RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 KIF15Q9NS87 1388 aa22.97■■□□□ 1.27
ATP2A2-201ENST00000308664 CSB-PGBD3P0DP91 1061 aa22.97■■□□□ 1.27
ATP2A2-201ENST00000308664 KIF21BO75037 1637 aa22.97■■□□□ 1.27
ATP2A2-201ENST00000308664 FAM69CQ0P6D2 419 aa22.97■■□□□ 1.27
ATP2A2-201ENST00000308664 AFAP1Q8N556 730 aa22.97■■□□□ 1.27
ATP2A2-201ENST00000308664 ZNF330Q9Y3S2 320 aaPredicted RBP22.96■■□□□ 1.27
ATP2A2-201ENST00000308664 EID1Q9Y6B2 187 aa22.96■■□□□ 1.27
ATP2A2-201ENST00000308664 PHLDB1Q86UU1 1377 aa22.96■■□□□ 1.27
ATP2A2-201ENST00000308664 PANK3Q9H999 370 aa22.96■■□□□ 1.27
ATP2A2-201ENST00000308664 CCDC144AA2RUR9 1427 aa22.96■■□□□ 1.27
ATP2A2-201ENST00000308664 RSPH6AQ9H0K4 717 aa22.96■■□□□ 1.27
ATP2A2-201ENST00000308664 KIF7Q2M1P5 1343 aa22.94■■□□□ 1.26
ATP2A2-201ENST00000308664 ITPRIPQ8IWB1 547 aa22.94■■□□□ 1.26
ATP2A2-201ENST00000308664 RRP7AQ9Y3A4 280 aaKnown RBP22.94■■□□□ 1.26
ATP2A2-201ENST00000308664 FOXD4L1Q9NU39 408 aa22.94■■□□□ 1.26
ATP2A2-201ENST00000308664 CCDC7Q96M83 1385 aa22.93■■□□□ 1.26
ATP2A2-201ENST00000308664 NFKBIBQ15653 356 aa22.93■■□□□ 1.26
ATP2A2-201ENST00000308664 CHMP4BQ9H444 224 aaKnown RBP22.92■■□□□ 1.26
ATP2A2-201ENST00000308664 PMFBP1Q8TBY8 1022 aa22.92■■□□□ 1.26
ATP2A2-201ENST00000308664 TERF2IPQ9NYB0 399 aa22.92■■□□□ 1.26
ATP2A2-201ENST00000308664 USP47Q96K76 1375 aa22.91■■□□□ 1.26
ATP2A2-201ENST00000308664 HSP90AA2PQ14568 343 aaPredicted RBP22.91■■□□□ 1.26
ATP2A2-201ENST00000308664 MINK1Q8N4C8 1332 aaPredicted RBP22.91■■□□□ 1.26
ATP2A2-201ENST00000308664 CCDC184Q52MB2 194 aa22.9■■□□□ 1.26
ATP2A2-201ENST00000308664 CENPJQ9HC77 1338 aaPredicted RBP22.9■■□□□ 1.26
ATP2A2-201ENST00000308664 VSIG10Q8N0Z9 540 aa22.9■■□□□ 1.26
ATP2A2-201ENST00000308664 BRPF3Q9ULD4 1205 aa22.9■■□□□ 1.26
ATP2A2-201ENST00000308664 BCL2L13Q9BXK5 485 aa22.88■■□□□ 1.25
ATP2A2-201ENST00000308664 ELL2O00472 640 aaPredicted RBP22.85■■□□□ 1.25
ATP2A2-201ENST00000308664 COG6Q9Y2V7 657 aa22.85■■□□□ 1.25
ATP2A2-201ENST00000308664 CNTLNQ9NXG0 1405 aa22.85■■□□□ 1.25
ATP2A2-201ENST00000308664 SMC4Q9NTJ3 1288 aa22.84■■□□□ 1.25
ATP2A2-201ENST00000308664 IPO8O15397 1037 aaKnown RBP22.83■■□□□ 1.25
ATP2A2-201ENST00000308664 VGFO15240 615 aaPredicted RBP22.82■■□□□ 1.24
ATP2A2-201ENST00000308664 AMPHP49418 695 aa22.82■■□□□ 1.24
ATP2A2-201ENST00000308664 EIF3AQ14152 1382 aaKnown RBP22.82■■□□□ 1.24
ATP2A2-201ENST00000308664 FGD6Q6ZV73 1430 aa22.82■■□□□ 1.24
ATP2A2-201ENST00000308664 KCNJ4P48050 445 aa22.82■■□□□ 1.24
ATP2A2-201ENST00000308664 ZRSR1Q15695 479 aaKnown RBP22.82■■□□□ 1.24
ATP2A2-201ENST00000308664 CFTRP13569 1480 aa22.81■■□□□ 1.24
ATP2A2-201ENST00000308664 AKNAQ7Z591 1439 aa22.81■■□□□ 1.24
ATP2A2-201ENST00000308664 ARAP1Q96P48 1450 aa22.81■■□□□ 1.24
ATP2A2-201ENST00000308664 CDCA7LQ96GN5 454 aa22.79■■□□□ 1.24
ATP2A2-201ENST00000308664 APAF1O14727 1248 aa22.79■■□□□ 1.24
ATP2A2-201ENST00000308664 CHAF1AQ13111 956 aaPredicted RBP22.79■■□□□ 1.24
ATP2A2-201ENST00000308664 TMEM132EQ6IEE7 984 aa22.78■■□□□ 1.24
ATP2A2-201ENST00000308664 CCDC9Q9Y3X0 531 aaKnown RBP22.78■■□□□ 1.24
ATP2A2-201ENST00000308664 UACAQ9BZF9 1416 aa22.78■■□□□ 1.24
ATP2A2-201ENST00000308664 RRBP1Q9P2E9 1410 aaKnown RBP22.78■■□□□ 1.24
ATP2A2-201ENST00000308664 CALD1Q05682 793 aaKnown RBP22.78■■□□□ 1.24
ATP2A2-201ENST00000308664 SYNJ1O43426 1573 aa22.78■■□□□ 1.24
ATP2A2-201ENST00000308664 FGD1P98174 961 aa22.77■■□□□ 1.24
ATP2A2-201ENST00000308664 NAP1L2Q9ULW6 460 aaPredicted RBP22.77■■□□□ 1.24
ATP2A2-201ENST00000308664 MYOM3Q5VTT5 1437 aa22.77■■□□□ 1.24
ATP2A2-201ENST00000308664 SLC4A10Q6U841 1118 aa22.75■■□□□ 1.23
ATP2A2-201ENST00000308664 FRAT2O75474 233 aaPredicted RBP22.74■■□□□ 1.23
ATP2A2-201ENST00000308664 PTMSP20962 102 aa22.74■■□□□ 1.23
ATP2A2-201ENST00000308664 AMER1Q5JTC6 1135 aaPredicted RBP22.74■■□□□ 1.23
ATP2A2-201ENST00000308664 GOLGA6L4A6NEF3 574 aa22.74■■□□□ 1.23
ATP2A2-201ENST00000308664 LRRC9Q6ZRR7 1453 aa22.73■■□□□ 1.23
ATP2A2-201ENST00000308664 KIAA2012Q0VF49 1180 aa22.73■■□□□ 1.23
ATP2A2-201ENST00000308664 CGNL1Q0VF96 1302 aa22.72■■□□□ 1.23
ATP2A2-201ENST00000308664 CDK11BP21127 795 aaKnown RBP22.72■■□□□ 1.23
ATP2A2-201ENST00000308664 DDX11L8A8MPP1 907 aa22.71■■□□□ 1.23
ATP2A2-201ENST00000308664 GRIN2BQ13224 1484 aa22.71■■□□□ 1.23
ATP2A2-201ENST00000308664 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
ATP2A2-201ENST00000308664 MCCP23508 829 aa22.7■■□□□ 1.22
ATP2A2-201ENST00000308664 DDX49Q9Y6V7 483 aaKnown RBP22.7■■□□□ 1.22
ATP2A2-201ENST00000308664 PRG4Q92954 1404 aaPredicted RBP22.7■■□□□ 1.22
ATP2A2-201ENST00000308664 BACH2Q9BYV9 841 aa22.7■■□□□ 1.22
ATP2A2-201ENST00000308664 ANKRD50Q9ULJ7 1429 aa22.69■■□□□ 1.22
ATP2A2-201ENST00000308664 DRC7Q8IY82 874 aa22.69■■□□□ 1.22
ATP2A2-201ENST00000308664 E9PSI1 815 aa22.69■■□□□ 1.22
ATP2A2-201ENST00000308664 FOXD4L5Q5VV16 416 aaPredicted RBP22.68■■□□□ 1.22
ATP2A2-201ENST00000308664 FOXD4L4Q8WXT5 416 aaPredicted RBP22.68■■□□□ 1.22
ATP2A2-201ENST00000308664 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
ATP2A2-201ENST00000308664 NCOA2Q15596 1464 aa22.68■■□□□ 1.22
ATP2A2-201ENST00000308664 CC2D2AQ9P2K1 1620 aa22.68■■□□□ 1.22
ATP2A2-201ENST00000308664 STK31Q9BXU1 1019 aa22.67■■□□□ 1.22
ATP2A2-201ENST00000308664 EVC2Q86UK5 1308 aa22.66■■□□□ 1.22
ATP2A2-201ENST00000308664 TULP1O00294 542 aaPredicted RBP22.66■■□□□ 1.22
ATP2A2-201ENST00000308664 NOL8Q76FK4 1167 aaKnown RBP22.66■■□□□ 1.22
ATP2A2-201ENST00000308664 CFAP70Q5T0N1 1121 aa22.65■■□□□ 1.22
ATP2A2-201ENST00000308664 POLA1P09884 1462 aaPredicted RBP22.65■■□□□ 1.22
ATP2A2-201ENST00000308664 CFAP44Q96MT7 982 aa22.65■■□□□ 1.22
ATP2A2-201ENST00000308664 NBPF8Q3BBV2 869 aa22.64■■□□□ 1.22
ATP2A2-201ENST00000308664 COG3Q96JB2 828 aa22.63■■□□□ 1.21
ATP2A2-201ENST00000308664 TOPBP1Q92547 1522 aa22.63■■□□□ 1.21
ATP2A2-201ENST00000308664 RAPGEF3O95398 923 aa22.63■■□□□ 1.21
ATP2A2-201ENST00000308664 PRKCSHP14314 528 aaPredicted RBP22.62■■□□□ 1.21
ATP2A2-201ENST00000308664 CHMP5Q9NZZ3 219 aa22.62■■□□□ 1.21
ATP2A2-201ENST00000308664 CASKIN1Q8WXD9 1431 aa22.62■■□□□ 1.21
ATP2A2-201ENST00000308664 NBPF1Q3BBV0 1214 aa22.62■■□□□ 1.21
ATP2A2-201ENST00000308664 PNISRQ8TF01 805 aaKnown RBP22.62■■□□□ 1.21
ATP2A2-201ENST00000308664 CHMP3Q9Y3E7 222 aa22.61■■□□□ 1.21
ATP2A2-201ENST00000308664 CUX1P39880 1505 aa22.61■■□□□ 1.21
ATP2A2-201ENST00000308664 ADAMTS8Q9UP79 889 aa22.6■■□□□ 1.21
ATP2A2-201ENST00000308664 GGNBP2Q9H3C7 697 aa22.6■■□□□ 1.21
ATP2A2-201ENST00000308664 NUTM2GQ5VZR2 741 aa22.59■■□□□ 1.21
ATP2A2-201ENST00000308664 PANK1Q8TE04 598 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms