RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 ANKRD30AQ9BXX3 1397 aa6.92□□□□□ -1.3
CAST-201ENST00000309190 NBPF1Q3BBV0 1214 aa6.92□□□□□ -1.3
CAST-201ENST00000309190 SUPT16HQ9Y5B9 1047 aaKnown RBP6.92□□□□□ -1.3
CAST-201ENST00000309190 HFM1A2PYH4 1435 aa6.91□□□□□ -1.3
CAST-201ENST00000309190 MBD5Q9P267 1494 aa6.91□□□□□ -1.3
CAST-201ENST00000309190 CARD11Q9BXL7 1154 aa6.91□□□□□ -1.3
CAST-201ENST00000309190 PPM1GO15355 546 aaPredicted RBP6.9□□□□□ -1.3
CAST-201ENST00000309190 FANCAO15360 1455 aa6.9□□□□□ -1.3
CAST-201ENST00000309190 GPATCH8Q9UKJ3 1502 aaKnown RBP6.9□□□□□ -1.3
CAST-201ENST00000309190 KIF14Q15058 1648 aa6.9□□□□□ -1.31
CAST-201ENST00000309190 HOMEZQ8IX15 550 aa6.9□□□□□ -1.31
CAST-201ENST00000309190 BCL11AQ9H165 835 aa6.9□□□□□ -1.31
CAST-201ENST00000309190 ADGRL1O94910 1474 aa6.89□□□□□ -1.31
CAST-201ENST00000309190 PLEKHH2Q8IVE3 1493 aa6.89□□□□□ -1.31
CAST-201ENST00000309190 CENPBP07199 599 aaPredicted RBP6.89□□□□□ -1.31
CAST-201ENST00000309190 CFAP70Q5T0N1 1121 aa6.89□□□□□ -1.31
CAST-201ENST00000309190 ADGBQ8N7X0 1667 aa6.89□□□□□ -1.31
CAST-201ENST00000309190 ANKRD50Q9ULJ7 1429 aa6.89□□□□□ -1.31
CAST-201ENST00000309190 EHBP1L1Q8N3D4 1523 aa6.89□□□□□ -1.31
CAST-201ENST00000309190 A0A0G2JS52 829 aa6.89□□□□□ -1.31
CAST-201ENST00000309190 XPCQ01831 940 aaPredicted RBP6.89□□□□□ -1.31
CAST-201ENST00000309190 YEATS2Q9ULM3 1422 aa6.88□□□□□ -1.31
CAST-201ENST00000309190 DNMT1P26358 1616 aaKnown RBP6.88□□□□□ -1.31
CAST-201ENST00000309190 ABCC5O15440 1437 aa6.88□□□□□ -1.31
CAST-201ENST00000309190 MYT1Q01538 1121 aa6.88□□□□□ -1.31
CAST-201ENST00000309190 IDI1Q13907 227 aa6.88□□□□□ -1.31
CAST-201ENST00000309190 NUTM2GQ5VZR2 741 aa6.88□□□□□ -1.31
CAST-201ENST00000309190 C9orf84Q5VXU9 1444 aa6.88□□□□□ -1.31
CAST-201ENST00000309190 BCORL1Q5H9F3 1711 aa6.88□□□□□ -1.31
CAST-201ENST00000309190 TEX14Q8IWB6 1497 aa6.87□□□□□ -1.31
CAST-201ENST00000309190 POGKQ9P215 609 aa6.87□□□□□ -1.31
CAST-201ENST00000309190 ABCC2Q92887 1545 aa6.87□□□□□ -1.31
CAST-201ENST00000309190 NAIPQ13075 1403 aa6.87□□□□□ -1.31
CAST-201ENST00000309190 NBPF8Q3BBV2 869 aa6.87□□□□□ -1.31
CAST-201ENST00000309190 RAPGEF6Q8TEU7 1601 aa6.87□□□□□ -1.31
CAST-201ENST00000309190 MINK1Q8N4C8 1332 aaPredicted RBP6.87□□□□□ -1.31
CAST-201ENST00000309190 TSHZ2Q9NRE2 1034 aa6.87□□□□□ -1.31
CAST-201ENST00000309190 SPATA31E1Q6ZUB1 1445 aa6.86□□□□□ -1.31
CAST-201ENST00000309190 WDR7Q9Y4E6 1490 aa6.86□□□□□ -1.31
CAST-201ENST00000309190 TXNDC2Q86VQ3 553 aa6.86□□□□□ -1.31
CAST-201ENST00000309190 CC2D1BQ5T0F9 858 aaKnown RBP6.86□□□□□ -1.31
CAST-201ENST00000309190 CDC42BPAQ5VT25 1732 aa6.86□□□□□ -1.31
CAST-201ENST00000309190 GOLGB1Q14789 3259 aaKnown RBP6.86□□□□□ -1.31
CAST-201ENST00000309190 CAMSAP2Q08AD1 1489 aa6.86□□□□□ -1.31
CAST-201ENST00000309190 ST20-MTHFSA0A0A6YYL1 179 aa6.85□□□□□ -1.31
CAST-201ENST00000309190 PPP4R3CPQ6ZMV5 832 aa6.85□□□□□ -1.31
CAST-201ENST00000309190 SYCP2Q9BX26 1530 aa6.85□□□□□ -1.31
CAST-201ENST00000309190 WAPLQ7Z5K2 1190 aa6.85□□□□□ -1.31
CAST-201ENST00000309190 DAPK1P53355 1430 aa6.85□□□□□ -1.31
CAST-201ENST00000309190 FAM9BQ8IZU0 186 aa6.85□□□□□ -1.31
CAST-201ENST00000309190 FBLN1P23142 703 aa6.84□□□□□ -1.31
CAST-201ENST00000309190 KLHL34Q8N239 644 aa6.84□□□□□ -1.31
CAST-201ENST00000309190 PAK3O75914 559 aaPredicted RBP6.84□□□□□ -1.31
CAST-201ENST00000309190 SRPK2P78362 688 aaKnown RBP6.84□□□□□ -1.31
CAST-201ENST00000309190 HSPA5P11021 654 aaKnown RBP6.84□□□□□ -1.31
CAST-201ENST00000309190 NCKAP5LQ9HCH0 1330 aa6.84□□□□□ -1.32
CAST-201ENST00000309190 PIP4K2BP78356 416 aa6.84□□□□□ -1.32
CAST-201ENST00000309190 COL17A1Q9UMD9 1497 aaPredicted RBP6.83□□□□□ -1.32
CAST-201ENST00000309190 KDM5CP41229 1560 aa6.83□□□□□ -1.32
CAST-201ENST00000309190 MIA2Q96PC5 1412 aa6.83□□□□□ -1.32
CAST-201ENST00000309190 KANK1Q14678 1352 aa6.83□□□□□ -1.32
CAST-201ENST00000309190 CLASP1Q7Z460 1538 aa6.83□□□□□ -1.32
CAST-201ENST00000309190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.83□□□□□ -1.32
CAST-201ENST00000309190 PMFBP1Q8TBY8 1022 aa6.82□□□□□ -1.32
CAST-201ENST00000309190 PLCH2O75038 1416 aa6.82□□□□□ -1.32
CAST-201ENST00000309190 NCOA1Q15788 1441 aa6.82□□□□□ -1.32
CAST-201ENST00000309190 KDM5DQ9BY66 1539 aa6.82□□□□□ -1.32
CAST-201ENST00000309190 ARHGEF12Q9NZN5 1544 aa6.82□□□□□ -1.32
CAST-201ENST00000309190 ADGRF5Q8IZF2 1346 aa6.81□□□□□ -1.32
CAST-201ENST00000309190 NEUROD2Q15784 382 aa6.81□□□□□ -1.32
CAST-201ENST00000309190 EIF4G2P78344 907 aaKnown RBP eCLIP6.81□□□□□ -1.32
CAST-201ENST00000309190 FBXO41Q8TF61 875 aa6.81□□□□□ -1.32
CAST-201ENST00000309190 DDX17Q92841 729 aaKnown RBP6.81□□□□□ -1.32
CAST-201ENST00000309190 RSPH4AQ5TD94 716 aa6.8□□□□□ -1.32
CAST-201ENST00000309190 CABP2Q9NPB3 220 aa6.8□□□□□ -1.32
CAST-201ENST00000309190 LAMC1P11047 1609 aa6.8□□□□□ -1.32
CAST-201ENST00000309190 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.8□□□□□ -1.32
CAST-201ENST00000309190 TTC37Q6PGP7 1564 aa6.8□□□□□ -1.32
CAST-201ENST00000309190 C11orf95C9JLR9 678 aaPredicted RBP6.79□□□□□ -1.32
CAST-201ENST00000309190 CCDC144AA2RUR9 1427 aa6.79□□□□□ -1.32
CAST-201ENST00000309190 LTV1Q96GA3 475 aaPredicted RBP6.79□□□□□ -1.32
CAST-201ENST00000309190 LMTK3Q96Q04 1460 aa6.78□□□□□ -1.32
CAST-201ENST00000309190 ROCK2O75116 1388 aaKnown RBP6.78□□□□□ -1.32
CAST-201ENST00000309190 ILDR2Q71H61 639 aa6.77□□□□□ -1.33
CAST-201ENST00000309190 USP35Q9P2H5 1018 aa6.77□□□□□ -1.33
CAST-201ENST00000309190 EID1Q9Y6B2 187 aa6.77□□□□□ -1.33
CAST-201ENST00000309190 ADGRL2O95490 1459 aa6.77□□□□□ -1.33
CAST-201ENST00000309190 ABCA8O94911 1581 aa6.77□□□□□ -1.33
CAST-201ENST00000309190 KIF13AQ9H1H9 1805 aa6.77□□□□□ -1.33
CAST-201ENST00000309190 ITSN2Q9NZM3 1697 aa6.77□□□□□ -1.33
CAST-201ENST00000309190 ZCCHC11Q5TAX3 1644 aaKnown RBP6.77□□□□□ -1.33
CAST-201ENST00000309190 PRAM1Q96QH2 718 aa6.77□□□□□ -1.33
CAST-201ENST00000309190 MYO5CQ9NQX4 1742 aa6.77□□□□□ -1.33
CAST-201ENST00000309190 RNF17Q9BXT8 1623 aaKnown RBP6.77□□□□□ -1.33
CAST-201ENST00000309190 CCDC141Q6ZP82 1450 aa6.76□□□□□ -1.33
CAST-201ENST00000309190 CCER2I3L3R5 266 aa6.76□□□□□ -1.33
CAST-201ENST00000309190 LTKP29376 864 aa6.76□□□□□ -1.33
CAST-201ENST00000309190 HECW2Q9P2P5 1572 aa6.76□□□□□ -1.33
CAST-201ENST00000309190 RPRD2Q5VT52 1461 aaKnown RBP6.76□□□□□ -1.33
CAST-201ENST00000309190 VIRMAQ69YN4 1812 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms