RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 CROCC2H7BZ55 1655 aa9.23□□□□□ -0.93
SSX3-201ENST00000298396 SYCP2Q9BX26 1530 aa9.22□□□□□ -0.93
SSX3-201ENST00000298396 AKNAQ7Z591 1439 aa9.22□□□□□ -0.93
SSX3-201ENST00000298396 CAMSAP2Q08AD1 1489 aa9.21□□□□□ -0.93
SSX3-201ENST00000298396 DCAF8Q5TAQ9 597 aa9.21□□□□□ -0.94
SSX3-201ENST00000298396 CCDC61Q9Y6R9 512 aa9.21□□□□□ -0.94
SSX3-201ENST00000298396 ADGRL1O94910 1474 aa9.21□□□□□ -0.94
SSX3-201ENST00000298396 C19orf67A6NJJ6 358 aa9.2□□□□□ -0.94
SSX3-201ENST00000298396 ZNF644Q9H582 1327 aaPredicted RBP9.2□□□□□ -0.94
SSX3-201ENST00000298396 FGD6Q6ZV73 1430 aa9.2□□□□□ -0.94
SSX3-201ENST00000298396 TCOF1Q13428 1488 aaKnown RBP9.2□□□□□ -0.94
SSX3-201ENST00000298396 KDM5CP41229 1560 aa9.2□□□□□ -0.94
SSX3-201ENST00000298396 SIGLEC1Q9BZZ2 1709 aa9.19□□□□□ -0.94
SSX3-201ENST00000298396 RGL2O15211 777 aa9.19□□□□□ -0.94
SSX3-201ENST00000298396 RNF25Q96BH1 459 aaPredicted RBP9.19□□□□□ -0.94
SSX3-201ENST00000298396 MBD5Q9P267 1494 aa9.19□□□□□ -0.94
SSX3-201ENST00000298396 ARHGEF5Q12774 1597 aa9.19□□□□□ -0.94
SSX3-201ENST00000298396 KIDINS220Q9ULH0 1771 aa9.19□□□□□ -0.94
SSX3-201ENST00000298396 DNMT1P26358 1616 aaKnown RBP9.18□□□□□ -0.94
SSX3-201ENST00000298396 ZMYM4Q5VZL5 1548 aa9.18□□□□□ -0.94
SSX3-201ENST00000298396 POGZQ7Z3K3 1410 aa9.18□□□□□ -0.94
SSX3-201ENST00000298396 SP7Q8TDD2 431 aaPredicted RBP9.18□□□□□ -0.94
SSX3-201ENST00000298396 MIA2Q96PC5 1412 aa9.18□□□□□ -0.94
SSX3-201ENST00000298396 TRAPPC8Q9Y2L5 1435 aa9.18□□□□□ -0.94
SSX3-201ENST00000298396 INO80Q9ULG1 1556 aaPredicted RBP9.17□□□□□ -0.94
SSX3-201ENST00000298396 SCAPERQ9BY12 1400 aa9.17□□□□□ -0.94
SSX3-201ENST00000298396 ADGBQ8N7X0 1667 aa9.16□□□□□ -0.94
SSX3-201ENST00000298396 ABCA6Q8N139 1617 aa9.16□□□□□ -0.94
SSX3-201ENST00000298396 HECW2Q9P2P5 1572 aa9.16□□□□□ -0.94
SSX3-201ENST00000298396 KIAA1107Q9UPP5 1409 aa9.16□□□□□ -0.94
SSX3-201ENST00000298396 EFCAB2Q5VUJ9 269 aa9.16□□□□□ -0.94
SSX3-201ENST00000298396 CFDP1Q9UEE9 299 aaPredicted RBP9.16□□□□□ -0.94
SSX3-201ENST00000298396 DENND4BO75064 1496 aaPredicted RBP9.15□□□□□ -0.94
SSX3-201ENST00000298396 RRBP1Q9P2E9 1410 aaKnown RBP9.15□□□□□ -0.94
SSX3-201ENST00000298396 TSPYL2Q9H2G4 693 aaPredicted RBP9.15□□□□□ -0.94
SSX3-201ENST00000298396 ZFYVE16Q7Z3T8 1539 aa9.15□□□□□ -0.95
SSX3-201ENST00000298396 ARHGEF40Q8TER5 1519 aa9.15□□□□□ -0.95
SSX3-201ENST00000298396 PLEKHH2Q8IVE3 1493 aa9.15□□□□□ -0.95
SSX3-201ENST00000298396 RAPGEF3O95398 923 aa9.14□□□□□ -0.95
SSX3-201ENST00000298396 CD44P16070 742 aaKnown RBP9.14□□□□□ -0.95
SSX3-201ENST00000298396 ZNF777Q9ULD5 760 aaPredicted RBP9.14□□□□□ -0.95
SSX3-201ENST00000298396 DIP2CQ9Y2E4 1556 aa9.14□□□□□ -0.95
SSX3-201ENST00000298396 MAST1Q9Y2H9 1570 aa9.14□□□□□ -0.95
SSX3-201ENST00000298396 ZNF518AQ6AHZ1 1483 aa9.14□□□□□ -0.95
SSX3-201ENST00000298396 PAK3O75914 559 aaPredicted RBP9.13□□□□□ -0.95
SSX3-201ENST00000298396 HNRNPMP52272 730 aaKnown RBP eCLIP9.13□□□□□ -0.95
SSX3-201ENST00000298396 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
SSX3-201ENST00000298396 CCDC141Q6ZP82 1450 aa9.13□□□□□ -0.95
SSX3-201ENST00000298396 ATP7AQ04656 1500 aa9.12□□□□□ -0.95
SSX3-201ENST00000298396 AFAP1Q8N556 730 aa9.12□□□□□ -0.95
SSX3-201ENST00000298396 SGIP1Q9BQI5 828 aa9.12□□□□□ -0.95
SSX3-201ENST00000298396 ABCC5O15440 1437 aa9.12□□□□□ -0.95
SSX3-201ENST00000298396 PTPRKQ15262 1439 aa9.12□□□□□ -0.95
SSX3-201ENST00000298396 YEATS2Q9ULM3 1422 aa9.12□□□□□ -0.95
SSX3-201ENST00000298396 PLXNC1O60486 1568 aa9.12□□□□□ -0.95
SSX3-201ENST00000298396 MLH3Q9UHC1 1453 aa9.11□□□□□ -0.95
SSX3-201ENST00000298396 RIOK3O14730 519 aaKnown RBP9.11□□□□□ -0.95
SSX3-201ENST00000298396 DAPK1P53355 1430 aa9.11□□□□□ -0.95
SSX3-201ENST00000298396 SHANK2Q9UPX8 1470 aa9.1□□□□□ -0.95
SSX3-201ENST00000298396 PYGBP11216 843 aa9.1□□□□□ -0.95
SSX3-201ENST00000298396 KIF12Q96FN5 646 aa9.1□□□□□ -0.95
SSX3-201ENST00000298396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.1□□□□□ -0.95
SSX3-201ENST00000298396 MAGI2Q86UL8 1455 aa9.08□□□□□ -0.96
SSX3-201ENST00000298396 BCORL1Q5H9F3 1711 aa9.08□□□□□ -0.96
SSX3-201ENST00000298396 REREQ9P2R6 1566 aa9.08□□□□□ -0.96
SSX3-201ENST00000298396 C9orf84Q5VXU9 1444 aa9.08□□□□□ -0.96
SSX3-201ENST00000298396 ZRANB1Q9UGI0 708 aa9.08□□□□□ -0.96
SSX3-201ENST00000298396 ADGRL2O95490 1459 aa9.08□□□□□ -0.96
SSX3-201ENST00000298396 GCC2Q8IWJ2 1684 aa9.07□□□□□ -0.96
SSX3-201ENST00000298396 RTEL1-TNFRSF6BF6WH68 1400 aa9.07□□□□□ -0.96
SSX3-201ENST00000298396 FAM50AQ14320 339 aaKnown RBP9.07□□□□□ -0.96
SSX3-201ENST00000298396 VGFO15240 615 aaPredicted RBP9.06□□□□□ -0.96
SSX3-201ENST00000298396 ZNF467Q7Z7K2 595 aaPredicted RBP9.06□□□□□ -0.96
SSX3-201ENST00000298396 HS6ST3Q8IZP7 471 aa9.06□□□□□ -0.96
SSX3-201ENST00000298396 ATP10AO60312 1499 aa9.05□□□□□ -0.96
SSX3-201ENST00000298396 MROH1Q8NDA8 1641 aa9.05□□□□□ -0.96
SSX3-201ENST00000298396 SPAG9O60271 1321 aaKnown RBP9.05□□□□□ -0.96
SSX3-201ENST00000298396 TAOK2Q9UL54 1235 aa9.04□□□□□ -0.96
SSX3-201ENST00000298396 RNF17Q9BXT8 1623 aaKnown RBP9.04□□□□□ -0.96
SSX3-201ENST00000298396 EIF2AK4Q9P2K8 1649 aaKnown RBP9.04□□□□□ -0.96
SSX3-201ENST00000298396 NCOA1Q15788 1441 aa9.04□□□□□ -0.96
SSX3-201ENST00000298396 DEPDC5O75140 1603 aa9.03□□□□□ -0.96
SSX3-201ENST00000298396 MAP3K13O43283 966 aa9.03□□□□□ -0.96
SSX3-201ENST00000298396 RSPH4AQ5TD94 716 aa9.03□□□□□ -0.96
SSX3-201ENST00000298396 PHF12Q96QT6 1004 aa9.03□□□□□ -0.96
SSX3-201ENST00000298396 AGLP35573 1532 aa9.03□□□□□ -0.96
SSX3-201ENST00000298396 ADAMTSL3P82987 1691 aa9.03□□□□□ -0.96
SSX3-201ENST00000298396 A2MP01023 1474 aa9.02□□□□□ -0.96
SSX3-201ENST00000298396 FER1L4A9Z1Z3 1794 aa9.02□□□□□ -0.97
SSX3-201ENST00000298396 DUOX2Q9NRD8 1548 aa9.02□□□□□ -0.97
SSX3-201ENST00000298396 EVX2Q03828 476 aa9.02□□□□□ -0.97
SSX3-201ENST00000298396 CHIC2Q9UKJ5 165 aa9.02□□□□□ -0.97
SSX3-201ENST00000298396 CEP152O94986 1710 aa9.02□□□□□ -0.97
SSX3-201ENST00000298396 CLCN6P51797 869 aa9.01□□□□□ -0.97
SSX3-201ENST00000298396 IFNL1Q8IU54 200 aa9.01□□□□□ -0.97
SSX3-201ENST00000298396 MADDQ8WXG6 1647 aa9.01□□□□□ -0.97
SSX3-201ENST00000298396 ROCK1Q13464 1354 aa9□□□□□ -0.97
SSX3-201ENST00000298396 KIF15Q9NS87 1388 aa9□□□□□ -0.97
SSX3-201ENST00000298396 CFAP65Q6ZU64 1925 aaKnown RBP9□□□□□ -0.97
SSX3-201ENST00000298396 ITGAEP38570 1179 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms