RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 ADGBQ8N7X0 1667 aa22.14■■□□□ 1.14
SSH3-201ENST00000308127 ADGRL2O95490 1459 aa22.13■■□□□ 1.13
SSH3-201ENST00000308127 EIF4G3O43432 1585 aaKnown RBP22.13■■□□□ 1.13
SSH3-201ENST00000308127 LRPPRCP42704 1394 aaKnown RBP22.13■■□□□ 1.13
SSH3-201ENST00000308127 RALBP1Q15311 655 aa22.12■■□□□ 1.13
SSH3-201ENST00000308127 CEP170Q5SW79 1584 aa22.12■■□□□ 1.13
SSH3-201ENST00000308127 ARID4BQ4LE39 1312 aaPredicted RBP22.12■■□□□ 1.13
SSH3-201ENST00000308127 BRD4O60885 1362 aaPredicted RBP22.11■■□□□ 1.13
SSH3-201ENST00000308127 ITSN2Q9NZM3 1697 aa22.11■■□□□ 1.13
SSH3-201ENST00000308127 UHRF1BP1Q6BDS2 1440 aa22.1■■□□□ 1.13
SSH3-201ENST00000308127 NLRP13Q86W25 1043 aa22.09■■□□□ 1.13
SSH3-201ENST00000308127 RTL5Q5HYW3 569 aaPredicted RBP22.09■■□□□ 1.13
SSH3-201ENST00000308127 KTN1Q86UP2 1357 aaKnown RBP22.08■■□□□ 1.13
SSH3-201ENST00000308127 PANK3Q9H999 370 aa22.07■■□□□ 1.12
SSH3-201ENST00000308127 CROCC2H7BZ55 1655 aa22.07■■□□□ 1.12
SSH3-201ENST00000308127 PDE4AP27815 886 aa22.07■■□□□ 1.12
SSH3-201ENST00000308127 CARMIL2Q6F5E8 1435 aa22.06■■□□□ 1.12
SSH3-201ENST00000308127 ATP10BO94823 1461 aa22.06■■□□□ 1.12
SSH3-201ENST00000308127 DISP3Q9P2K9 1392 aa22.05■■□□□ 1.12
SSH3-201ENST00000308127 MAGI1Q96QZ7 1491 aaPredicted RBP22.05■■□□□ 1.12
SSH3-201ENST00000308127 C20orf194Q5TEA3 1177 aa22.05■■□□□ 1.12
SSH3-201ENST00000308127 CRBNQ96SW2 442 aa22.05■■□□□ 1.12
SSH3-201ENST00000308127 PER1O15534 1290 aaPredicted RBP22.04■■□□□ 1.12
SSH3-201ENST00000308127 CDC42BPAQ5VT25 1732 aa22.04■■□□□ 1.12
SSH3-201ENST00000308127 ERCC6Q03468 1493 aa22.02■■□□□ 1.12
SSH3-201ENST00000308127 CCDC144AA2RUR9 1427 aa22.01■■□□□ 1.11
SSH3-201ENST00000308127 ABCC10Q5T3U5 1492 aa22■■□□□ 1.11
SSH3-201ENST00000308127 PARD3Q8TEW0 1356 aa21.99■■□□□ 1.11
SSH3-201ENST00000308127 SLC4A3P48751 1232 aa21.98■■□□□ 1.11
SSH3-201ENST00000308127 MYT1LQ9UL68 1186 aa21.98■■□□□ 1.11
SSH3-201ENST00000308127 SYNJ2O15056 1496 aa21.98■■□□□ 1.11
SSH3-201ENST00000308127 PRAG1Q86YV5 1406 aa21.97■■□□□ 1.11
SSH3-201ENST00000308127 TESK2Q96S53 571 aa21.97■■□□□ 1.11
SSH3-201ENST00000308127 ARHGEF12Q9NZN5 1544 aa21.97■■□□□ 1.11
SSH3-201ENST00000308127 ADAMTS8Q9UP79 889 aa21.97■■□□□ 1.11
SSH3-201ENST00000308127 TCERG1O14776 1098 aaKnown RBP21.96■■□□□ 1.11
SSH3-201ENST00000308127 BACH2Q9BYV9 841 aa21.96■■□□□ 1.11
SSH3-201ENST00000308127 FAM135AQ9P2D6 1515 aa21.96■■□□□ 1.11
SSH3-201ENST00000308127 RTN4Q9NQC3 1192 aaKnown RBP21.96■■□□□ 1.11
SSH3-201ENST00000308127 ADCY10Q96PN6 1610 aa21.96■■□□□ 1.11
SSH3-201ENST00000308127 NEFMP07197 916 aa21.95■■□□□ 1.1
SSH3-201ENST00000308127 KDM5DQ9BY66 1539 aa21.94■■□□□ 1.1
SSH3-201ENST00000308127 PLA2R1Q13018 1463 aa21.92■■□□□ 1.1
SSH3-201ENST00000308127 A2MP01023 1474 aa21.91■■□□□ 1.1
SSH3-201ENST00000308127 SHANK2Q9UPX8 1470 aa21.9■■□□□ 1.1
SSH3-201ENST00000308127 ABCA8O94911 1581 aa21.9■■□□□ 1.1
SSH3-201ENST00000308127 PTPRGP23470 1445 aa21.9■■□□□ 1.1
SSH3-201ENST00000308127 CCDC146Q8IYE0 955 aa21.89■■□□□ 1.1
SSH3-201ENST00000308127 IL27Q8NEV9 243 aa21.89■■□□□ 1.1
SSH3-201ENST00000308127 PDE3BQ13370 1112 aa21.89■■□□□ 1.09
SSH3-201ENST00000308127 E9PCH4 1651 aa21.89■■□□□ 1.09
SSH3-201ENST00000308127 TMF1P82094 1093 aa21.88■■□□□ 1.09
SSH3-201ENST00000308127 PLEKHH2Q8IVE3 1493 aa21.87■■□□□ 1.09
SSH3-201ENST00000308127 CCDC141Q6ZP82 1450 aa21.87■■□□□ 1.09
SSH3-201ENST00000308127 ERBINQ96RT1 1412 aa21.87■■□□□ 1.09
SSH3-201ENST00000308127 SAMD9LQ8IVG5 1584 aa21.86■■□□□ 1.09
SSH3-201ENST00000308127 NUP160Q12769 1436 aa21.86■■□□□ 1.09
SSH3-201ENST00000308127 SYCP2Q9BX26 1530 aa21.86■■□□□ 1.09
SSH3-201ENST00000308127 TRPM1Q7Z4N2 1603 aa21.85■■□□□ 1.09
SSH3-201ENST00000308127 COL17A1Q9UMD9 1497 aaPredicted RBP21.84■■□□□ 1.09
SSH3-201ENST00000308127 RGS3P49796 1198 aa21.84■■□□□ 1.09
SSH3-201ENST00000308127 WDR43Q15061 677 aaKnown RBP eCLIP21.83■■□□□ 1.08
SSH3-201ENST00000308127 PLEKHH1Q9ULM0 1364 aa21.83■■□□□ 1.08
SSH3-201ENST00000308127 KNSTRNQ9Y448 316 aa21.82■■□□□ 1.08
SSH3-201ENST00000308127 PPP2R1AP30153 589 aa21.81■■□□□ 1.08
SSH3-201ENST00000308127 ARHGAP5Q13017 1502 aa21.81■■□□□ 1.08
SSH3-201ENST00000308127 CDC42BPBQ9Y5S2 1711 aa21.78■■□□□ 1.08
SSH3-201ENST00000308127 MS4A1P11836 297 aa21.78■■□□□ 1.08
SSH3-201ENST00000308127 SPINK5Q9NQ38 1064 aaPredicted RBP21.77■■□□□ 1.08
SSH3-201ENST00000308127 BLMP54132 1417 aaPredicted RBP21.77■■□□□ 1.08
SSH3-201ENST00000308127 DUSP27Q5VZP5 1158 aa21.77■■□□□ 1.07
SSH3-201ENST00000308127 MAGI2Q86UL8 1455 aa21.76■■□□□ 1.07
SSH3-201ENST00000308127 GPRASP1Q5JY77 1395 aa21.76■■□□□ 1.07
SSH3-201ENST00000308127 ARHGEF5Q12774 1597 aa21.74■■□□□ 1.07
SSH3-201ENST00000308127 BCAR3O75815 825 aa21.73■■□□□ 1.07
SSH3-201ENST00000308127 TTC37Q6PGP7 1564 aa21.72■■□□□ 1.07
SSH3-201ENST00000308127 APAF1O14727 1248 aa21.72■■□□□ 1.07
SSH3-201ENST00000308127 AMER1Q5JTC6 1135 aaPredicted RBP21.72■■□□□ 1.07
SSH3-201ENST00000308127 PRDM15P57071 1507 aaPredicted RBP21.71■■□□□ 1.07
SSH3-201ENST00000308127 GOLGA2Q08379 1002 aa21.71■■□□□ 1.07
SSH3-201ENST00000308127 DMRT2Q9Y5R5 561 aa21.71■■□□□ 1.07
SSH3-201ENST00000308127 RSPH4AQ5TD94 716 aa21.7■■□□□ 1.06
SSH3-201ENST00000308127 AFAP1Q8N556 730 aa21.69■■□□□ 1.06
SSH3-201ENST00000308127 ZMYM4Q5VZL5 1548 aa21.69■■□□□ 1.06
SSH3-201ENST00000308127 KDM2BQ8NHM5 1336 aa21.69■■□□□ 1.06
SSH3-201ENST00000308127 WASHC2CQ9Y4E1 1318 aa21.69■■□□□ 1.06
SSH3-201ENST00000308127 TNNT2P45379 298 aaPredicted RBP21.69■■□□□ 1.06
SSH3-201ENST00000308127 ANO8Q9HCE9 1232 aaPredicted RBP21.68■■□□□ 1.06
SSH3-201ENST00000308127 MYO5CQ9NQX4 1742 aa21.68■■□□□ 1.06
SSH3-201ENST00000308127 NEUROD2Q15784 382 aa21.68■■□□□ 1.06
SSH3-201ENST00000308127 DAXXQ9UER7 740 aaPredicted RBP21.68■■□□□ 1.06
SSH3-201ENST00000308127 PREX2Q70Z35 1606 aa21.67■■□□□ 1.06
SSH3-201ENST00000308127 WDR7Q9Y4E6 1490 aa21.67■■□□□ 1.06
SSH3-201ENST00000308127 NFKBIBQ15653 356 aa21.65■■□□□ 1.06
SSH3-201ENST00000308127 C8orf34Q49A92 452 aa21.65■■□□□ 1.06
SSH3-201ENST00000308127 SENP3Q9H4L4 574 aaPredicted RBP21.65■■□□□ 1.06
SSH3-201ENST00000308127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.65■■□□□ 1.06
SSH3-201ENST00000308127 PPM1GO15355 546 aaPredicted RBP21.64■■□□□ 1.06
SSH3-201ENST00000308127 BRPF3Q9ULD4 1205 aa21.64■■□□□ 1.06
SSH3-201ENST00000308127 CENPQQ7L2Z9 268 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms