RNA–Protein interactions for RNA: ENST00000312123.13

GAPVD1-203, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GAPVD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-203ENST00000312123 WASHC2AQ641Q2 1341 aa8.9□□□□□ -0.98
GAPVD1-203ENST00000312123 MCCP23508 829 aa8.9□□□□□ -0.98
GAPVD1-203ENST00000312123 TERF2IPQ9NYB0 399 aa8.9□□□□□ -0.98
GAPVD1-203ENST00000312123 ZNF330Q9Y3S2 320 aaPredicted RBP8.9□□□□□ -0.98
GAPVD1-203ENST00000312123 CCDC144AA2RUR9 1427 aa8.9□□□□□ -0.98
GAPVD1-203ENST00000312123 FOXD4L5Q5VV16 416 aaPredicted RBP8.9□□□□□ -0.98
GAPVD1-203ENST00000312123 FOXD4L4Q8WXT5 416 aaPredicted RBP8.9□□□□□ -0.98
GAPVD1-203ENST00000312123 HDGFP51858 240 aaKnown RBP8.9□□□□□ -0.99
GAPVD1-203ENST00000312123 GBP4Q96PP9 640 aa8.9□□□□□ -0.99
GAPVD1-203ENST00000312123 CDK11BP21127 795 aaKnown RBP8.89□□□□□ -0.99
GAPVD1-203ENST00000312123 RSPH4AQ5TD94 716 aa8.89□□□□□ -0.99
GAPVD1-203ENST00000312123 KIAA1211Q6ZU35 1233 aa8.89□□□□□ -0.99
GAPVD1-203ENST00000312123 TRIM6-TRIM34B2RNG4 842 aa8.89□□□□□ -0.99
GAPVD1-203ENST00000312123 SMARCA4P51532 1647 aa8.88□□□□□ -0.99
GAPVD1-203ENST00000312123 CCDC7Q96M83 1385 aa8.88□□□□□ -0.99
GAPVD1-203ENST00000312123 CALD1Q05682 793 aaKnown RBP8.88□□□□□ -0.99
GAPVD1-203ENST00000312123 FAM161AQ3B820 660 aa8.88□□□□□ -0.99
GAPVD1-203ENST00000312123 CENPQQ7L2Z9 268 aaPredicted RBP8.88□□□□□ -0.99
GAPVD1-203ENST00000312123 CDCA7LQ96GN5 454 aa8.88□□□□□ -0.99
GAPVD1-203ENST00000312123 STK31Q9BXU1 1019 aa8.88□□□□□ -0.99
GAPVD1-203ENST00000312123 NPHP1O15259 732 aa8.87□□□□□ -0.99
GAPVD1-203ENST00000312123 RAD54L2Q9Y4B4 1467 aa8.87□□□□□ -0.99
GAPVD1-203ENST00000312123 FOXD4L6Q3SYB3 417 aaPredicted RBP8.87□□□□□ -0.99
GAPVD1-203ENST00000312123 FOXD4L3Q6VB84 417 aaPredicted RBP8.87□□□□□ -0.99
GAPVD1-203ENST00000312123 EIF3AQ14152 1382 aaKnown RBP8.87□□□□□ -0.99
GAPVD1-203ENST00000312123 MINK1Q8N4C8 1332 aaPredicted RBP8.86□□□□□ -0.99
GAPVD1-203ENST00000312123 GOLGA6L3A6NEY3 463 aa8.86□□□□□ -0.99
GAPVD1-203ENST00000312123 ANKRD45Q5TZF3 282 aa8.86□□□□□ -0.99
GAPVD1-203ENST00000312123 DRC7Q8IY82 874 aa8.86□□□□□ -0.99
GAPVD1-203ENST00000312123 CCDC184Q52MB2 194 aa8.86□□□□□ -0.99
GAPVD1-203ENST00000312123 FANCD2Q9BXW9 1451 aa8.86□□□□□ -0.99
GAPVD1-203ENST00000312123 FGD6Q6ZV73 1430 aa8.86□□□□□ -0.99
GAPVD1-203ENST00000312123 NGDNQ8NEJ9 315 aaKnown RBP8.86□□□□□ -0.99
GAPVD1-203ENST00000312123 KIF21BO75037 1637 aa8.85□□□□□ -0.99
GAPVD1-203ENST00000312123 FANCIQ9NVI1 1328 aa8.85□□□□□ -0.99
GAPVD1-203ENST00000312123 E9PSI1 815 aa8.85□□□□□ -0.99
GAPVD1-203ENST00000312123 CSB-PGBD3P0DP91 1061 aa8.84□□□□□ -0.99
GAPVD1-203ENST00000312123 AMPHP49418 695 aa8.84□□□□□ -0.99
GAPVD1-203ENST00000312123 ZKSCAN2Q63HK3 967 aa8.84□□□□□ -0.99
GAPVD1-203ENST00000312123 ARAP1Q96P48 1450 aa8.84□□□□□ -0.99
GAPVD1-203ENST00000312123 NBPF8Q3BBV2 869 aa8.84□□□□□ -1
GAPVD1-203ENST00000312123 ADAMTS8Q9UP79 889 aa8.84□□□□□ -1
GAPVD1-203ENST00000312123 FGD5Q6ZNL6 1462 aa8.83□□□□□ -1
GAPVD1-203ENST00000312123 PTPRGP23470 1445 aa8.83□□□□□ -1
GAPVD1-203ENST00000312123 CHMP3Q9Y3E7 222 aa8.83□□□□□ -1
GAPVD1-203ENST00000312123 PANK1Q8TE04 598 aa8.83□□□□□ -1
GAPVD1-203ENST00000312123 CGNL1Q0VF96 1302 aa8.83□□□□□ -1
GAPVD1-203ENST00000312123 HMMRO75330 724 aa8.83□□□□□ -1
GAPVD1-203ENST00000312123 NBPF1Q3BBV0 1214 aa8.83□□□□□ -1
GAPVD1-203ENST00000312123 AMER1Q5JTC6 1135 aaPredicted RBP8.83□□□□□ -1
GAPVD1-203ENST00000312123 GSE1Q14687 1217 aa8.82□□□□□ -1
GAPVD1-203ENST00000312123 UACAQ9BZF9 1416 aa8.82□□□□□ -1
GAPVD1-203ENST00000312123 CHAF1AQ13111 956 aaPredicted RBP8.82□□□□□ -1
GAPVD1-203ENST00000312123 CFAP44Q96MT7 982 aa8.82□□□□□ -1
GAPVD1-203ENST00000312123 TMEM132EQ6IEE7 984 aa8.82□□□□□ -1
GAPVD1-203ENST00000312123 MYOM3Q5VTT5 1437 aa8.82□□□□□ -1
GAPVD1-203ENST00000312123 NRDCO43847 1150 aa8.81□□□□□ -1
GAPVD1-203ENST00000312123 NECTIN2Q92692 538 aa8.81□□□□□ -1
GAPVD1-203ENST00000312123 LRRC9Q6ZRR7 1453 aa8.81□□□□□ -1
GAPVD1-203ENST00000312123 RILPL2Q969X0 211 aa8.81□□□□□ -1
GAPVD1-203ENST00000312123 CCDC9Q9Y3X0 531 aaKnown RBP8.81□□□□□ -1
GAPVD1-203ENST00000312123 LNPKQ9C0E8 428 aa8.81□□□□□ -1
GAPVD1-203ENST00000312123 DDX49Q9Y6V7 483 aaKnown RBP8.81□□□□□ -1
GAPVD1-203ENST00000312123 RIPK4P57078 832 aa8.8□□□□□ -1
GAPVD1-203ENST00000312123 GGNBP2Q9H3C7 697 aa8.8□□□□□ -1
GAPVD1-203ENST00000312123 USP35Q9P2H5 1018 aa8.8□□□□□ -1
GAPVD1-203ENST00000312123 VGFO15240 615 aaPredicted RBP8.8□□□□□ -1
GAPVD1-203ENST00000312123 KIAA2012Q0VF49 1180 aa8.8□□□□□ -1
GAPVD1-203ENST00000312123 CNTLNQ9NXG0 1405 aa8.79□□□□□ -1
GAPVD1-203ENST00000312123 EVC2Q86UK5 1308 aa8.79□□□□□ -1
GAPVD1-203ENST00000312123 GOLGA6L6A8MZA4 724 aa8.79□□□□□ -1
GAPVD1-203ENST00000312123 GNL2Q13823 731 aaKnown RBP8.79□□□□□ -1
GAPVD1-203ENST00000312123 AFAP1Q8N556 730 aa8.79□□□□□ -1
GAPVD1-203ENST00000312123 HMOX1P09601 288 aa8.79□□□□□ -1
GAPVD1-203ENST00000312123 LMOD3Q0VAK6 560 aa8.79□□□□□ -1
GAPVD1-203ENST00000312123 DZIP1LQ8IYY4 767 aaKnown RBP8.79□□□□□ -1
GAPVD1-203ENST00000312123 GAPVD1Q14C86 1478 aa8.79□□□□□ -1
GAPVD1-203ENST00000312123 GORABQ5T7V8 394 aa8.79□□□□□ -1
GAPVD1-203ENST00000312123 CFAP70Q5T0N1 1121 aa8.78□□□□□ -1
GAPVD1-203ENST00000312123 ISY1Q9ULR0 285 aaKnown RBP8.78□□□□□ -1
GAPVD1-203ENST00000312123 ST18O60284 1047 aa8.78□□□□□ -1
GAPVD1-203ENST00000312123 ANKRD50Q9ULJ7 1429 aa8.78□□□□□ -1
GAPVD1-203ENST00000312123 DIAPH1O60610 1272 aaKnown RBP8.78□□□□□ -1
GAPVD1-203ENST00000312123 COG3Q96JB2 828 aa8.78□□□□□ -1
GAPVD1-203ENST00000312123 AQRO60306 1485 aaKnown RBP eCLIP8.77□□□□□ -12e-6■■■■■ 28.9
GAPVD1-203ENST00000312123 CYB5RLQ6IPT4 315 aa8.77□□□□□ -1
GAPVD1-203ENST00000312123 EIF2S2P20042 333 aaKnown RBP8.77□□□□□ -1.01
GAPVD1-203ENST00000312123 MTHFSP49914 203 aa8.77□□□□□ -1.01
GAPVD1-203ENST00000312123 AKNAQ7Z591 1439 aa8.77□□□□□ -1.01
GAPVD1-203ENST00000312123 NCOA2Q15596 1464 aa8.77□□□□□ -1.01
GAPVD1-203ENST00000312123 NGEFQ8N5V2 710 aa8.76□□□□□ -1.01
GAPVD1-203ENST00000312123 SYAP1Q96A49 352 aaPredicted RBP8.76□□□□□ -1.01
GAPVD1-203ENST00000312123 CFTRP13569 1480 aa8.76□□□□□ -1.01
GAPVD1-203ENST00000312123 HSP90B1P14625 803 aaKnown RBP8.76□□□□□ -1.01
GAPVD1-203ENST00000312123 NFKBIBQ15653 356 aa8.76□□□□□ -1.01
GAPVD1-203ENST00000312123 TCP11L2Q8N4U5 519 aa8.76□□□□□ -1.01
GAPVD1-203ENST00000312123 CABP2Q9NPB3 220 aa8.76□□□□□ -1.01
GAPVD1-203ENST00000312123 EID1Q9Y6B2 187 aa8.76□□□□□ -1.01
GAPVD1-203ENST00000312123 RUNDC1Q96C34 613 aa8.76□□□□□ -1.01
GAPVD1-203ENST00000312123 DDX19BQ9UMR2 479 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms