RNA–Protein interactions for RNA: ENST00000308783.9

KDM2A-201, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-201ENST00000308783 ABCC1P33527 1531 aa14.47□□□□□ -0.09
KDM2A-201ENST00000308783 PLEKHH2Q8IVE3 1493 aa14.47□□□□□ -0.09
KDM2A-201ENST00000308783 RPRD2Q5VT52 1461 aaKnown RBP14.47□□□□□ -0.09
KDM2A-201ENST00000308783 FANCAO15360 1455 aa14.46□□□□□ -0.09
KDM2A-201ENST00000308783 NBPF8Q3BBV2 869 aa14.46□□□□□ -0.09
KDM2A-201ENST00000308783 DDX10Q13206 875 aaKnown RBP14.46□□□□□ -0.1
KDM2A-201ENST00000308783 GLIPR1L2Q4G1C9 344 aa14.44□□□□□ -0.1
KDM2A-201ENST00000308783 MYT1LQ9UL68 1186 aa14.44□□□□□ -0.1
KDM2A-201ENST00000308783 SPAG9O60271 1321 aaKnown RBP14.44□□□□□ -0.1
KDM2A-201ENST00000308783 ABCA9Q8IUA7 1624 aa14.44□□□□□ -0.1
KDM2A-201ENST00000308783 KLHL34Q8N239 644 aa14.43□□□□□ -0.1
KDM2A-201ENST00000308783 TEX14Q8IWB6 1497 aa14.43□□□□□ -0.1
KDM2A-201ENST00000308783 MAST1Q9Y2H9 1570 aa14.42□□□□□ -0.1
KDM2A-201ENST00000308783 ZNF326Q5BKZ1 582 aaKnown RBP14.42□□□□□ -0.1
KDM2A-201ENST00000308783 SCAPERQ9BY12 1400 aa14.42□□□□□ -0.1
KDM2A-201ENST00000308783 MSH5O43196 834 aa14.42□□□□□ -0.1
KDM2A-201ENST00000308783 PDIA4P13667 645 aaKnown RBP14.42□□□□□ -0.1
KDM2A-201ENST00000308783 FAM135AQ9P2D6 1515 aa14.41□□□□□ -0.1
KDM2A-201ENST00000308783 ADGRL1O94910 1474 aa14.4□□□□□ -0.1
KDM2A-201ENST00000308783 PLXNC1O60486 1568 aa14.39□□□□□ -0.11
KDM2A-201ENST00000308783 KDM5DQ9BY66 1539 aa14.38□□□□□ -0.11
KDM2A-201ENST00000308783 HSPA5P11021 654 aaKnown RBP14.38□□□□□ -0.11
KDM2A-201ENST00000308783 ZMYND15Q9H091 742 aa14.38□□□□□ -0.11
KDM2A-201ENST00000308783 CD109Q6YHK3 1445 aa14.38□□□□□ -0.11
KDM2A-201ENST00000308783 BCL11BQ9C0K0 894 aaPredicted RBP14.38□□□□□ -0.11
KDM2A-201ENST00000308783 ARAP3Q8WWN8 1544 aa14.38□□□□□ -0.11
KDM2A-201ENST00000308783 KDM2AQ9Y2K7 1162 aa14.37□□□□□ -0.11
KDM2A-201ENST00000308783 DUOX2Q9NRD8 1548 aa14.37□□□□□ -0.11
KDM2A-201ENST00000308783 ZFYVE16Q7Z3T8 1539 aa14.37□□□□□ -0.11
KDM2A-201ENST00000308783 RIMBP3CA6NJZ7 1639 aa14.35□□□□□ -0.11
KDM2A-201ENST00000308783 RIMBP3BA6NNM3 1639 aa14.35□□□□□ -0.11
KDM2A-201ENST00000308783 RIMBP3Q9UFD9 1639 aa14.35□□□□□ -0.11
KDM2A-201ENST00000308783 RGL3Q3MIN7 710 aa14.35□□□□□ -0.11
KDM2A-201ENST00000308783 UNC13BO14795 1591 aa14.34□□□□□ -0.11
KDM2A-201ENST00000308783 RAPGEF3O95398 923 aa14.34□□□□□ -0.11
KDM2A-201ENST00000308783 PLA2R1Q13018 1463 aa14.34□□□□□ -0.11
KDM2A-201ENST00000308783 SENP3-EIF4A1A0A087X0R7 540 aa14.33□□□□□ -0.12
KDM2A-201ENST00000308783 C11orf95C9JLR9 678 aaPredicted RBP14.33□□□□□ -0.12
KDM2A-201ENST00000308783 ERBINQ96RT1 1412 aa14.33□□□□□ -0.12
KDM2A-201ENST00000308783 KIF3BO15066 747 aa14.33□□□□□ -0.12
KDM2A-201ENST00000308783 RTL5Q5HYW3 569 aaPredicted RBP14.33□□□□□ -0.12
KDM2A-201ENST00000308783 ATP7AQ04656 1500 aa14.33□□□□□ -0.12
KDM2A-201ENST00000308783 DCAF11Q8TEB1 546 aa14.33□□□□□ -0.12
KDM2A-201ENST00000308783 EIF4G2P78344 907 aaKnown RBP eCLIP14.32□□□□□ -0.12
KDM2A-201ENST00000308783 RTEL1-TNFRSF6BF6WH68 1400 aa14.31□□□□□ -0.12
KDM2A-201ENST00000308783 WASHC2AQ641Q2 1341 aa14.31□□□□□ -0.12
KDM2A-201ENST00000308783 INO80Q9ULG1 1556 aaPredicted RBP14.3□□□□□ -0.12
KDM2A-201ENST00000308783 IQGAP3Q86VI3 1631 aa14.29□□□□□ -0.12
KDM2A-201ENST00000308783 CCDC144AA2RUR9 1427 aa14.29□□□□□ -0.12
KDM2A-201ENST00000308783 MAGI2Q86UL8 1455 aa14.28□□□□□ -0.12
KDM2A-201ENST00000308783 FKBP8Q14318 412 aa14.28□□□□□ -0.12
KDM2A-201ENST00000308783 KIDINS220Q9ULH0 1771 aa14.27□□□□□ -0.12
KDM2A-201ENST00000308783 FAM69CQ0P6D2 419 aa14.27□□□□□ -0.13
KDM2A-201ENST00000308783 ZNF518AQ6AHZ1 1483 aa14.26□□□□□ -0.13
KDM2A-201ENST00000308783 DHX29Q7Z478 1369 aaKnown RBP14.25□□□□□ -0.13
KDM2A-201ENST00000308783 POGZQ7Z3K3 1410 aa14.25□□□□□ -0.13
KDM2A-201ENST00000308783 SPATA31E1Q6ZUB1 1445 aa14.24□□□□□ -0.13
KDM2A-201ENST00000308783 GGT6Q6P531 493 aa14.23□□□□□ -0.13
KDM2A-201ENST00000308783 RBM10P98175 930 aaKnown RBP14.22□□□□□ -0.13
KDM2A-201ENST00000308783 E9PCH4 1651 aa14.22□□□□□ -0.13
KDM2A-201ENST00000308783 NBPF1Q3BBV0 1214 aa14.21□□□□□ -0.13
KDM2A-201ENST00000308783 CARD11Q9BXL7 1154 aa14.21□□□□□ -0.13
KDM2A-201ENST00000308783 FGD1P98174 961 aa14.21□□□□□ -0.13
KDM2A-201ENST00000308783 POLR3GLQ9BT43 218 aa14.21□□□□□ -0.13
KDM2A-201ENST00000308783 USP47Q96K76 1375 aa14.21□□□□□ -0.13
KDM2A-201ENST00000308783 A2MP01023 1474 aa14.2□□□□□ -0.14
KDM2A-201ENST00000308783 DEPDC5O75140 1603 aa14.2□□□□□ -0.14
KDM2A-201ENST00000308783 MROH1Q8NDA8 1641 aa14.2□□□□□ -0.14
KDM2A-201ENST00000308783 ATP10AO60312 1499 aa14.2□□□□□ -0.14
KDM2A-201ENST00000308783 UHRF1BP1Q6BDS2 1440 aa14.2□□□□□ -0.14
KDM2A-201ENST00000308783 KDM5CP41229 1560 aa14.19□□□□□ -0.14
KDM2A-201ENST00000308783 KIF7Q2M1P5 1343 aa14.19□□□□□ -0.14
KDM2A-201ENST00000308783 TSPOAP1O95153 1857 aa14.19□□□□□ -0.14
KDM2A-201ENST00000308783 MAP3K4Q9Y6R4 1608 aa14.19□□□□□ -0.14
KDM2A-201ENST00000308783 CCDC7Q96M83 1385 aa14.18□□□□□ -0.14
KDM2A-201ENST00000308783 FRMPD1Q5SYB0 1578 aa14.18□□□□□ -0.14
KDM2A-201ENST00000308783 ANP32CO43423 234 aa14.18□□□□□ -0.14
KDM2A-201ENST00000308783 CFAP74Q9C0B2 1584 aa14.17□□□□□ -0.14
KDM2A-201ENST00000308783 KANK1Q14678 1352 aa14.17□□□□□ -0.14
KDM2A-201ENST00000308783 UGGT1Q9NYU2 1555 aa14.17□□□□□ -0.14
KDM2A-201ENST00000308783 NEO1Q92859 1461 aa14.17□□□□□ -0.14
KDM2A-201ENST00000308783 MLH3Q9UHC1 1453 aa14.17□□□□□ -0.14
KDM2A-201ENST00000308783 ABCA6Q8N139 1617 aa14.17□□□□□ -0.14
KDM2A-201ENST00000308783 YEATS2Q9ULM3 1422 aa14.17□□□□□ -0.14
KDM2A-201ENST00000308783 HECW2Q9P2P5 1572 aa14.17□□□□□ -0.14
KDM2A-201ENST00000308783 ST20-MTHFSA0A0A6YYL1 179 aa14.17□□□□□ -0.14
KDM2A-201ENST00000308783 ROCK2O75116 1388 aaKnown RBP14.16□□□□□ -0.14
KDM2A-201ENST00000308783 PRAG1Q86YV5 1406 aa14.16□□□□□ -0.14
KDM2A-201ENST00000308783 RALGAPBQ86X10 1494 aa14.16□□□□□ -0.14
KDM2A-201ENST00000308783 BCORL1Q5H9F3 1711 aa14.16□□□□□ -0.14
KDM2A-201ENST00000308783 VWDEQ8N2E2 1590 aa14.16□□□□□ -0.14
KDM2A-201ENST00000308783 CFAP65Q6ZU64 1925 aaKnown RBP14.15□□□□□ -0.14
KDM2A-201ENST00000308783 DIP2BQ9P265 1576 aa14.15□□□□□ -0.14
KDM2A-201ENST00000308783 PRDM15P57071 1507 aaPredicted RBP14.15□□□□□ -0.14
KDM2A-201ENST00000308783 TET3O43151 1660 aa14.13□□□□□ -0.15
KDM2A-201ENST00000308783 CLTCL1P53675 1640 aa14.13□□□□□ -0.15
KDM2A-201ENST00000308783 EIF2AK4Q9P2K8 1649 aaKnown RBP14.13□□□□□ -0.15
KDM2A-201ENST00000308783 PTPRTO14522 1441 aa14.13□□□□□ -0.15
KDM2A-201ENST00000308783 CEP152O94986 1710 aa14.13□□□□□ -0.15
KDM2A-201ENST00000308783 SPHKAPQ2M3C7 1700 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms