RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 RALGAPBQ86X10 1494 aa22.57■■□□□ 1.2
SYVN1-202ENST00000307289 POLR1AO95602 1720 aaPredicted RBP22.55■■□□□ 1.2
SYVN1-202ENST00000307289 AFAP1Q8N556 730 aa22.54■■□□□ 1.2
SYVN1-202ENST00000307289 ROCK2O75116 1388 aaKnown RBP22.54■■□□□ 1.2
SYVN1-202ENST00000307289 CCDC144AA2RUR9 1427 aa22.53■■□□□ 1.2
SYVN1-202ENST00000307289 TRAPPC8Q9Y2L5 1435 aa22.53■■□□□ 1.2
SYVN1-202ENST00000307289 ZCCHC11Q5TAX3 1644 aaKnown RBP22.51■■□□□ 1.19
SYVN1-202ENST00000307289 MYO5CQ9NQX4 1742 aa22.51■■□□□ 1.19
SYVN1-202ENST00000307289 PLCH2O75038 1416 aa22.5■■□□□ 1.19
SYVN1-202ENST00000307289 EFCAB2Q5VUJ9 269 aa22.49■■□□□ 1.19
SYVN1-202ENST00000307289 CLASP1Q7Z460 1538 aa22.49■■□□□ 1.19
SYVN1-202ENST00000307289 PRAG1Q86YV5 1406 aa22.46■■□□□ 1.19
SYVN1-202ENST00000307289 A2MP01023 1474 aa22.45■■□□□ 1.18
SYVN1-202ENST00000307289 MAST1Q9Y2H9 1570 aa22.44■■□□□ 1.18
SYVN1-202ENST00000307289 ZBED9Q6R2W3 1325 aa22.44■■□□□ 1.18
SYVN1-202ENST00000307289 UNC13BO14795 1591 aa22.43■■□□□ 1.18
SYVN1-202ENST00000307289 PLXNC1O60486 1568 aa22.39■■□□□ 1.18
SYVN1-202ENST00000307289 SPAG9O60271 1321 aaKnown RBP22.39■■□□□ 1.18
SYVN1-202ENST00000307289 ARID4BQ4LE39 1312 aaPredicted RBP22.39■■□□□ 1.17
SYVN1-202ENST00000307289 DUOX2Q9NRD8 1548 aa22.39■■□□□ 1.17
SYVN1-202ENST00000307289 TMC1Q8TDI8 760 aa22.38■■□□□ 1.17
SYVN1-202ENST00000307289 PNISRQ8TF01 805 aaKnown RBP22.38■■□□□ 1.17
SYVN1-202ENST00000307289 ABCC1P33527 1531 aa22.38■■□□□ 1.17
SYVN1-202ENST00000307289 UHRF1BP1LA0JNW5 1464 aa22.37■■□□□ 1.17
SYVN1-202ENST00000307289 IQGAP3Q86VI3 1631 aa22.37■■□□□ 1.17
SYVN1-202ENST00000307289 MYT1LQ9UL68 1186 aa22.36■■□□□ 1.17
SYVN1-202ENST00000307289 TRPM1Q7Z4N2 1603 aa22.36■■□□□ 1.17
SYVN1-202ENST00000307289 DISP3Q9P2K9 1392 aa22.35■■□□□ 1.17
SYVN1-202ENST00000307289 TESK2Q96S53 571 aa22.34■■□□□ 1.17
SYVN1-202ENST00000307289 ERBINQ96RT1 1412 aa22.34■■□□□ 1.17
SYVN1-202ENST00000307289 SALL2Q9Y467 1007 aaPredicted RBP22.32■■□□□ 1.16
SYVN1-202ENST00000307289 MAGI2Q86UL8 1455 aa22.3■■□□□ 1.16
SYVN1-202ENST00000307289 CC2D1BQ5T0F9 858 aaKnown RBP22.3■■□□□ 1.16
SYVN1-202ENST00000307289 B4GALNT3Q6L9W6 998 aa22.3■■□□□ 1.16
SYVN1-202ENST00000307289 RBM19Q9Y4C8 960 aaKnown RBP22.3■■□□□ 1.16
SYVN1-202ENST00000307289 KIF3BO15066 747 aa22.28■■□□□ 1.16
SYVN1-202ENST00000307289 PER1O15534 1290 aaPredicted RBP22.28■■□□□ 1.16
SYVN1-202ENST00000307289 GPRASP1Q5JY77 1395 aa22.27■■□□□ 1.16
SYVN1-202ENST00000307289 WDR7Q9Y4E6 1490 aa22.27■■□□□ 1.16
SYVN1-202ENST00000307289 SCAPERQ9BY12 1400 aa22.27■■□□□ 1.16
SYVN1-202ENST00000307289 ZFYVE16Q7Z3T8 1539 aa22.26■■□□□ 1.15
SYVN1-202ENST00000307289 MYBBP1AQ9BQG0 1328 aaKnown RBP22.26■■□□□ 1.15
SYVN1-202ENST00000307289 FANCAO15360 1455 aa22.26■■□□□ 1.15
SYVN1-202ENST00000307289 PANK3Q9H999 370 aa22.26■■□□□ 1.15
SYVN1-202ENST00000307289 E9PCH4 1651 aa22.24■■□□□ 1.15
SYVN1-202ENST00000307289 ATP10AO60312 1499 aa22.23■■□□□ 1.15
SYVN1-202ENST00000307289 RALBP1Q15311 655 aa22.21■■□□□ 1.15
SYVN1-202ENST00000307289 PRDM15P57071 1507 aaPredicted RBP22.21■■□□□ 1.15
SYVN1-202ENST00000307289 PPP4R2Q9NY27 417 aa22.21■■□□□ 1.15
SYVN1-202ENST00000307289 NUDCQ9Y266 331 aa22.21■■□□□ 1.15
SYVN1-202ENST00000307289 ASXL2Q76L83 1435 aa22.2■■□□□ 1.14
SYVN1-202ENST00000307289 COL17A1Q9UMD9 1497 aaPredicted RBP22.2■■□□□ 1.14
SYVN1-202ENST00000307289 SMG6Q86US8 1419 aaKnown RBP22.19■■□□□ 1.14
SYVN1-202ENST00000307289 ADGRL1O94910 1474 aa22.18■■□□□ 1.14
SYVN1-202ENST00000307289 BRD4O60885 1362 aaPredicted RBP22.18■■□□□ 1.14
SYVN1-202ENST00000307289 LRPPRCP42704 1394 aaKnown RBP22.18■■□□□ 1.14
SYVN1-202ENST00000307289 KTN1Q86UP2 1357 aaKnown RBP22.18■■□□□ 1.14
SYVN1-202ENST00000307289 RTEL1-TNFRSF6BF6WH68 1400 aa22.17■■□□□ 1.14
SYVN1-202ENST00000307289 PARD3Q8TEW0 1356 aa22.17■■□□□ 1.14
SYVN1-202ENST00000307289 UGGT1Q9NYU2 1555 aa22.17■■□□□ 1.14
SYVN1-202ENST00000307289 TMF1P82094 1093 aa22.16■■□□□ 1.14
SYVN1-202ENST00000307289 ATP7AQ04656 1500 aa22.16■■□□□ 1.14
SYVN1-202ENST00000307289 NLRP13Q86W25 1043 aa22.15■■□□□ 1.14
SYVN1-202ENST00000307289 CLTCL1P53675 1640 aa22.14■■□□□ 1.14
SYVN1-202ENST00000307289 ABCA9Q8IUA7 1624 aa22.13■■□□□ 1.13
SYVN1-202ENST00000307289 PTPRTO14522 1441 aa22.11■■□□□ 1.13
SYVN1-202ENST00000307289 TRPM2O94759 1503 aa22.11■■□□□ 1.13
SYVN1-202ENST00000307289 ARAP3Q8WWN8 1544 aa22.1■■□□□ 1.13
SYVN1-202ENST00000307289 MADDQ8WXG6 1647 aa22.1■■□□□ 1.13
SYVN1-202ENST00000307289 CFAP70Q5T0N1 1121 aa22.1■■□□□ 1.13
SYVN1-202ENST00000307289 CDCA7LQ96GN5 454 aa22.1■■□□□ 1.13
SYVN1-202ENST00000307289 EIF2AK4Q9P2K8 1649 aaKnown RBP22.1■■□□□ 1.13
SYVN1-202ENST00000307289 INO80Q9ULG1 1556 aaPredicted RBP22.1■■□□□ 1.13
SYVN1-202ENST00000307289 ADGRF5Q8IZF2 1346 aa22.08■■□□□ 1.13
SYVN1-202ENST00000307289 SPHKAPQ2M3C7 1700 aa22.08■■□□□ 1.13
SYVN1-202ENST00000307289 ERICH6BQ5W0A0 696 aa22.08■■□□□ 1.13
SYVN1-202ENST00000307289 LAMC1P11047 1609 aa22.08■■□□□ 1.12
SYVN1-202ENST00000307289 KANK1Q14678 1352 aa22.07■■□□□ 1.12
SYVN1-202ENST00000307289 DEPDC5O75140 1603 aa22.07■■□□□ 1.12
SYVN1-202ENST00000307289 OSCARQ8IYS5 282 aa22.07■■□□□ 1.12
SYVN1-202ENST00000307289 RNF17Q9BXT8 1623 aaKnown RBP22.06■■□□□ 1.12
SYVN1-202ENST00000307289 CHGAP10645 457 aaKnown RBP22.05■■□□□ 1.12
SYVN1-202ENST00000307289 MROH1Q8NDA8 1641 aa22.05■■□□□ 1.12
SYVN1-202ENST00000307289 GGT6Q6P531 493 aa22.05■■□□□ 1.12
SYVN1-202ENST00000307289 RNF123Q5XPI4 1314 aa22.04■■□□□ 1.12
SYVN1-202ENST00000307289 NPM1P06748 294 aaKnown RBP eCLIP22.03■■□□□ 1.12
SYVN1-202ENST00000307289 TET3O43151 1660 aa22.03■■□□□ 1.12
SYVN1-202ENST00000307289 SENP3Q9H4L4 574 aaPredicted RBP22.02■■□□□ 1.12
SYVN1-202ENST00000307289 CEP152O94986 1710 aa22.02■■□□□ 1.12
SYVN1-202ENST00000307289 VWDEQ8N2E2 1590 aa22.02■■□□□ 1.12
SYVN1-202ENST00000307289 MSH5O43196 834 aa22.01■■□□□ 1.11
SYVN1-202ENST00000307289 KIDINS220Q9ULH0 1771 aa22.01■■□□□ 1.11
SYVN1-202ENST00000307289 CFAP65Q6ZU64 1925 aaKnown RBP22.01■■□□□ 1.11
SYVN1-202ENST00000307289 RAPGEF3O95398 923 aa22■■□□□ 1.11
SYVN1-202ENST00000307289 KNSTRNQ9Y448 316 aa22■■□□□ 1.11
SYVN1-202ENST00000307289 SCAF11Q99590 1463 aaKnown RBP22■■□□□ 1.11
SYVN1-202ENST00000307289 ADAMTS8Q9UP79 889 aa21.99■■□□□ 1.11
SYVN1-202ENST00000307289 IQGAP1P46940 1657 aa21.99■■□□□ 1.11
SYVN1-202ENST00000307289 AMER1Q5JTC6 1135 aaPredicted RBP21.98■■□□□ 1.11
SYVN1-202ENST00000307289 NUTM2DQ5VT03 806 aaPredicted RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms