RNA–Protein interactions for RNA: ENST00000299954.13

PITPNC1-201, Transcript of phosphatidylinositol transfer protein cytoplasmic 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PITPNC1, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNC1-201ENST00000299954 CEP89Q96ST8 783 aa22.8■■□□□ 1.24
PITPNC1-201ENST00000299954 BCL2L13Q9BXK5 485 aa22.8■■□□□ 1.24
PITPNC1-201ENST00000299954 ST18O60284 1047 aa22.79■■□□□ 1.24
PITPNC1-201ENST00000299954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.79■■□□□ 1.24
PITPNC1-201ENST00000299954 TPD52L1Q16890 204 aaPredicted RBP22.78■■□□□ 1.24
PITPNC1-201ENST00000299954 H3BQV1 296 aa22.78■■□□□ 1.24
PITPNC1-201ENST00000299954 FRAT2O75474 233 aaPredicted RBP22.78■■□□□ 1.24
PITPNC1-201ENST00000299954 IFFO2Q5TF58 517 aa22.78■■□□□ 1.24
PITPNC1-201ENST00000299954 ZNF592Q92610 1267 aa22.78■■□□□ 1.24
PITPNC1-201ENST00000299954 PHF14O94880 888 aa22.77■■□□□ 1.24
PITPNC1-201ENST00000299954 ELL2O00472 640 aaPredicted RBP22.77■■□□□ 1.24
PITPNC1-201ENST00000299954 KANK4Q5T7N3 995 aaPredicted RBP22.77■■□□□ 1.24
PITPNC1-201ENST00000299954 VSIG10Q8N0Z9 540 aa22.76■■□□□ 1.23
PITPNC1-201ENST00000299954 MPHOSPH9Q99550 1183 aa22.76■■□□□ 1.23
PITPNC1-201ENST00000299954 DDX49Q9Y6V7 483 aaKnown RBP22.75■■□□□ 1.23
PITPNC1-201ENST00000299954 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
PITPNC1-201ENST00000299954 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
PITPNC1-201ENST00000299954 ARHGAP35Q9NRY4 1499 aa22.73■■□□□ 1.23
PITPNC1-201ENST00000299954 ANKRD45Q5TZF3 282 aa22.73■■□□□ 1.23
PITPNC1-201ENST00000299954 DDX11L8A8MPP1 907 aa22.71■■□□□ 1.23
PITPNC1-201ENST00000299954 BCL11BQ9C0K0 894 aaPredicted RBP22.71■■□□□ 1.23
PITPNC1-201ENST00000299954 FHAD1B1AJZ9 1412 aa22.71■■□□□ 1.23
PITPNC1-201ENST00000299954 TIMELESSQ9UNS1 1208 aa22.71■■□□□ 1.23
PITPNC1-201ENST00000299954 MCTP1Q6DN14 999 aa22.7■■□□□ 1.23
PITPNC1-201ENST00000299954 NUP155O75694 1391 aa22.7■■□□□ 1.22
PITPNC1-201ENST00000299954 FAM184AQ8NB25 1140 aa22.7■■□□□ 1.22
PITPNC1-201ENST00000299954 GOLGA6L19H0YKK7 550 aa22.7■■□□□ 1.22
PITPNC1-201ENST00000299954 ZNF771Q7L3S4 317 aaPredicted RBP22.69■■□□□ 1.22
PITPNC1-201ENST00000299954 RAB3GAP2Q9H2M9 1393 aa22.69■■□□□ 1.22
PITPNC1-201ENST00000299954 SETQ01105 290 aaPredicted RBP22.69■■□□□ 1.22
PITPNC1-201ENST00000299954 AMPHP49418 695 aa22.69■■□□□ 1.22
PITPNC1-201ENST00000299954 BECN2A8MW95 431 aa22.67■■□□□ 1.22
PITPNC1-201ENST00000299954 FBXW7Q969H0 707 aa22.67■■□□□ 1.22
PITPNC1-201ENST00000299954 PDE4AP27815 886 aa22.66■■□□□ 1.22
PITPNC1-201ENST00000299954 NGDNQ8NEJ9 315 aaKnown RBP22.66■■□□□ 1.22
PITPNC1-201ENST00000299954 SOGA1O94964 1423 aa22.66■■□□□ 1.22
PITPNC1-201ENST00000299954 RAD21O60216 631 aa22.66■■□□□ 1.22
PITPNC1-201ENST00000299954 GTF2E1P29083 439 aaPredicted RBP22.66■■□□□ 1.22
PITPNC1-201ENST00000299954 TSR1Q2NL82 804 aaKnown RBP22.65■■□□□ 1.22
PITPNC1-201ENST00000299954 GSE1Q14687 1217 aa22.65■■□□□ 1.22
PITPNC1-201ENST00000299954 EXOC6Q8TAG9 804 aa22.65■■□□□ 1.22
PITPNC1-201ENST00000299954 NGEFQ8N5V2 710 aa22.65■■□□□ 1.22
PITPNC1-201ENST00000299954 CARMIL1Q5VZK9 1371 aa22.64■■□□□ 1.21
PITPNC1-201ENST00000299954 CRBNQ96SW2 442 aa22.63■■□□□ 1.21
PITPNC1-201ENST00000299954 TERF2IPQ9NYB0 399 aa22.63■■□□□ 1.21
PITPNC1-201ENST00000299954 RSPH6AQ9H0K4 717 aa22.63■■□□□ 1.21
PITPNC1-201ENST00000299954 PCMTD1Q96MG8 357 aaPredicted RBP22.62■■□□□ 1.21
PITPNC1-201ENST00000299954 L3MBTL2Q969R5 705 aa22.61■■□□□ 1.21
PITPNC1-201ENST00000299954 EIF3AQ14152 1382 aaKnown RBP22.61■■□□□ 1.21
PITPNC1-201ENST00000299954 FAM161AQ3B820 660 aa22.61■■□□□ 1.21
PITPNC1-201ENST00000299954 KIF3AQ9Y496 699 aa22.61■■□□□ 1.21
PITPNC1-201ENST00000299954 CUX2O14529 1486 aa22.6■■□□□ 1.21
PITPNC1-201ENST00000299954 FOSBP53539 338 aa22.6■■□□□ 1.21
PITPNC1-201ENST00000299954 NECTIN2Q92692 538 aa22.6■■□□□ 1.21
PITPNC1-201ENST00000299954 TRAK1Q9UPV9 953 aa22.6■■□□□ 1.21
PITPNC1-201ENST00000299954 FAM13BQ9NYF5 915 aa22.59■■□□□ 1.21
PITPNC1-201ENST00000299954 AKAP17AQ02040 695 aaKnown RBP22.59■■□□□ 1.21
PITPNC1-201ENST00000299954 NLRP13Q86W25 1043 aa22.59■■□□□ 1.21
PITPNC1-201ENST00000299954 USP35Q9P2H5 1018 aa22.59■■□□□ 1.21
PITPNC1-201ENST00000299954 COG6Q9Y2V7 657 aa22.59■■□□□ 1.21
PITPNC1-201ENST00000299954 HDAC5Q9UQL6 1122 aa22.58■■□□□ 1.21
PITPNC1-201ENST00000299954 KIF3BO15066 747 aa22.57■■□□□ 1.2
PITPNC1-201ENST00000299954 CENPQQ7L2Z9 268 aaPredicted RBP22.57■■□□□ 1.2
PITPNC1-201ENST00000299954 HNRNPMP52272 730 aaKnown RBP eCLIP22.56■■□□□ 1.2
PITPNC1-201ENST00000299954 LMOD3Q0VAK6 560 aa22.56■■□□□ 1.2
PITPNC1-201ENST00000299954 TPM2P07951 284 aa22.56■■□□□ 1.2
PITPNC1-201ENST00000299954 TPM1P09493 284 aa22.55■■□□□ 1.2
PITPNC1-201ENST00000299954 ANO2Q9NQ90 1003 aa22.55■■□□□ 1.2
PITPNC1-201ENST00000299954 PANK3Q9H999 370 aa22.54■■□□□ 1.2
PITPNC1-201ENST00000299954 DIAPH3Q9NSV4 1193 aa22.54■■□□□ 1.2
PITPNC1-201ENST00000299954 CHMP4AQ9BY43 222 aa22.54■■□□□ 1.2
PITPNC1-201ENST00000299954 EIF2S2P20042 333 aaKnown RBP22.53■■□□□ 1.2
PITPNC1-201ENST00000299954 HOMER1Q86YM7 354 aa22.52■■□□□ 1.2
PITPNC1-201ENST00000299954 PDE3BQ13370 1112 aa22.52■■□□□ 1.2
PITPNC1-201ENST00000299954 CCDC70Q6NSX1 233 aa22.52■■□□□ 1.2
PITPNC1-201ENST00000299954 SKOR2Q2VWA4 1001 aaPredicted RBP22.52■■□□□ 1.19
PITPNC1-201ENST00000299954 GPS2Q13227 327 aa22.51■■□□□ 1.19
PITPNC1-201ENST00000299954 RRP1P56182 461 aaKnown RBP22.51■■□□□ 1.19
PITPNC1-201ENST00000299954 SYNE3Q6ZMZ3 975 aa22.5■■□□□ 1.19
PITPNC1-201ENST00000299954 ATP6V1DQ9Y5K8 247 aa22.5■■□□□ 1.19
PITPNC1-201ENST00000299954 APPP05067 770 aa22.49■■□□□ 1.19
PITPNC1-201ENST00000299954 BICD2Q8TD16 824 aa22.49■■□□□ 1.19
PITPNC1-201ENST00000299954 ZKSCAN2Q63HK3 967 aa22.49■■□□□ 1.19
PITPNC1-201ENST00000299954 MYBBP1AQ9BQG0 1328 aaKnown RBP22.48■■□□□ 1.19
PITPNC1-201ENST00000299954 ANKRD30AQ9BXX3 1397 aa22.47■■□□□ 1.19
PITPNC1-201ENST00000299954 TCEAL9Q9UHQ7 104 aa22.47■■□□□ 1.19
PITPNC1-201ENST00000299954 TRIM29Q14134 588 aa22.47■■□□□ 1.19
PITPNC1-201ENST00000299954 KIF15Q9NS87 1388 aa22.47■■□□□ 1.19
PITPNC1-201ENST00000299954 ST20-MTHFSA0A0A6YYL1 179 aa22.46■■□□□ 1.19
PITPNC1-201ENST00000299954 DHX16O60231 1041 aaKnown RBP22.46■■□□□ 1.19
PITPNC1-201ENST00000299954 VPS8Q8N3P4 1428 aa22.45■■□□□ 1.19
PITPNC1-201ENST00000299954 MSH5O43196 834 aa22.45■■□□□ 1.18
PITPNC1-201ENST00000299954 VPS37CA5D8V6 355 aaPredicted RBP22.45■■□□□ 1.18
PITPNC1-201ENST00000299954 KDM4AO75164 1064 aa22.45■■□□□ 1.18
PITPNC1-201ENST00000299954 C1orf141Q5JVX7 400 aa22.44■■□□□ 1.18
PITPNC1-201ENST00000299954 C9orf78Q9NZ63 289 aaPredicted RBP22.43■■□□□ 1.18
PITPNC1-201ENST00000299954 RB1CC1Q8TDY2 1594 aa22.43■■□□□ 1.18
PITPNC1-201ENST00000299954 SAMD1Q6SPF0 538 aaPredicted RBP22.42■■□□□ 1.18
PITPNC1-201ENST00000299954 EID1Q9Y6B2 187 aa22.42■■□□□ 1.18
PITPNC1-201ENST00000299954 WASHC2CQ9Y4E1 1318 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms