RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 MPHOSPH9Q99550 1183 aa36.31■■■■□ 3.4
CDPF1-201ENST00000314567 UNC13BO14795 1591 aa36.3■■■■□ 3.4
CDPF1-201ENST00000314567 EIF2AK4Q9P2K8 1649 aaKnown RBP36.26■■■■□ 3.4
CDPF1-201ENST00000314567 FOXD1Q16676 465 aa36.26■■■■□ 3.4
CDPF1-201ENST00000314567 SLC4A1APQ9BWU0 796 aaKnown RBP36.26■■■■□ 3.39
CDPF1-201ENST00000314567 ATP10AO60312 1499 aa36.25■■■■□ 3.39
CDPF1-201ENST00000314567 ARHGEF40Q8TER5 1519 aa36.25■■■■□ 3.39
CDPF1-201ENST00000314567 SIGLEC1Q9BZZ2 1709 aa36.23■■■■□ 3.39
CDPF1-201ENST00000314567 KDM5DQ9BY66 1539 aa36.23■■■■□ 3.39
CDPF1-201ENST00000314567 DEPDC5O75140 1603 aa36.22■■■■□ 3.39
CDPF1-201ENST00000314567 MROH1Q8NDA8 1641 aa36.2■■■■□ 3.39
CDPF1-201ENST00000314567 FAM135AQ9P2D6 1515 aa36.2■■■■□ 3.39
CDPF1-201ENST00000314567 GGT6Q6P531 493 aa36.17■■■■□ 3.38
CDPF1-201ENST00000314567 IQGAP3Q86VI3 1631 aa36.16■■■■□ 3.38
CDPF1-201ENST00000314567 PKD2Q13563 968 aa36.14■■■■□ 3.38
CDPF1-201ENST00000314567 RNF17Q9BXT8 1623 aaKnown RBP36.14■■■■□ 3.38
CDPF1-201ENST00000314567 BCORL1Q5H9F3 1711 aa36.14■■■■□ 3.38
CDPF1-201ENST00000314567 PRDM15P57071 1507 aaPredicted RBP36.12■■■■□ 3.37
CDPF1-201ENST00000314567 REREQ9P2R6 1566 aa36.11■■■■□ 3.37
CDPF1-201ENST00000314567 SIN3AQ96ST3 1273 aa36.1■■■■□ 3.37
CDPF1-201ENST00000314567 TIMELESSQ9UNS1 1208 aa36.09■■■■□ 3.37
CDPF1-201ENST00000314567 VWDEQ8N2E2 1590 aa36.07■■■■□ 3.37
CDPF1-201ENST00000314567 CEP152O94986 1710 aa36.04■■■■□ 3.36
CDPF1-201ENST00000314567 KANK1Q14678 1352 aa36.04■■■■□ 3.36
CDPF1-201ENST00000314567 ZNF316A6NFI3 1004 aaPredicted RBP36.03■■■■□ 3.36
CDPF1-201ENST00000314567 AGLP35573 1532 aa36.02■■■■□ 3.36
CDPF1-201ENST00000314567 NEUROD1Q13562 356 aa36.02■■■■□ 3.36
CDPF1-201ENST00000314567 MLECQ14165 292 aa36.02■■■■□ 3.36
CDPF1-201ENST00000314567 ANKRD30BQ9BXX2 1392 aa35.98■■■■□ 3.35
CDPF1-201ENST00000314567 ARID4BQ4LE39 1312 aaPredicted RBP35.98■■■■□ 3.35
CDPF1-201ENST00000314567 E9PCH4 1651 aa35.96■■■■□ 3.35
CDPF1-201ENST00000314567 TET3O43151 1660 aa35.95■■■■□ 3.35
CDPF1-201ENST00000314567 WASHC2CQ9Y4E1 1318 aa35.95■■■■□ 3.35
CDPF1-201ENST00000314567 ABCC3O15438 1527 aa35.94■■■■□ 3.34
CDPF1-201ENST00000314567 LMTK2Q8IWU2 1503 aa35.9■■■■□ 3.34
CDPF1-201ENST00000314567 EFCAB6Q5THR3 1501 aa35.88■■■■□ 3.33
CDPF1-201ENST00000314567 PLA2R1Q13018 1463 aa35.86■■■■□ 3.33
CDPF1-201ENST00000314567 CFAP65Q6ZU64 1925 aaKnown RBP35.86■■■■□ 3.33
CDPF1-201ENST00000314567 CAMSAP1Q5T5Y3 1602 aa35.85■■■■□ 3.33
CDPF1-201ENST00000314567 TONSLQ96HA7 1378 aa35.83■■■■□ 3.33
CDPF1-201ENST00000314567 CLTCQ00610 1675 aaKnown RBP35.81■■■■□ 3.32
CDPF1-201ENST00000314567 ZC3H13Q5T200 1668 aaKnown RBP35.81■■■■□ 3.32
CDPF1-201ENST00000314567 NPATQ14207 1427 aa35.81■■■■□ 3.32
CDPF1-201ENST00000314567 SPHKAPQ2M3C7 1700 aa35.76■■■■□ 3.32
CDPF1-201ENST00000314567 RPRD2Q5VT52 1461 aaKnown RBP35.74■■■■□ 3.31
CDPF1-201ENST00000314567 DIEXFQ68CQ4 756 aaKnown RBP35.73■■■■□ 3.31
CDPF1-201ENST00000314567 PPP1R15AO75807 674 aaPredicted RBP35.71■■■■□ 3.31
CDPF1-201ENST00000314567 PTPRTO14522 1441 aa35.71■■■■□ 3.31
CDPF1-201ENST00000314567 PPP6R1Q9UPN7 881 aa35.7■■■■□ 3.31
CDPF1-201ENST00000314567 CCDC144AA2RUR9 1427 aa35.7■■■■□ 3.3
CDPF1-201ENST00000314567 UGGT1Q9NYU2 1555 aa35.68■■■■□ 3.3
CDPF1-201ENST00000314567 TRPM2O94759 1503 aa35.68■■■■□ 3.3
CDPF1-201ENST00000314567 ESF1Q9H501 851 aaKnown RBP35.67■■■■□ 3.3
CDPF1-201ENST00000314567 ARHGAP31Q2M1Z3 1444 aa35.65■■■■□ 3.3
CDPF1-201ENST00000314567 FBXO31Q5XUX0 539 aaPredicted RBP35.65■■■■□ 3.3
CDPF1-201ENST00000314567 CLTCL1P53675 1640 aa35.64■■■■□ 3.3
CDPF1-201ENST00000314567 FER1L4A9Z1Z3 1794 aa35.6■■■■□ 3.29
CDPF1-201ENST00000314567 L3MBTL2Q969R5 705 aa35.6■■■■□ 3.29
CDPF1-201ENST00000314567 PREX1Q8TCU6 1659 aa35.6■■■■□ 3.29
CDPF1-201ENST00000314567 ZMYM3Q14202 1370 aa35.59■■■■□ 3.29
CDPF1-201ENST00000314567 SYNMO15061 1565 aa35.58■■■■□ 3.29
CDPF1-201ENST00000314567 NOS1P29475 1434 aa35.58■■■■□ 3.29
CDPF1-201ENST00000314567 CNTLNQ9NXG0 1405 aa35.54■■■■□ 3.28
CDPF1-201ENST00000314567 RGL3Q3MIN7 710 aa35.54■■■■□ 3.28
CDPF1-201ENST00000314567 PLPPR3Q6T4P5 718 aa35.53■■■■□ 3.28
CDPF1-201ENST00000314567 MADDQ8WXG6 1647 aa35.53■■■■□ 3.28
CDPF1-201ENST00000314567 ERVK-7P63135 1459 aa35.53■■■■□ 3.28
CDPF1-201ENST00000314567 CEBPAP49715 358 aaPredicted RBP35.52■■■■□ 3.28
CDPF1-201ENST00000314567 MROH2AA6NES4 1674 aa35.49■■■■□ 3.27
CDPF1-201ENST00000314567 ADAMTSL3P82987 1691 aa35.46■■■■□ 3.27
CDPF1-201ENST00000314567 RIMS1Q86UR5 1692 aaKnown RBP35.46■■■■□ 3.27
CDPF1-201ENST00000314567 SPATA31E1Q6ZUB1 1445 aa35.46■■■■□ 3.27
CDPF1-201ENST00000314567 C3P01024 1663 aa35.46■■■■□ 3.27
CDPF1-201ENST00000314567 PIK3C2BO00750 1634 aa35.45■■■■□ 3.27
CDPF1-201ENST00000314567 SPATA31D1Q6ZQQ2 1576 aa35.45■■■■□ 3.26
CDPF1-201ENST00000314567 KIF1BO60333 1816 aa35.44■■■■□ 3.26
CDPF1-201ENST00000314567 IDI1Q13907 227 aa35.43■■■■□ 3.26
CDPF1-201ENST00000314567 CHGAP10645 457 aaKnown RBP35.43■■■■□ 3.26
CDPF1-201ENST00000314567 KDM2AQ9Y2K7 1162 aa35.41■■■■□ 3.26
CDPF1-201ENST00000314567 DCAF11Q8TEB1 546 aa35.41■■■■□ 3.26
CDPF1-201ENST00000314567 ZNF326Q5BKZ1 582 aaKnown RBP35.35■■■■□ 3.25
CDPF1-201ENST00000314567 ADGRB3O60242 1522 aa35.35■■■■□ 3.25
CDPF1-201ENST00000314567 NBPF8Q3BBV2 869 aa35.34■■■■□ 3.25
CDPF1-201ENST00000314567 SLC52A1Q9NWF4 448 aa35.34■■■■□ 3.25
CDPF1-201ENST00000314567 MYO5BQ9ULV0 1848 aa35.33■■■■□ 3.25
CDPF1-201ENST00000314567 TNRQ92752 1358 aa35.32■■■■□ 3.24
CDPF1-201ENST00000314567 TMEM131LA2VDJ0 1609 aa35.27■■■■□ 3.24
CDPF1-201ENST00000314567 NEURL4Q96JN8 1562 aa35.25■■■■□ 3.23
CDPF1-201ENST00000314567 STAG3Q9UJ98 1225 aa35.21■■■■□ 3.23
CDPF1-201ENST00000314567 NUTM2DQ5VT03 806 aaPredicted RBP35.2■■■■□ 3.23
CDPF1-201ENST00000314567 IFT172Q9UG01 1749 aa35.2■■■■□ 3.23
CDPF1-201ENST00000314567 UHRF1BP1Q6BDS2 1440 aa35.18■■■■□ 3.22
CDPF1-201ENST00000314567 PTPRMP28827 1452 aa35.17■■■■□ 3.22
CDPF1-201ENST00000314567 PRAG1Q86YV5 1406 aa35.17■■■■□ 3.22
CDPF1-201ENST00000314567 PPLO60437 1756 aa35.16■■■■□ 3.22
CDPF1-201ENST00000314567 A2ML1A8K2U0 1454 aa35.16■■■■□ 3.22
CDPF1-201ENST00000314567 ADGRF5Q8IZF2 1346 aa35.14■■■■□ 3.22
CDPF1-201ENST00000314567 NEXMIFQ5QGS0 1516 aa35.13■■■■□ 3.22
CDPF1-201ENST00000314567 KDM4FA0A1W2PPD8 638 aa35.12■■■■□ 3.21
CDPF1-201ENST00000314567 SENP3Q9H4L4 574 aaPredicted RBP35.12■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms