RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 GLI2P10070 1586 aa30.44■■■□□ 2.46
SOX17-201ENST00000297316 NEO1Q92859 1461 aa30.42■■■□□ 2.46
SOX17-201ENST00000297316 RAPGEF3O95398 923 aa30.41■■■□□ 2.46
SOX17-201ENST00000297316 KDM5CP41229 1560 aa30.41■■■□□ 2.46
SOX17-201ENST00000297316 TSPOAP1O95153 1857 aa30.4■■■□□ 2.46
SOX17-201ENST00000297316 DHX29Q7Z478 1369 aaKnown RBP30.37■■■□□ 2.45
SOX17-201ENST00000297316 NBPF8Q3BBV2 869 aa30.36■■■□□ 2.45
SOX17-201ENST00000297316 KIF3BO15066 747 aa30.36■■■□□ 2.45
SOX17-201ENST00000297316 DEPDC5O75140 1603 aa30.35■■■□□ 2.45
SOX17-201ENST00000297316 HECW2Q9P2P5 1572 aa30.34■■■□□ 2.45
SOX17-201ENST00000297316 PLA2R1Q13018 1463 aa30.34■■■□□ 2.45
SOX17-201ENST00000297316 MLH3Q9UHC1 1453 aa30.32■■■□□ 2.44
SOX17-201ENST00000297316 RICTORQ6R327 1708 aa30.3■■■□□ 2.44
SOX17-201ENST00000297316 ABCA6Q8N139 1617 aa30.29■■■□□ 2.44
SOX17-201ENST00000297316 EIF2AK4Q9P2K8 1649 aaKnown RBP30.29■■■□□ 2.44
SOX17-201ENST00000297316 PPRC1Q5VV67 1664 aaKnown RBP30.29■■■□□ 2.44
SOX17-201ENST00000297316 A2MP01023 1474 aa30.28■■■□□ 2.44
SOX17-201ENST00000297316 MROH1Q8NDA8 1641 aa30.28■■■□□ 2.44
SOX17-201ENST00000297316 E9PCH4 1651 aa30.28■■■□□ 2.44
SOX17-201ENST00000297316 FRMPD1Q5SYB0 1578 aa30.27■■■□□ 2.44
SOX17-201ENST00000297316 YTHDC1Q96MU7 727 aaKnown RBP30.26■■■□□ 2.43
SOX17-201ENST00000297316 CCDC144AA2RUR9 1427 aa30.25■■■□□ 2.43
SOX17-201ENST00000297316 DDX10Q13206 875 aaKnown RBP30.24■■■□□ 2.43
SOX17-201ENST00000297316 KIF13AQ9H1H9 1805 aa30.24■■■□□ 2.43
SOX17-201ENST00000297316 ZNF326Q5BKZ1 582 aaKnown RBP30.23■■■□□ 2.43
SOX17-201ENST00000297316 VWDEQ8N2E2 1590 aa30.23■■■□□ 2.43
SOX17-201ENST00000297316 PRDM15P57071 1507 aaPredicted RBP30.22■■■□□ 2.43
SOX17-201ENST00000297316 TET3O43151 1660 aa30.19■■■□□ 2.42
SOX17-201ENST00000297316 KANK1Q14678 1352 aa30.19■■■□□ 2.42
SOX17-201ENST00000297316 DIP2CQ9Y2E4 1556 aa30.18■■■□□ 2.42
SOX17-201ENST00000297316 HSPA5P11021 654 aaKnown RBP30.18■■■□□ 2.42
SOX17-201ENST00000297316 KDM2AQ9Y2K7 1162 aa30.18■■■□□ 2.42
SOX17-201ENST00000297316 YEATS2Q9ULM3 1422 aa30.17■■■□□ 2.42
SOX17-201ENST00000297316 RGL3Q3MIN7 710 aa30.16■■■□□ 2.42
SOX17-201ENST00000297316 ATP10AO60312 1499 aa30.16■■■□□ 2.42
SOX17-201ENST00000297316 DCAF11Q8TEB1 546 aa30.15■■■□□ 2.42
SOX17-201ENST00000297316 RNF17Q9BXT8 1623 aaKnown RBP30.14■■■□□ 2.42
SOX17-201ENST00000297316 CENPBP07199 599 aaPredicted RBP30.14■■■□□ 2.42
SOX17-201ENST00000297316 CEP152O94986 1710 aa30.14■■■□□ 2.42
SOX17-201ENST00000297316 GGT6Q6P531 493 aa30.13■■■□□ 2.41
SOX17-201ENST00000297316 SPHKAPQ2M3C7 1700 aa30.12■■■□□ 2.41
SOX17-201ENST00000297316 EIF4G2P78344 907 aaKnown RBP eCLIP30.11■■■□□ 2.41
SOX17-201ENST00000297316 UHRF1BP1Q6BDS2 1440 aa30.08■■■□□ 2.41
SOX17-201ENST00000297316 TRPM2O94759 1503 aa30.07■■■□□ 2.4
SOX17-201ENST00000297316 BCORL1Q5H9F3 1711 aa30.06■■■□□ 2.4
SOX17-201ENST00000297316 PTPRTO14522 1441 aa30.06■■■□□ 2.4
SOX17-201ENST00000297316 EFCAB6Q5THR3 1501 aa30.05■■■□□ 2.4
SOX17-201ENST00000297316 CFAP65Q6ZU64 1925 aaKnown RBP30.05■■■□□ 2.4
SOX17-201ENST00000297316 CLTCL1P53675 1640 aa30.05■■■□□ 2.4
SOX17-201ENST00000297316 ZMYM4Q5VZL5 1548 aa30.04■■■□□ 2.4
SOX17-201ENST00000297316 COL17A1Q9UMD9 1497 aaPredicted RBP30.01■■■□□ 2.39
SOX17-201ENST00000297316 LMTK2Q8IWU2 1503 aa30.01■■■□□ 2.39
SOX17-201ENST00000297316 UGGT1Q9NYU2 1555 aa30■■■□□ 2.39
SOX17-201ENST00000297316 SPATA31E1Q6ZUB1 1445 aa29.99■■■□□ 2.39
SOX17-201ENST00000297316 RALGAPBQ86X10 1494 aa29.99■■■□□ 2.39
SOX17-201ENST00000297316 WASHC2AQ641Q2 1341 aa29.98■■■□□ 2.39
SOX17-201ENST00000297316 C11orf95C9JLR9 678 aaPredicted RBP29.96■■■□□ 2.39
SOX17-201ENST00000297316 WASHC2CQ9Y4E1 1318 aa29.96■■■□□ 2.39
SOX17-201ENST00000297316 ABCC3O15438 1527 aa29.96■■■□□ 2.39
SOX17-201ENST00000297316 PRAG1Q86YV5 1406 aa29.95■■■□□ 2.39
SOX17-201ENST00000297316 PELP1Q8IZL8 1130 aaKnown RBP29.94■■■□□ 2.38
SOX17-201ENST00000297316 NPATQ14207 1427 aa29.94■■■□□ 2.38
SOX17-201ENST00000297316 USP47Q96K76 1375 aa29.93■■■□□ 2.38
SOX17-201ENST00000297316 TRPM1Q7Z4N2 1603 aa29.92■■■□□ 2.38
SOX17-201ENST00000297316 CARD11Q9BXL7 1154 aa29.91■■■□□ 2.38
SOX17-201ENST00000297316 CAMSAP1Q5T5Y3 1602 aa29.9■■■□□ 2.38
SOX17-201ENST00000297316 SIGLEC1Q9BZZ2 1709 aa29.88■■■□□ 2.37
SOX17-201ENST00000297316 NBPF1Q3BBV0 1214 aa29.87■■■□□ 2.37
SOX17-201ENST00000297316 ROCK2O75116 1388 aaKnown RBP29.86■■■□□ 2.37
SOX17-201ENST00000297316 KIF1BO60333 1816 aa29.84■■■□□ 2.37
SOX17-201ENST00000297316 CCDC7Q96M83 1385 aa29.83■■■□□ 2.37
SOX17-201ENST00000297316 GTF3C3Q9Y5Q9 886 aa29.83■■■□□ 2.37
SOX17-201ENST00000297316 MROH2AA6NES4 1674 aa29.83■■■□□ 2.37
SOX17-201ENST00000297316 ANP32CO43423 234 aa29.82■■■□□ 2.36
SOX17-201ENST00000297316 POLR1AO95602 1720 aaPredicted RBP29.8■■■□□ 2.36
SOX17-201ENST00000297316 ZC3H13Q5T200 1668 aaKnown RBP29.79■■■□□ 2.36
SOX17-201ENST00000297316 MADDQ8WXG6 1647 aa29.78■■■□□ 2.36
SOX17-201ENST00000297316 KIF7Q2M1P5 1343 aa29.78■■■□□ 2.36
SOX17-201ENST00000297316 REREQ9P2R6 1566 aa29.77■■■□□ 2.36
SOX17-201ENST00000297316 ST20-MTHFSA0A0A6YYL1 179 aa29.76■■■□□ 2.35
SOX17-201ENST00000297316 ARHGEF40Q8TER5 1519 aa29.76■■■□□ 2.35
SOX17-201ENST00000297316 CHGAP10645 457 aaKnown RBP29.75■■■□□ 2.35
SOX17-201ENST00000297316 CNTLNQ9NXG0 1405 aa29.74■■■□□ 2.35
SOX17-201ENST00000297316 SYNMO15061 1565 aa29.73■■■□□ 2.35
SOX17-201ENST00000297316 NOS1P29475 1434 aa29.73■■■□□ 2.35
SOX17-201ENST00000297316 MLECQ14165 292 aa29.73■■■□□ 2.35
SOX17-201ENST00000297316 GPRASP1Q5JY77 1395 aa29.73■■■□□ 2.35
SOX17-201ENST00000297316 NEURL4Q96JN8 1562 aa29.73■■■□□ 2.35
SOX17-201ENST00000297316 AGLP35573 1532 aa29.72■■■□□ 2.35
SOX17-201ENST00000297316 CCER2I3L3R5 266 aa29.71■■■□□ 2.35
SOX17-201ENST00000297316 TRHP20396 242 aaPredicted RBP29.71■■■□□ 2.35
SOX17-201ENST00000297316 ADGRB3O60242 1522 aa29.71■■■□□ 2.35
SOX17-201ENST00000297316 ARHGAP31Q2M1Z3 1444 aa29.7■■■□□ 2.35
SOX17-201ENST00000297316 IFT172Q9UG01 1749 aa29.7■■■□□ 2.34
SOX17-201ENST00000297316 POLR3GLQ9BT43 218 aa29.69■■■□□ 2.34
SOX17-201ENST00000297316 LAMC1P11047 1609 aa29.67■■■□□ 2.34
SOX17-201ENST00000297316 ADGRF5Q8IZF2 1346 aa29.66■■■□□ 2.34
SOX17-201ENST00000297316 PIK3C2BO00750 1634 aa29.66■■■□□ 2.34
SOX17-201ENST00000297316 CLTCQ00610 1675 aaKnown RBP29.65■■■□□ 2.34
SOX17-201ENST00000297316 PREX1Q8TCU6 1659 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms