RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 ERICH6Q7L0X2 663 aa18.26■□□□□ 0.51
TTC39B-201ENST00000297615 SCAPERQ9BY12 1400 aa18.26■□□□□ 0.51
TTC39B-201ENST00000297615 CDCA7LQ96GN5 454 aa18.25■□□□□ 0.51
TTC39B-201ENST00000297615 SPATA31E1Q6ZUB1 1445 aa18.25■□□□□ 0.51
TTC39B-201ENST00000297615 CDC42BPAQ5VT25 1732 aa18.24■□□□□ 0.51
TTC39B-201ENST00000297615 PPP4R2Q9NY27 417 aa18.24■□□□□ 0.51
TTC39B-201ENST00000297615 CFAP70Q5T0N1 1121 aa18.24■□□□□ 0.51
TTC39B-201ENST00000297615 CCDC141Q6ZP82 1450 aa18.23■□□□□ 0.51
TTC39B-201ENST00000297615 PLIN1O60240 522 aa18.23■□□□□ 0.51
TTC39B-201ENST00000297615 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
TTC39B-201ENST00000297615 TMEM132EQ6IEE7 984 aa18.22■□□□□ 0.51
TTC39B-201ENST00000297615 ZBED9Q6R2W3 1325 aa18.21■□□□□ 0.51
TTC39B-201ENST00000297615 TTC37Q6PGP7 1564 aa18.21■□□□□ 0.51
TTC39B-201ENST00000297615 SKAP1Q86WV1 359 aa18.21■□□□□ 0.51
TTC39B-201ENST00000297615 MSH5O43196 834 aa18.2■□□□□ 0.5
TTC39B-201ENST00000297615 SAMD9LQ8IVG5 1584 aa18.2■□□□□ 0.5
TTC39B-201ENST00000297615 MLECQ14165 292 aa18.19■□□□□ 0.5
TTC39B-201ENST00000297615 PNISRQ8TF01 805 aaKnown RBP18.19■□□□□ 0.5
TTC39B-201ENST00000297615 DHX29Q7Z478 1369 aaKnown RBP18.19■□□□□ 0.5
TTC39B-201ENST00000297615 CCDC146Q8IYE0 955 aa18.19■□□□□ 0.5
TTC39B-201ENST00000297615 DISP3Q9P2K9 1392 aa18.19■□□□□ 0.5
TTC39B-201ENST00000297615 TRAK1Q9UPV9 953 aa18.19■□□□□ 0.5
TTC39B-201ENST00000297615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.18■□□□□ 0.5
TTC39B-201ENST00000297615 RSPH4AQ5TD94 716 aa18.18■□□□□ 0.5
TTC39B-201ENST00000297615 CCDC136Q96JN2 1154 aa18.17■□□□□ 0.5
TTC39B-201ENST00000297615 BCORL1Q5H9F3 1711 aa18.17■□□□□ 0.5
TTC39B-201ENST00000297615 NEUROD2Q15784 382 aa18.16■□□□□ 0.5
TTC39B-201ENST00000297615 OSCARQ8IYS5 282 aa18.16■□□□□ 0.5
TTC39B-201ENST00000297615 STK26Q9P289 416 aa18.16■□□□□ 0.5
TTC39B-201ENST00000297615 ITSN2Q9NZM3 1697 aa18.16■□□□□ 0.5
TTC39B-201ENST00000297615 FAM135AQ9P2D6 1515 aa18.16■□□□□ 0.5
TTC39B-201ENST00000297615 PLA2R1Q13018 1463 aa18.15■□□□□ 0.5
TTC39B-201ENST00000297615 TMF1P82094 1093 aa18.14■□□□□ 0.49
TTC39B-201ENST00000297615 ADGRL2O95490 1459 aa18.14■□□□□ 0.49
TTC39B-201ENST00000297615 CFAP65Q6ZU64 1925 aaKnown RBP18.13■□□□□ 0.49
TTC39B-201ENST00000297615 ADGRF5Q8IZF2 1346 aa18.12■□□□□ 0.49
TTC39B-201ENST00000297615 TESK2Q96S53 571 aa18.12■□□□□ 0.49
TTC39B-201ENST00000297615 KNSTRNQ9Y448 316 aa18.12■□□□□ 0.49
TTC39B-201ENST00000297615 CDC42BPBQ9Y5S2 1711 aa18.11■□□□□ 0.49
TTC39B-201ENST00000297615 NUDCQ9Y266 331 aa18.1■□□□□ 0.49
TTC39B-201ENST00000297615 PLCH2O75038 1416 aa18.08■□□□□ 0.48
TTC39B-201ENST00000297615 NPM2Q86SE8 214 aaKnown RBP18.08■□□□□ 0.48
TTC39B-201ENST00000297615 ADAMTS8Q9UP79 889 aa18.08■□□□□ 0.48
TTC39B-201ENST00000297615 MYBBP1AQ9BQG0 1328 aaKnown RBP18.07■□□□□ 0.48
TTC39B-201ENST00000297615 EXOC6Q8TAG9 804 aa18.07■□□□□ 0.48
TTC39B-201ENST00000297615 WASHC2CQ9Y4E1 1318 aa18.06■□□□□ 0.48
TTC39B-201ENST00000297615 A2MP01023 1474 aa18.06■□□□□ 0.48
TTC39B-201ENST00000297615 KTN1Q86UP2 1357 aaKnown RBP18.06■□□□□ 0.48
TTC39B-201ENST00000297615 ABCC2Q92887 1545 aa18.05■□□□□ 0.48
TTC39B-201ENST00000297615 PER1O15534 1290 aaPredicted RBP18.05■□□□□ 0.48
TTC39B-201ENST00000297615 PRAG1Q86YV5 1406 aa18.04■□□□□ 0.48
TTC39B-201ENST00000297615 NLRP13Q86W25 1043 aa18.03■□□□□ 0.48
TTC39B-201ENST00000297615 NBR1Q14596 966 aa18.03■□□□□ 0.48
TTC39B-201ENST00000297615 RRP7AQ9Y3A4 280 aaKnown RBP18.03■□□□□ 0.48
TTC39B-201ENST00000297615 ADGBQ8N7X0 1667 aa18.03■□□□□ 0.48
TTC39B-201ENST00000297615 UGGT1Q9NYU2 1555 aa18.02■□□□□ 0.47
TTC39B-201ENST00000297615 SLC12A5Q9H2X9 1139 aa18.02■□□□□ 0.47
TTC39B-201ENST00000297615 FANCAO15360 1455 aa18.01■□□□□ 0.47
TTC39B-201ENST00000297615 WDR43Q15061 677 aaKnown RBP eCLIP18.01■□□□□ 0.47
TTC39B-201ENST00000297615 RALBP1Q15311 655 aa18■□□□□ 0.47
TTC39B-201ENST00000297615 RALGAPBQ86X10 1494 aa18■□□□□ 0.47
TTC39B-201ENST00000297615 ASXL2Q76L83 1435 aa18■□□□□ 0.47
TTC39B-201ENST00000297615 ADCY10Q96PN6 1610 aa17.99■□□□□ 0.47
TTC39B-201ENST00000297615 RCAN3Q9UKA8 241 aa17.98■□□□□ 0.47
TTC39B-201ENST00000297615 CROCC2H7BZ55 1655 aa17.98■□□□□ 0.47
TTC39B-201ENST00000297615 SHANK2Q9UPX8 1470 aa17.97■□□□□ 0.47
TTC39B-201ENST00000297615 KDM5CP41229 1560 aa17.97■□□□□ 0.47
TTC39B-201ENST00000297615 ADGRL1O94910 1474 aa17.97■□□□□ 0.47
TTC39B-201ENST00000297615 ERBINQ96RT1 1412 aa17.97■□□□□ 0.47
TTC39B-201ENST00000297615 KANK1Q14678 1352 aa17.97■□□□□ 0.47
TTC39B-201ENST00000297615 FBXO31Q5XUX0 539 aaPredicted RBP17.97■□□□□ 0.47
TTC39B-201ENST00000297615 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
TTC39B-201ENST00000297615 C20orf194Q5TEA3 1177 aa17.97■□□□□ 0.47
TTC39B-201ENST00000297615 BCL11AQ9H165 835 aa17.96■□□□□ 0.47
TTC39B-201ENST00000297615 ZCCHC11Q5TAX3 1644 aaKnown RBP17.95■□□□□ 0.46
TTC39B-201ENST00000297615 PREX2Q70Z35 1606 aa17.95■□□□□ 0.46
TTC39B-201ENST00000297615 FBLN1P23142 703 aa17.95■□□□□ 0.46
TTC39B-201ENST00000297615 PPP2R1AP30153 589 aa17.95■□□□□ 0.46
TTC39B-201ENST00000297615 APAF1O14727 1248 aa17.94■□□□□ 0.46
TTC39B-201ENST00000297615 ERICH6BQ5W0A0 696 aa17.94■□□□□ 0.46
TTC39B-201ENST00000297615 SMG6Q86US8 1419 aaKnown RBP17.94■□□□□ 0.46
TTC39B-201ENST00000297615 UHRF1BP1Q6BDS2 1440 aa17.93■□□□□ 0.46
TTC39B-201ENST00000297615 CABP2Q9NPB3 220 aa17.93■□□□□ 0.46
TTC39B-201ENST00000297615 FAM69CQ0P6D2 419 aa17.93■□□□□ 0.46
TTC39B-201ENST00000297615 PPM1GO15355 546 aaPredicted RBP17.92■□□□□ 0.46
TTC39B-201ENST00000297615 PAK3O75914 559 aaPredicted RBP17.91■□□□□ 0.46
TTC39B-201ENST00000297615 CARD14Q9BXL6 1004 aa17.91■□□□□ 0.46
TTC39B-201ENST00000297615 NUTM2FA1L443 756 aa17.91■□□□□ 0.46
TTC39B-201ENST00000297615 FANCIQ9NVI1 1328 aa17.91■□□□□ 0.46
TTC39B-201ENST00000297615 WDR7Q9Y4E6 1490 aa17.89■□□□□ 0.45
TTC39B-201ENST00000297615 RRP1P56182 461 aaKnown RBP17.89■□□□□ 0.45
TTC39B-201ENST00000297615 BCL2L13Q9BXK5 485 aa17.89■□□□□ 0.45
TTC39B-201ENST00000297615 ARID4BQ4LE39 1312 aaPredicted RBP17.89■□□□□ 0.45
TTC39B-201ENST00000297615 CD109Q6YHK3 1445 aa17.89■□□□□ 0.45
TTC39B-201ENST00000297615 ARHGEF5Q12774 1597 aa17.89■□□□□ 0.45
TTC39B-201ENST00000297615 MINK1Q8N4C8 1332 aaPredicted RBP17.89■□□□□ 0.45
TTC39B-201ENST00000297615 KDM5DQ9BY66 1539 aa17.88■□□□□ 0.45
TTC39B-201ENST00000297615 CRBNQ96SW2 442 aa17.88■□□□□ 0.45
TTC39B-201ENST00000297615 SPINK5Q9NQ38 1064 aaPredicted RBP17.88■□□□□ 0.45
TTC39B-201ENST00000297615 MYO5CQ9NQX4 1742 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms