RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 TCERG1O14776 1098 aaKnown RBP17.46■□□□□ 0.39
TNFRSF21-201ENST00000296861 FRAT1Q92837 279 aaPredicted RBP17.46■□□□□ 0.39
TNFRSF21-201ENST00000296861 SMG6Q86US8 1419 aaKnown RBP17.46■□□□□ 0.39
TNFRSF21-201ENST00000296861 DISP1Q96F81 1524 aa17.46■□□□□ 0.39
TNFRSF21-201ENST00000296861 PTPRGP23470 1445 aa17.46■□□□□ 0.39
TNFRSF21-201ENST00000296861 NUP153P49790 1475 aaKnown RBP17.45■□□□□ 0.38
TNFRSF21-201ENST00000296861 UGGT2Q9NYU1 1516 aa17.45■□□□□ 0.38
TNFRSF21-201ENST00000296861 SPRYD3Q8NCJ5 442 aa17.44■□□□□ 0.38
TNFRSF21-201ENST00000296861 RPRD2Q5VT52 1461 aaKnown RBP17.43■□□□□ 0.38
TNFRSF21-201ENST00000296861 ADAMTS8Q9UP79 889 aa17.43■□□□□ 0.38
TNFRSF21-201ENST00000296861 ANKRD50Q9ULJ7 1429 aa17.42■□□□□ 0.38
TNFRSF21-201ENST00000296861 MAGI1Q96QZ7 1491 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF21-201ENST00000296861 TMF1P82094 1093 aa17.41■□□□□ 0.38
TNFRSF21-201ENST00000296861 DENND4BO75064 1496 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF21-201ENST00000296861 DHX29Q7Z478 1369 aaKnown RBP17.4■□□□□ 0.38
TNFRSF21-201ENST00000296861 KIAA0556O60303 1618 aa17.4■□□□□ 0.38
TNFRSF21-201ENST00000296861 TROQ12816 1431 aaPredicted RBP17.39■□□□□ 0.38
TNFRSF21-201ENST00000296861 SLKQ9H2G2 1235 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF21-201ENST00000296861 BRPF3Q9ULD4 1205 aa17.38■□□□□ 0.37
TNFRSF21-201ENST00000296861 MIA2Q96PC5 1412 aa17.38■□□□□ 0.37
TNFRSF21-201ENST00000296861 RRP7AQ9Y3A4 280 aaKnown RBP17.38■□□□□ 0.37
TNFRSF21-201ENST00000296861 PPM1GO15355 546 aaPredicted RBP17.37■□□□□ 0.37
TNFRSF21-201ENST00000296861 BCL2L13Q9BXK5 485 aa17.37■□□□□ 0.37
TNFRSF21-201ENST00000296861 BACH2Q9BYV9 841 aa17.37■□□□□ 0.37
TNFRSF21-201ENST00000296861 KIAA1107Q9UPP5 1409 aa17.37■□□□□ 0.37
TNFRSF21-201ENST00000296861 CEP170Q5SW79 1584 aa17.35■□□□□ 0.37
TNFRSF21-201ENST00000296861 CLUAP1Q96AJ1 413 aa17.35■□□□□ 0.37
TNFRSF21-201ENST00000296861 KDM5BQ9UGL1 1544 aa17.35■□□□□ 0.37
TNFRSF21-201ENST00000296861 APAF1O14727 1248 aa17.34■□□□□ 0.37
TNFRSF21-201ENST00000296861 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
TNFRSF21-201ENST00000296861 DDRGK1Q96HY6 314 aa17.33■□□□□ 0.37
TNFRSF21-201ENST00000296861 RAPGEF6Q8TEU7 1601 aa17.33■□□□□ 0.37
TNFRSF21-201ENST00000296861 ARHGEF11O15085 1522 aa17.33■□□□□ 0.36
TNFRSF21-201ENST00000296861 BRD4O60885 1362 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF21-201ENST00000296861 CCDC144AA2RUR9 1427 aa17.3■□□□□ 0.36
TNFRSF21-201ENST00000296861 GOLGA2Q08379 1002 aa17.3■□□□□ 0.36
TNFRSF21-201ENST00000296861 BCAR3O75815 825 aa17.3■□□□□ 0.36
TNFRSF21-201ENST00000296861 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.36
TNFRSF21-201ENST00000296861 NFKBIBQ15653 356 aa17.29■□□□□ 0.36
TNFRSF21-201ENST00000296861 TEX14Q8IWB6 1497 aa17.29■□□□□ 0.36
TNFRSF21-201ENST00000296861 SPATA31E1Q6ZUB1 1445 aa17.29■□□□□ 0.36
TNFRSF21-201ENST00000296861 CAMSAP2Q08AD1 1489 aa17.29■□□□□ 0.36
TNFRSF21-201ENST00000296861 PDE3BQ13370 1112 aa17.28■□□□□ 0.36
TNFRSF21-201ENST00000296861 COG6Q9Y2V7 657 aa17.28■□□□□ 0.36
TNFRSF21-201ENST00000296861 NUTM2DQ5VT03 806 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF21-201ENST00000296861 GPATCH8Q9UKJ3 1502 aaKnown RBP17.28■□□□□ 0.36
TNFRSF21-201ENST00000296861 ATP10BO94823 1461 aa17.27■□□□□ 0.35
TNFRSF21-201ENST00000296861 FRAT2O75474 233 aaPredicted RBP17.27■□□□□ 0.35
TNFRSF21-201ENST00000296861 ROCK1Q13464 1354 aa17.26■□□□□ 0.35
TNFRSF21-201ENST00000296861 NUP160Q12769 1436 aa17.26■□□□□ 0.35
TNFRSF21-201ENST00000296861 TCOF1Q13428 1488 aaKnown RBP17.25■□□□□ 0.35
TNFRSF21-201ENST00000296861 GZF1Q9H116 711 aaPredicted RBP17.25■□□□□ 0.35
TNFRSF21-201ENST00000296861 PANK1Q8TE04 598 aa17.24■□□□□ 0.35
TNFRSF21-201ENST00000296861 C9orf84Q5VXU9 1444 aa17.23■□□□□ 0.35
TNFRSF21-201ENST00000296861 PZPP20742 1482 aa17.23■□□□□ 0.35
TNFRSF21-201ENST00000296861 KIF14Q15058 1648 aa17.23■□□□□ 0.35
TNFRSF21-201ENST00000296861 GSE1Q14687 1217 aa17.23■□□□□ 0.35
TNFRSF21-201ENST00000296861 DISP3Q9P2K9 1392 aa17.22■□□□□ 0.35
TNFRSF21-201ENST00000296861 PPP2R1AP30153 589 aa17.21■□□□□ 0.35
TNFRSF21-201ENST00000296861 MS4A1P11836 297 aa17.2■□□□□ 0.34
TNFRSF21-201ENST00000296861 FAM161AQ3B820 660 aa17.2■□□□□ 0.34
TNFRSF21-201ENST00000296861 ARID4BQ4LE39 1312 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF21-201ENST00000296861 RNF123Q5XPI4 1314 aa17.19■□□□□ 0.34
TNFRSF21-201ENST00000296861 USP35Q9P2H5 1018 aa17.18■□□□□ 0.34
TNFRSF21-201ENST00000296861 CENPQQ7L2Z9 268 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF21-201ENST00000296861 UPF2Q9HAU5 1272 aaKnown RBP17.18■□□□□ 0.34
TNFRSF21-201ENST00000296861 AFAP1Q8N556 730 aa17.17■□□□□ 0.34
TNFRSF21-201ENST00000296861 PER1O15534 1290 aaPredicted RBP17.17■□□□□ 0.34
TNFRSF21-201ENST00000296861 TRAK1Q9UPV9 953 aa17.17■□□□□ 0.34
TNFRSF21-201ENST00000296861 EFCAB2Q5VUJ9 269 aa17.16■□□□□ 0.34
TNFRSF21-201ENST00000296861 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
TNFRSF21-201ENST00000296861 U2SURPO15042 1029 aaKnown RBP17.15■□□□□ 0.34
TNFRSF21-201ENST00000296861 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
TNFRSF21-201ENST00000296861 KIF3BO15066 747 aa17.14■□□□□ 0.33
TNFRSF21-201ENST00000296861 CFAP70Q5T0N1 1121 aa17.14■□□□□ 0.33
TNFRSF21-201ENST00000296861 MORC1Q86VD1 984 aa17.14■□□□□ 0.33
TNFRSF21-201ENST00000296861 ARHGAP5Q13017 1502 aa17.13■□□□□ 0.33
TNFRSF21-201ENST00000296861 SLC24A1O60721 1099 aa17.13■□□□□ 0.33
TNFRSF21-201ENST00000296861 DUSP27Q5VZP5 1158 aa17.12■□□□□ 0.33
TNFRSF21-201ENST00000296861 FTSJ3Q8IY81 847 aaKnown RBP17.12■□□□□ 0.33
TNFRSF21-201ENST00000296861 CDCA8Q53HL2 280 aa17.11■□□□□ 0.33
TNFRSF21-201ENST00000296861 TESK2Q96S53 571 aa17.11■□□□□ 0.33
TNFRSF21-201ENST00000296861 CENPJQ9HC77 1338 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF21-201ENST00000296861 BCORL1Q5H9F3 1711 aa17.1■□□□□ 0.33
TNFRSF21-201ENST00000296861 PLEKHG5O94827 1062 aa17.1■□□□□ 0.33
TNFRSF21-201ENST00000296861 LRPPRCP42704 1394 aaKnown RBP17.1■□□□□ 0.33
TNFRSF21-201ENST00000296861 DMRT2Q9Y5R5 561 aa17.1■□□□□ 0.33
TNFRSF21-201ENST00000296861 DNMT1P26358 1616 aaKnown RBP17.09■□□□□ 0.33
TNFRSF21-201ENST00000296861 U2AF1L5P0DN76 240 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF21-201ENST00000296861 U2AF1Q01081 240 aaKnown RBP eCLIP17.09■□□□□ 0.33
TNFRSF21-201ENST00000296861 STK26Q9P289 416 aa17.09■□□□□ 0.33
TNFRSF21-201ENST00000296861 TNNQ9UQP3 1299 aa17.09■□□□□ 0.33
TNFRSF21-201ENST00000296861 PLEKHH1Q9ULM0 1364 aa17.09■□□□□ 0.33
TNFRSF21-201ENST00000296861 IGHDP01880 384 aa17.09■□□□□ 0.33
TNFRSF21-201ENST00000296861 MFAP1P55081 439 aaKnown RBP17.09■□□□□ 0.33
TNFRSF21-201ENST00000296861 BECN1Q14457 450 aa17.09■□□□□ 0.33
TNFRSF21-201ENST00000296861 GGT6Q6P531 493 aa17.09■□□□□ 0.33
TNFRSF21-201ENST00000296861 HSP90AA1P07900 732 aaKnown RBP17.08■□□□□ 0.33
TNFRSF21-201ENST00000296861 TMEM132EQ6IEE7 984 aa17.08■□□□□ 0.33
TNFRSF21-201ENST00000296861 FOXD4L1Q9NU39 408 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms