RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 HSCBQ8IWL3 235 aa18.85■□□□□ 0.61
CDH23-202ENST00000299366 ERICH3Q5RHP9 1530 aa18.84■□□□□ 0.61
CDH23-202ENST00000299366 CENPJQ9HC77 1338 aaPredicted RBP18.84■□□□□ 0.61
CDH23-202ENST00000299366 CCDC144AA2RUR9 1427 aa18.84■□□□□ 0.61
CDH23-202ENST00000299366 MYOM3Q5VTT5 1437 aa18.84■□□□□ 0.61
CDH23-202ENST00000299366 KANK1Q14678 1352 aa18.84■□□□□ 0.61
CDH23-202ENST00000299366 BICRAQ9NZM4 1560 aa18.84■□□□□ 0.61
CDH23-202ENST00000299366 CNTLNQ9NXG0 1405 aa18.84■□□□□ 0.61
CDH23-202ENST00000299366 ADAMTS8Q9UP79 889 aa18.83■□□□□ 0.6
CDH23-202ENST00000299366 NOL8Q76FK4 1167 aaKnown RBP18.82■□□□□ 0.6
CDH23-202ENST00000299366 CUX1P39880 1505 aa18.82■□□□□ 0.6
CDH23-202ENST00000299366 DNTTIP2Q5QJE6 756 aaKnown RBP18.82■□□□□ 0.6
CDH23-202ENST00000299366 NCOA2Q15596 1464 aa18.81■□□□□ 0.6
CDH23-202ENST00000299366 BRPF3Q9ULD4 1205 aa18.81■□□□□ 0.6
CDH23-202ENST00000299366 GAPVD1Q14C86 1478 aa18.8■□□□□ 0.6
CDH23-202ENST00000299366 FOXD4L5Q5VV16 416 aaPredicted RBP18.79■□□□□ 0.6
CDH23-202ENST00000299366 FOXD4L4Q8WXT5 416 aaPredicted RBP18.79■□□□□ 0.6
CDH23-202ENST00000299366 TOP2BQ02880 1626 aa18.79■□□□□ 0.6
CDH23-202ENST00000299366 TIAM1Q13009 1591 aa18.79■□□□□ 0.6
CDH23-202ENST00000299366 PDE3BQ13370 1112 aa18.78■□□□□ 0.6
CDH23-202ENST00000299366 TMEM132EQ6IEE7 984 aa18.78■□□□□ 0.6
CDH23-202ENST00000299366 NCAPD3P42695 1498 aa18.78■□□□□ 0.6
CDH23-202ENST00000299366 OS9Q13438 667 aaPredicted RBP18.78■□□□□ 0.6
CDH23-202ENST00000299366 PANK1Q8TE04 598 aa18.78■□□□□ 0.6
CDH23-202ENST00000299366 WASHC2CQ9Y4E1 1318 aa18.78■□□□□ 0.6
CDH23-202ENST00000299366 RWDD1Q9H446 243 aaPredicted RBP18.77■□□□□ 0.6
CDH23-202ENST00000299366 SLC4A10Q6U841 1118 aa18.77■□□□□ 0.59
CDH23-202ENST00000299366 AFAP1Q8N556 730 aa18.76■□□□□ 0.59
CDH23-202ENST00000299366 FOXD4L6Q3SYB3 417 aaPredicted RBP18.75■□□□□ 0.59
CDH23-202ENST00000299366 FOXD4L3Q6VB84 417 aaPredicted RBP18.75■□□□□ 0.59
CDH23-202ENST00000299366 MINK1Q8N4C8 1332 aaPredicted RBP18.75■□□□□ 0.59
CDH23-202ENST00000299366 GLIPR1L2Q4G1C9 344 aa18.74■□□□□ 0.59
CDH23-202ENST00000299366 LTV1Q96GA3 475 aaPredicted RBP18.73■□□□□ 0.59
CDH23-202ENST00000299366 NAP1L2Q9ULW6 460 aaPredicted RBP18.73■□□□□ 0.59
CDH23-202ENST00000299366 CASC1Q6TDU7 716 aa18.73■□□□□ 0.59
CDH23-202ENST00000299366 KCNJ4P48050 445 aa18.72■□□□□ 0.59
CDH23-202ENST00000299366 HDGFL2Q7Z4V5 671 aaPredicted RBP18.72■□□□□ 0.59
CDH23-202ENST00000299366 FAM161AQ3B820 660 aa18.71■□□□□ 0.59
CDH23-202ENST00000299366 MS4A1P11836 297 aa18.7■□□□□ 0.58
CDH23-202ENST00000299366 CFAP70Q5T0N1 1121 aa18.7■□□□□ 0.58
CDH23-202ENST00000299366 PTPRGP23470 1445 aa18.7■□□□□ 0.58
CDH23-202ENST00000299366 PNISRQ8TF01 805 aaKnown RBP18.7■□□□□ 0.58
CDH23-202ENST00000299366 GSE1Q14687 1217 aa18.69■□□□□ 0.58
CDH23-202ENST00000299366 ANKRD50Q9ULJ7 1429 aa18.69■□□□□ 0.58
CDH23-202ENST00000299366 CENPQQ7L2Z9 268 aaPredicted RBP18.68■□□□□ 0.58
CDH23-202ENST00000299366 CASKIN1Q8WXD9 1431 aa18.68■□□□□ 0.58
CDH23-202ENST00000299366 IPO8O15397 1037 aaKnown RBP18.68■□□□□ 0.58
CDH23-202ENST00000299366 BCAR3O75815 825 aa18.67■□□□□ 0.58
CDH23-202ENST00000299366 GGNBP2Q9H3C7 697 aa18.67■□□□□ 0.58
CDH23-202ENST00000299366 NAIPQ13075 1403 aa18.66■□□□□ 0.58
CDH23-202ENST00000299366 ANKRD45Q5TZF3 282 aa18.66■□□□□ 0.58
CDH23-202ENST00000299366 HAP1P54257 671 aaPredicted RBP18.66■□□□□ 0.58
CDH23-202ENST00000299366 NFKBIBQ15653 356 aa18.66■□□□□ 0.58
CDH23-202ENST00000299366 NECTIN2Q92692 538 aa18.66■□□□□ 0.58
CDH23-202ENST00000299366 RTF1Q92541 710 aaKnown RBP18.65■□□□□ 0.58
CDH23-202ENST00000299366 PTPRKQ15262 1439 aa18.65■□□□□ 0.58
CDH23-202ENST00000299366 FGD1P98174 961 aa18.65■□□□□ 0.58
CDH23-202ENST00000299366 PMFBP1Q8TBY8 1022 aa18.65■□□□□ 0.58
CDH23-202ENST00000299366 HFM1A2PYH4 1435 aa18.64■□□□□ 0.57
CDH23-202ENST00000299366 PRG4Q92954 1404 aaPredicted RBP18.64■□□□□ 0.57
CDH23-202ENST00000299366 HMOX1P09601 288 aa18.63■□□□□ 0.57
CDH23-202ENST00000299366 LNPKQ9C0E8 428 aa18.62■□□□□ 0.57
CDH23-202ENST00000299366 E9PSI1 815 aa18.62■□□□□ 0.57
CDH23-202ENST00000299366 TRIM6-TRIM34B2RNG4 842 aa18.61■□□□□ 0.57
CDH23-202ENST00000299366 RSPH4AQ5TD94 716 aa18.61■□□□□ 0.57
CDH23-202ENST00000299366 CABP2Q9NPB3 220 aa18.61■□□□□ 0.57
CDH23-202ENST00000299366 USP35Q9P2H5 1018 aa18.61■□□□□ 0.57
CDH23-202ENST00000299366 BACH2Q9BYV9 841 aa18.61■□□□□ 0.57
CDH23-202ENST00000299366 ZNF330Q9Y3S2 320 aaPredicted RBP18.61■□□□□ 0.57
CDH23-202ENST00000299366 C20orf194Q5TEA3 1177 aa18.6■□□□□ 0.57
CDH23-202ENST00000299366 SLC12A5Q9H2X9 1139 aa18.6■□□□□ 0.57
CDH23-202ENST00000299366 AMER1Q5JTC6 1135 aaPredicted RBP18.6■□□□□ 0.57
CDH23-202ENST00000299366 TERF2IPQ9NYB0 399 aa18.6■□□□□ 0.57
CDH23-202ENST00000299366 MTHFSP49914 203 aa18.59■□□□□ 0.57
CDH23-202ENST00000299366 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
CDH23-202ENST00000299366 PCF11O94913 1555 aaKnown RBP18.59■□□□□ 0.57
CDH23-202ENST00000299366 PRDM2Q13029 1718 aa18.58■□□□□ 0.57
CDH23-202ENST00000299366 UNC13AQ9UPW8 1703 aa18.58■□□□□ 0.57
CDH23-202ENST00000299366 SMG6Q86US8 1419 aaKnown RBP18.58■□□□□ 0.56
CDH23-202ENST00000299366 FRAT2O75474 233 aaPredicted RBP18.58■□□□□ 0.56
CDH23-202ENST00000299366 GOLGA6L3A6NEY3 463 aa18.57■□□□□ 0.56
CDH23-202ENST00000299366 ZKSCAN2Q63HK3 967 aa18.57■□□□□ 0.56
CDH23-202ENST00000299366 PPP2R1AP30153 589 aa18.57■□□□□ 0.56
CDH23-202ENST00000299366 RIPK4P57078 832 aa18.57■□□□□ 0.56
CDH23-202ENST00000299366 L1TD1Q5T7N2 865 aaKnown RBP18.57■□□□□ 0.56
CDH23-202ENST00000299366 EIF3AQ14152 1382 aaKnown RBP18.57■□□□□ 0.56
CDH23-202ENST00000299366 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
CDH23-202ENST00000299366 TCP11L2Q8N4U5 519 aa18.57■□□□□ 0.56
CDH23-202ENST00000299366 TSR2Q969E8 191 aaKnown RBP18.57■□□□□ 0.56
CDH23-202ENST00000299366 CCDC9Q9Y3X0 531 aaKnown RBP18.56■□□□□ 0.56
CDH23-202ENST00000299366 ZNF428Q96B54 188 aa18.55■□□□□ 0.56
CDH23-202ENST00000299366 POLA1P09884 1462 aaPredicted RBP18.55■□□□□ 0.56
CDH23-202ENST00000299366 CYB5RLQ6IPT4 315 aa18.54■□□□□ 0.56
CDH23-202ENST00000299366 CDK13Q14004 1512 aaKnown RBP18.53■□□□□ 0.56
CDH23-202ENST00000299366 CHMP4BQ9H444 224 aaKnown RBP18.53■□□□□ 0.56
CDH23-202ENST00000299366 CGNL1Q0VF96 1302 aa18.53■□□□□ 0.56
CDH23-202ENST00000299366 MSNP26038 577 aaKnown RBP18.53■□□□□ 0.56
CDH23-202ENST00000299366 GBP4Q96PP9 640 aa18.52■□□□□ 0.56
CDH23-202ENST00000299366 FYCO1Q9BQS8 1478 aa18.52■□□□□ 0.56
CDH23-202ENST00000299366 DZIP1LQ8IYY4 767 aaKnown RBP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms