RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 MAP3K4Q9Y6R4 1608 aa31.68■■■□□ 2.66
SMAD1-201ENST00000302085 PLA2R1Q13018 1463 aa31.65■■■□□ 2.66
SMAD1-201ENST00000302085 KDM5CP41229 1560 aa31.65■■■□□ 2.66
SMAD1-201ENST00000302085 DEPDC5O75140 1603 aa31.62■■■□□ 2.65
SMAD1-201ENST00000302085 MLH3Q9UHC1 1453 aa31.61■■■□□ 2.65
SMAD1-201ENST00000302085 KIF3BO15066 747 aa31.6■■■□□ 2.65
SMAD1-201ENST00000302085 FAM69CQ0P6D2 419 aa31.59■■■□□ 2.65
SMAD1-201ENST00000302085 EIF2AK4Q9P2K8 1649 aaKnown RBP31.58■■■□□ 2.65
SMAD1-201ENST00000302085 CCDC144AA2RUR9 1427 aa31.57■■■□□ 2.64
SMAD1-201ENST00000302085 RAPGEF3O95398 923 aa31.56■■■□□ 2.64
SMAD1-201ENST00000302085 HSPA5P11021 654 aaKnown RBP31.56■■■□□ 2.64
SMAD1-201ENST00000302085 DIP2BQ9P265 1576 aa31.55■■■□□ 2.64
SMAD1-201ENST00000302085 ATP10AO60312 1499 aa31.55■■■□□ 2.64
SMAD1-201ENST00000302085 A2MP01023 1474 aa31.54■■■□□ 2.64
SMAD1-201ENST00000302085 VWDEQ8N2E2 1590 aa31.54■■■□□ 2.64
SMAD1-201ENST00000302085 HECW2Q9P2P5 1572 aa31.53■■■□□ 2.64
SMAD1-201ENST00000302085 EIF4G2P78344 907 aaKnown RBP eCLIP31.53■■■□□ 2.64
SMAD1-201ENST00000302085 DDX10Q13206 875 aaKnown RBP31.52■■■□□ 2.64
SMAD1-201ENST00000302085 KANK1Q14678 1352 aa31.51■■■□□ 2.63
SMAD1-201ENST00000302085 UHRF1BP1Q6BDS2 1440 aa31.5■■■□□ 2.63
SMAD1-201ENST00000302085 MROH1Q8NDA8 1641 aa31.5■■■□□ 2.63
SMAD1-201ENST00000302085 E9PCH4 1651 aa31.5■■■□□ 2.63
SMAD1-201ENST00000302085 PRDM15P57071 1507 aaPredicted RBP31.48■■■□□ 2.63
SMAD1-201ENST00000302085 ZNF326Q5BKZ1 582 aaKnown RBP31.47■■■□□ 2.63
SMAD1-201ENST00000302085 DCAF11Q8TEB1 546 aa31.47■■■□□ 2.63
SMAD1-201ENST00000302085 FRMPD1Q5SYB0 1578 aa31.46■■■□□ 2.63
SMAD1-201ENST00000302085 TET3O43151 1660 aa31.46■■■□□ 2.63
SMAD1-201ENST00000302085 KDM2AQ9Y2K7 1162 aa31.45■■■□□ 2.63
SMAD1-201ENST00000302085 RICTORQ6R327 1708 aa31.45■■■□□ 2.63
SMAD1-201ENST00000302085 ABCA6Q8N139 1617 aa31.45■■■□□ 2.62
SMAD1-201ENST00000302085 PTPRTO14522 1441 aa31.41■■■□□ 2.62
SMAD1-201ENST00000302085 SPATA31E1Q6ZUB1 1445 aa31.4■■■□□ 2.62
SMAD1-201ENST00000302085 RGL3Q3MIN7 710 aa31.4■■■□□ 2.62
SMAD1-201ENST00000302085 RNF17Q9BXT8 1623 aaKnown RBP31.4■■■□□ 2.62
SMAD1-201ENST00000302085 PPRC1Q5VV67 1664 aaKnown RBP31.39■■■□□ 2.61
SMAD1-201ENST00000302085 TSPOAP1O95153 1857 aa31.37■■■□□ 2.61
SMAD1-201ENST00000302085 TRPM2O94759 1503 aa31.36■■■□□ 2.61
SMAD1-201ENST00000302085 DIP2CQ9Y2E4 1556 aa31.36■■■□□ 2.61
SMAD1-201ENST00000302085 RALGAPBQ86X10 1494 aa31.36■■■□□ 2.61
SMAD1-201ENST00000302085 WASHC2AQ641Q2 1341 aa31.34■■■□□ 2.61
SMAD1-201ENST00000302085 SPHKAPQ2M3C7 1700 aa31.34■■■□□ 2.61
SMAD1-201ENST00000302085 BCORL1Q5H9F3 1711 aa31.34■■■□□ 2.61
SMAD1-201ENST00000302085 LMTK2Q8IWU2 1503 aa31.33■■■□□ 2.61
SMAD1-201ENST00000302085 YEATS2Q9ULM3 1422 aa31.31■■■□□ 2.6
SMAD1-201ENST00000302085 GGT6Q6P531 493 aa31.31■■■□□ 2.6
SMAD1-201ENST00000302085 C11orf95C9JLR9 678 aaPredicted RBP31.3■■■□□ 2.6
SMAD1-201ENST00000302085 PRAG1Q86YV5 1406 aa31.3■■■□□ 2.6
SMAD1-201ENST00000302085 EFCAB6Q5THR3 1501 aa31.29■■■□□ 2.6
SMAD1-201ENST00000302085 CEP152O94986 1710 aa31.27■■■□□ 2.6
SMAD1-201ENST00000302085 USP47Q96K76 1375 aa31.27■■■□□ 2.6
SMAD1-201ENST00000302085 CLTCL1P53675 1640 aa31.27■■■□□ 2.6
SMAD1-201ENST00000302085 KIF13AQ9H1H9 1805 aa31.26■■■□□ 2.6
SMAD1-201ENST00000302085 ZMYM4Q5VZL5 1548 aa31.26■■■□□ 2.59
SMAD1-201ENST00000302085 CARD11Q9BXL7 1154 aa31.25■■■□□ 2.59
SMAD1-201ENST00000302085 CCDC7Q96M83 1385 aa31.22■■■□□ 2.59
SMAD1-201ENST00000302085 WASHC2CQ9Y4E1 1318 aa31.2■■■□□ 2.58
SMAD1-201ENST00000302085 TRPM1Q7Z4N2 1603 aa31.2■■■□□ 2.58
SMAD1-201ENST00000302085 ABCC3O15438 1527 aa31.19■■■□□ 2.58
SMAD1-201ENST00000302085 ROCK2O75116 1388 aaKnown RBP31.18■■■□□ 2.58
SMAD1-201ENST00000302085 YTHDC1Q96MU7 727 aaKnown RBP31.18■■■□□ 2.58
SMAD1-201ENST00000302085 NPATQ14207 1427 aa31.16■■■□□ 2.58
SMAD1-201ENST00000302085 NBPF1Q3BBV0 1214 aa31.16■■■□□ 2.58
SMAD1-201ENST00000302085 KIF7Q2M1P5 1343 aa31.15■■■□□ 2.58
SMAD1-201ENST00000302085 UGGT1Q9NYU2 1555 aa31.15■■■□□ 2.58
SMAD1-201ENST00000302085 GPRASP1Q5JY77 1395 aa31.12■■■□□ 2.57
SMAD1-201ENST00000302085 NEURL4Q96JN8 1562 aa31.11■■■□□ 2.57
SMAD1-201ENST00000302085 COL17A1Q9UMD9 1497 aaPredicted RBP31.11■■■□□ 2.57
SMAD1-201ENST00000302085 ANP32CO43423 234 aa31.11■■■□□ 2.57
SMAD1-201ENST00000302085 POLR1AO95602 1720 aaPredicted RBP31.11■■■□□ 2.57
SMAD1-201ENST00000302085 STAC3Q96MF2 364 aa31.1■■■□□ 2.57
SMAD1-201ENST00000302085 CENPBP07199 599 aaPredicted RBP31.08■■■□□ 2.57
SMAD1-201ENST00000302085 CAMSAP1Q5T5Y3 1602 aa31.08■■■□□ 2.57
SMAD1-201ENST00000302085 ST20-MTHFSA0A0A6YYL1 179 aa31.08■■■□□ 2.57
SMAD1-201ENST00000302085 CNTLNQ9NXG0 1405 aa31.06■■■□□ 2.56
SMAD1-201ENST00000302085 CFAP65Q6ZU64 1925 aaKnown RBP31.06■■■□□ 2.56
SMAD1-201ENST00000302085 MADDQ8WXG6 1647 aa31.04■■■□□ 2.56
SMAD1-201ENST00000302085 KIF1BO60333 1816 aa31.04■■■□□ 2.56
SMAD1-201ENST00000302085 LAMC1P11047 1609 aa31.03■■■□□ 2.56
SMAD1-201ENST00000302085 REREQ9P2R6 1566 aa31.03■■■□□ 2.56
SMAD1-201ENST00000302085 ARHGAP31Q2M1Z3 1444 aa31.02■■■□□ 2.56
SMAD1-201ENST00000302085 ZC3H13Q5T200 1668 aaKnown RBP31.01■■■□□ 2.56
SMAD1-201ENST00000302085 NOS1P29475 1434 aa31.01■■■□□ 2.56
SMAD1-201ENST00000302085 ARID4BQ4LE39 1312 aaPredicted RBP31.01■■■□□ 2.55
SMAD1-201ENST00000302085 SIGLEC1Q9BZZ2 1709 aa31■■■□□ 2.55
SMAD1-201ENST00000302085 CCER2I3L3R5 266 aa30.99■■■□□ 2.55
SMAD1-201ENST00000302085 AGLP35573 1532 aa30.99■■■□□ 2.55
SMAD1-201ENST00000302085 MROH2AA6NES4 1674 aa30.97■■■□□ 2.55
SMAD1-201ENST00000302085 ADGRB3O60242 1522 aa30.95■■■□□ 2.55
SMAD1-201ENST00000302085 MYOM2P54296 1465 aa30.93■■■□□ 2.54
SMAD1-201ENST00000302085 CHGAP10645 457 aaKnown RBP30.93■■■□□ 2.54
SMAD1-201ENST00000302085 SYNMO15061 1565 aa30.92■■■□□ 2.54
SMAD1-201ENST00000302085 ADGRF5Q8IZF2 1346 aa30.91■■■□□ 2.54
SMAD1-201ENST00000302085 IFT172Q9UG01 1749 aa30.91■■■□□ 2.54
SMAD1-201ENST00000302085 POLR3GLQ9BT43 218 aa30.91■■■□□ 2.54
SMAD1-201ENST00000302085 ARHGEF40Q8TER5 1519 aa30.9■■■□□ 2.54
SMAD1-201ENST00000302085 PPP6R1Q9UPN7 881 aa30.9■■■□□ 2.54
SMAD1-201ENST00000302085 PIK3C2BO00750 1634 aa30.88■■■□□ 2.53
SMAD1-201ENST00000302085 TESK2Q96S53 571 aa30.87■■■□□ 2.53
SMAD1-201ENST00000302085 NRXN1Q9ULB1 1477 aa30.85■■■□□ 2.53
SMAD1-201ENST00000302085 KIAA1210Q9ULL0 1709 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms