RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CENPQQ7L2Z9 268 aaPredicted RBP19.08■□□□□ 0.65
COL6A2-201ENST00000300527 ABCA5Q8WWZ7 1642 aa19.08■□□□□ 0.64
COL6A2-201ENST00000300527 SPRYD3Q8NCJ5 442 aa19.07■□□□□ 0.64
COL6A2-201ENST00000300527 PDS5BQ9NTI5 1447 aa19.07■□□□□ 0.64
COL6A2-201ENST00000300527 FBLN2P98095 1184 aa19.07■□□□□ 0.64
COL6A2-201ENST00000300527 PRG4Q92954 1404 aaPredicted RBP19.06■□□□□ 0.64
COL6A2-201ENST00000300527 C8orf34Q49A92 452 aa19.06■□□□□ 0.64
COL6A2-201ENST00000300527 URB2Q14146 1524 aaKnown RBP19.06■□□□□ 0.64
COL6A2-201ENST00000300527 POGKQ9P215 609 aa19.06■□□□□ 0.64
COL6A2-201ENST00000300527 TSPY4P0CV99 314 aa19.05■□□□□ 0.64
COL6A2-201ENST00000300527 TSPY10P0CW01 314 aa19.05■□□□□ 0.64
COL6A2-201ENST00000300527 CANXP27824 592 aaKnown RBP19.04■□□□□ 0.64
COL6A2-201ENST00000300527 ANKRD30AQ9BXX3 1397 aa19.04■□□□□ 0.64
COL6A2-201ENST00000300527 ANKRD50Q9ULJ7 1429 aa19.03■□□□□ 0.64
COL6A2-201ENST00000300527 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.03■□□□□ 0.64
COL6A2-201ENST00000300527 KDM5CP41229 1560 aa19.02■□□□□ 0.63
COL6A2-201ENST00000300527 HNRNPMP52272 730 aaKnown RBP eCLIP19.01■□□□□ 0.63
COL6A2-201ENST00000300527 UBE2Q2Q8WVN8 375 aa19.01■□□□□ 0.63
COL6A2-201ENST00000300527 GZF1Q9H116 711 aaPredicted RBP19.01■□□□□ 0.63
COL6A2-201ENST00000300527 PER1O15534 1290 aaPredicted RBP18.99■□□□□ 0.63
COL6A2-201ENST00000300527 DNAJC5BQ9UF47 199 aa18.99■□□□□ 0.63
COL6A2-201ENST00000300527 MBD5Q9P267 1494 aa18.99■□□□□ 0.63
COL6A2-201ENST00000300527 PARD3Q8TEW0 1356 aa18.99■□□□□ 0.63
COL6A2-201ENST00000300527 KDM2BQ8NHM5 1336 aa18.99■□□□□ 0.63
COL6A2-201ENST00000300527 BCAR3O75815 825 aa18.99■□□□□ 0.63
COL6A2-201ENST00000300527 GOLGA2Q08379 1002 aa18.99■□□□□ 0.63
COL6A2-201ENST00000300527 LAMC3Q9Y6N6 1575 aa18.98■□□□□ 0.63
COL6A2-201ENST00000300527 RALGAPBQ86X10 1494 aa18.98■□□□□ 0.63
COL6A2-201ENST00000300527 KNSTRNQ9Y448 316 aa18.98■□□□□ 0.63
COL6A2-201ENST00000300527 CAMSAP2Q08AD1 1489 aa18.97■□□□□ 0.63
COL6A2-201ENST00000300527 DUSP27Q5VZP5 1158 aa18.96■□□□□ 0.63
COL6A2-201ENST00000300527 DNMT1P26358 1616 aaKnown RBP18.95■□□□□ 0.62
COL6A2-201ENST00000300527 POLR1AO95602 1720 aaPredicted RBP18.95■□□□□ 0.62
COL6A2-201ENST00000300527 SEC24BO95487 1268 aa18.95■□□□□ 0.62
COL6A2-201ENST00000300527 NEUROD2Q15784 382 aa18.95■□□□□ 0.62
COL6A2-201ENST00000300527 DISP3Q9P2K9 1392 aa18.95■□□□□ 0.62
COL6A2-201ENST00000300527 TMF1P82094 1093 aa18.95■□□□□ 0.62
COL6A2-201ENST00000300527 KIF14Q15058 1648 aa18.95■□□□□ 0.62
COL6A2-201ENST00000300527 PLEKHH1Q9ULM0 1364 aa18.94■□□□□ 0.62
COL6A2-201ENST00000300527 NAP1L5Q96NT1 182 aaPredicted RBP18.93■□□□□ 0.62
COL6A2-201ENST00000300527 RSPH6AQ9H0K4 717 aa18.93■□□□□ 0.62
COL6A2-201ENST00000300527 WDR62O43379 1518 aa18.93■□□□□ 0.62
COL6A2-201ENST00000300527 IQGAP2Q13576 1575 aa18.93■□□□□ 0.62
COL6A2-201ENST00000300527 APAF1O14727 1248 aa18.93■□□□□ 0.62
COL6A2-201ENST00000300527 FAM43AQ8N2R8 423 aa18.93■□□□□ 0.62
COL6A2-201ENST00000300527 COG6Q9Y2V7 657 aa18.92■□□□□ 0.62
COL6A2-201ENST00000300527 IGHDP01880 384 aa18.92■□□□□ 0.62
COL6A2-201ENST00000300527 BECN1Q14457 450 aa18.91■□□□□ 0.62
COL6A2-201ENST00000300527 KIAA0586Q9BVV6 1533 aa18.91■□□□□ 0.62
COL6A2-201ENST00000300527 PLEKHD1A6NEE1 506 aa18.91■□□□□ 0.62
COL6A2-201ENST00000300527 PANK1Q8TE04 598 aa18.91■□□□□ 0.62
COL6A2-201ENST00000300527 SPINK5Q9NQ38 1064 aaPredicted RBP18.9■□□□□ 0.62
COL6A2-201ENST00000300527 PPP2R1AP30153 589 aa18.9■□□□□ 0.62
COL6A2-201ENST00000300527 RRAGDQ9NQL2 400 aaPredicted RBP18.9■□□□□ 0.62
COL6A2-201ENST00000300527 NUP153P49790 1475 aaKnown RBP18.88■□□□□ 0.61
COL6A2-201ENST00000300527 UHRF1BP1Q6BDS2 1440 aa18.88■□□□□ 0.61
COL6A2-201ENST00000300527 BCL2L13Q9BXK5 485 aa18.86■□□□□ 0.61
COL6A2-201ENST00000300527 CCDC144AA2RUR9 1427 aa18.86■□□□□ 0.61
COL6A2-201ENST00000300527 TESK2Q96S53 571 aa18.86■□□□□ 0.61
COL6A2-201ENST00000300527 UPF2Q9HAU5 1272 aaKnown RBP18.86■□□□□ 0.61
COL6A2-201ENST00000300527 TROQ12816 1431 aaPredicted RBP18.85■□□□□ 0.61
COL6A2-201ENST00000300527 TNNT2P45379 298 aaPredicted RBP18.85■□□□□ 0.61
COL6A2-201ENST00000300527 CLUAP1Q96AJ1 413 aa18.84■□□□□ 0.61
COL6A2-201ENST00000300527 GPATCH8Q9UKJ3 1502 aaKnown RBP18.84■□□□□ 0.61
COL6A2-201ENST00000300527 C9orf84Q5VXU9 1444 aa18.84■□□□□ 0.61
COL6A2-201ENST00000300527 SLFN5Q08AF3 891 aa18.83■□□□□ 0.61
COL6A2-201ENST00000300527 RRP7AQ9Y3A4 280 aaKnown RBP18.83■□□□□ 0.6
COL6A2-201ENST00000300527 PLB1Q6P1J6 1458 aa18.83■□□□□ 0.6
COL6A2-201ENST00000300527 BLMP54132 1417 aaPredicted RBP18.82■□□□□ 0.6
COL6A2-201ENST00000300527 DMRT2Q9Y5R5 561 aa18.82■□□□□ 0.6
COL6A2-201ENST00000300527 L1TD1Q5T7N2 865 aaKnown RBP18.81■□□□□ 0.6
COL6A2-201ENST00000300527 CHMP7Q8WUX9 453 aaPredicted RBP18.81■□□□□ 0.6
COL6A2-201ENST00000300527 PANK2Q9BZ23 570 aa18.81■□□□□ 0.6
COL6A2-201ENST00000300527 ERBINQ96RT1 1412 aa18.81■□□□□ 0.6
COL6A2-201ENST00000300527 PNNQ9H307 717 aaKnown RBP18.79■□□□□ 0.6
COL6A2-201ENST00000300527 GOLGA6L3A6NEY3 463 aa18.79■□□□□ 0.6
COL6A2-201ENST00000300527 USP19O94966 1318 aa18.78■□□□□ 0.6
COL6A2-201ENST00000300527 PRAG1Q86YV5 1406 aa18.77■□□□□ 0.6
COL6A2-201ENST00000300527 ZMYM4Q5VZL5 1548 aa18.77■□□□□ 0.6
COL6A2-201ENST00000300527 TNNQ9UQP3 1299 aa18.77■□□□□ 0.6
COL6A2-201ENST00000300527 CENPJQ9HC77 1338 aaPredicted RBP18.77■□□□□ 0.59
COL6A2-201ENST00000300527 VSIG10Q8N0Z9 540 aa18.76■□□□□ 0.59
COL6A2-201ENST00000300527 KIF21AQ7Z4S6 1674 aa18.76■□□□□ 0.59
COL6A2-201ENST00000300527 MFAP1P55081 439 aaKnown RBP18.75■□□□□ 0.59
COL6A2-201ENST00000300527 SLC24A1O60721 1099 aa18.74■□□□□ 0.59
COL6A2-201ENST00000300527 TBC1D2Q9BYX2 928 aa18.74■□□□□ 0.59
COL6A2-201ENST00000300527 XRCC6P12956 609 aaKnown RBP eCLIP18.73■□□□□ 0.59
COL6A2-201ENST00000300527 ARHGEF12Q9NZN5 1544 aa18.73■□□□□ 0.59
COL6A2-201ENST00000300527 E9PSI1 815 aa18.72■□□□□ 0.59
COL6A2-201ENST00000300527 MAPK8IP3Q9UPT6 1336 aa18.72■□□□□ 0.59
COL6A2-201ENST00000300527 COL17A1Q9UMD9 1497 aaPredicted RBP18.72■□□□□ 0.59
COL6A2-201ENST00000300527 DISP1Q96F81 1524 aa18.72■□□□□ 0.59
COL6A2-201ENST00000300527 CGNL1Q0VF96 1302 aa18.71■□□□□ 0.59
COL6A2-201ENST00000300527 AMER1Q5JTC6 1135 aaPredicted RBP18.71■□□□□ 0.59
COL6A2-201ENST00000300527 PDZRN3Q9UPQ7 1066 aa18.71■□□□□ 0.59
COL6A2-201ENST00000300527 PLEKHH2Q8IVE3 1493 aa18.7■□□□□ 0.58
COL6A2-201ENST00000300527 ADGRL2O95490 1459 aa18.7■□□□□ 0.58
COL6A2-201ENST00000300527 RAPGEF6Q8TEU7 1601 aa18.7■□□□□ 0.58
COL6A2-201ENST00000300527 ZNF521Q96K83 1311 aa18.69■□□□□ 0.58
COL6A2-201ENST00000300527 GLIPR1L2Q4G1C9 344 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms