.97■□□□□ 0.79
CLK4-201ENST00000316308 TMF1P82094 1093 aa19.97■□□□□ 0.79
CLK4-201ENST00000316308 KTN1Q86UP2 1357 aaKnown RBP19.97■□□□□ 0.79
CLK4-201ENST00000316308 SMG6Q86US8 1419 aaKnown RBP19.97■□□□□ 0.79
CLK4-201ENST00000316308 RNF17Q9BXT8 1623 aaKnown RBP19.96■□□□□ 0.79
CLK4-201ENST00000316308 EIF2AK4Q9P2K8 1649 aaKnown RBP19.95■□□□□ 0.78
CLK4-201ENST00000316308 LAMC1P11047 1609 aa19.95■□□□□ 0.78
CLK4-201ENST00000316308 CFAP70Q5T0N1 1121 aa19.95■□□□□ 0.78
CLK4-201ENST00000316308 KIDINS220Q9ULH0 1771 aa19.95■□□□□ 0.78
CLK4-201ENST00000316308 ADGRF5Q8IZF2 1346 aa19.94■□□□□ 0.78
CLK4-201ENST00000316308 PPP4R2Q9NY27 417 aa19.94■□□□□ 0.78
CLK4-201ENST00000316308 CFAP65Q6ZU64 1925 aaKnown RBP19.94■□□□□ 0.78
CLK4-201ENST00000316308 NLRP13Q86W25 1043 aa19.94■□□□□ 0.78
CLK4-201ENST00000316308 VWDEQ8N2E2 1590 aa19.94■□□□□ 0.78
CLK4-201ENST00000316308 TET3O43151 1660 aa19.93■□□□□ 0.78
CLK4-201ENST00000316308 CEP152O94986 1710 aa19.93■□□□□ 0.78
CLK4-201ENST00000316308 KANK1Q14678 1352 aa19.92■□□□□ 0.78
CLK4-201ENST00000316308 GGT6Q6P531 493 aa19.91■□□□□ 0.78
CLK4-201ENST00000316308 NPM1P06748 294 aaKnown RBP eCLIP19.91■□□□□ 0.78
CLK4-201ENST00000316308 RAPGEF3O95398 923 aa19.9■□□□□ 0.78
CLK4-201ENST00000316308 CDCA7LQ96GN5 454 aa19.9■□□□□ 0.78
CLK4-201ENST00000316308 IQGAP1P46940 1657 aa19.89■□□□□ 0.77
CLK4-201ENST00000316308 CHGAP10645 457 aaKnown RBP19.89■□□□□ 0.77
CLK4-201ENST00000316308 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
CLK4-201ENST00000316308 CD109Q6YHK3 1445 aa19.88■□□□□ 0.77
CLK4-201ENST00000316308 PPRC1Q5VV67 1664 aaKnown RBP19.87■□□□□ 0.77
CLK4-201ENST00000316308 SCAF11Q99590 1463 aaKnown RBP19.85■□□□□ 0.77
CLK4-201ENST00000316308 MROH2AA6NES4 1674 aa19.85■□□□□ 0.77
CLK4-201ENST00000316308 NUTM2DQ5VT03 806 aaPredicted RBP19.85■□□□□ 0.77
CLK4-201ENST00000316308 RNF123Q5XPI4 1314 aa19.84■□□□□ 0.77
CLK4-201ENST00000316308 ZNF518AQ6AHZ1 1483 aa19.84■□□□□ 0.77
CLK4-201ENST00000316308 FRMPD1Q5SYB0 1578 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms