RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 PPRC1Q5VV67 1664 aaKnown RBP32.9■■■□□ 2.86
PTX3-201ENST00000295927 DHX29Q7Z478 1369 aaKnown RBP32.89■■■□□ 2.86
PTX3-201ENST00000295927 KIF13AQ9H1H9 1805 aa32.89■■■□□ 2.86
PTX3-201ENST00000295927 RICTORQ6R327 1708 aa32.88■■■□□ 2.85
PTX3-201ENST00000295927 EIF2AK4Q9P2K8 1649 aaKnown RBP32.88■■■□□ 2.85
PTX3-201ENST00000295927 DEPDC5O75140 1603 aa32.87■■■□□ 2.85
PTX3-201ENST00000295927 RAPGEF3O95398 923 aa32.86■■■□□ 2.85
PTX3-201ENST00000295927 TEX14Q8IWB6 1497 aa32.81■■■□□ 2.84
PTX3-201ENST00000295927 A2MP01023 1474 aa32.8■■■□□ 2.84
PTX3-201ENST00000295927 ABCA6Q8N139 1617 aa32.8■■■□□ 2.84
PTX3-201ENST00000295927 L3MBTL2Q969R5 705 aa32.79■■■□□ 2.84
PTX3-201ENST00000295927 KIF3BO15066 747 aa32.78■■■□□ 2.84
PTX3-201ENST00000295927 FRMPD1Q5SYB0 1578 aa32.77■■■□□ 2.84
PTX3-201ENST00000295927 MROH1Q8NDA8 1641 aa32.73■■■□□ 2.83
PTX3-201ENST00000295927 VWDEQ8N2E2 1590 aa32.73■■■□□ 2.83
PTX3-201ENST00000295927 PRDM15P57071 1507 aaPredicted RBP32.72■■■□□ 2.83
PTX3-201ENST00000295927 DIP2CQ9Y2E4 1556 aa32.71■■■□□ 2.83
PTX3-201ENST00000295927 KANK1Q14678 1352 aa32.7■■■□□ 2.83
PTX3-201ENST00000295927 RNF17Q9BXT8 1623 aaKnown RBP32.68■■■□□ 2.82
PTX3-201ENST00000295927 E9PCH4 1651 aa32.68■■■□□ 2.82
PTX3-201ENST00000295927 PLA2R1Q13018 1463 aa32.68■■■□□ 2.82
PTX3-201ENST00000295927 DIEXFQ68CQ4 756 aaKnown RBP32.68■■■□□ 2.82
PTX3-201ENST00000295927 TET3O43151 1660 aa32.68■■■□□ 2.82
PTX3-201ENST00000295927 ZMYM4Q5VZL5 1548 aa32.67■■■□□ 2.82
PTX3-201ENST00000295927 BCORL1Q5H9F3 1711 aa32.67■■■□□ 2.82
PTX3-201ENST00000295927 ATP10AO60312 1499 aa32.63■■■□□ 2.81
PTX3-201ENST00000295927 YEATS2Q9ULM3 1422 aa32.63■■■□□ 2.81
PTX3-201ENST00000295927 CCDC144AA2RUR9 1427 aa32.62■■■□□ 2.81
PTX3-201ENST00000295927 CEP152O94986 1710 aa32.56■■■□□ 2.8
PTX3-201ENST00000295927 SPHKAPQ2M3C7 1700 aa32.55■■■□□ 2.8
PTX3-201ENST00000295927 NBPF8Q3BBV2 869 aa32.55■■■□□ 2.8
PTX3-201ENST00000295927 LMTK2Q8IWU2 1503 aa32.54■■■□□ 2.8
PTX3-201ENST00000295927 EFCAB6Q5THR3 1501 aa32.52■■■□□ 2.8
PTX3-201ENST00000295927 GGT6Q6P531 493 aa32.51■■■□□ 2.8
PTX3-201ENST00000295927 COL17A1Q9UMD9 1497 aaPredicted RBP32.51■■■□□ 2.79
PTX3-201ENST00000295927 TRPM2O94759 1503 aa32.51■■■□□ 2.79
PTX3-201ENST00000295927 PTPRTO14522 1441 aa32.51■■■□□ 2.79
PTX3-201ENST00000295927 HIRIP3Q9BW71 556 aaPredicted RBP32.43■■■□□ 2.78
PTX3-201ENST00000295927 UHRF1BP1Q6BDS2 1440 aa32.43■■■□□ 2.78
PTX3-201ENST00000295927 ABCC3O15438 1527 aa32.43■■■□□ 2.78
PTX3-201ENST00000295927 REREQ9P2R6 1566 aa32.42■■■□□ 2.78
PTX3-201ENST00000295927 CLTCL1P53675 1640 aa32.41■■■□□ 2.78
PTX3-201ENST00000295927 DCAF11Q8TEB1 546 aa32.41■■■□□ 2.78
PTX3-201ENST00000295927 WASHC2CQ9Y4E1 1318 aa32.4■■■□□ 2.78
PTX3-201ENST00000295927 RGL3Q3MIN7 710 aa32.39■■■□□ 2.78
PTX3-201ENST00000295927 ZNF326Q5BKZ1 582 aaKnown RBP32.39■■■□□ 2.78
PTX3-201ENST00000295927 DNAJC5Q9H3Z4 198 aa32.39■■■□□ 2.78
PTX3-201ENST00000295927 KDM2AQ9Y2K7 1162 aa32.38■■■□□ 2.77
PTX3-201ENST00000295927 CAMSAP1Q5T5Y3 1602 aa32.37■■■□□ 2.77
PTX3-201ENST00000295927 ZC3H13Q5T200 1668 aaKnown RBP32.36■■■□□ 2.77
PTX3-201ENST00000295927 SPATA31E1Q6ZUB1 1445 aa32.36■■■□□ 2.77
PTX3-201ENST00000295927 ARHGEF40Q8TER5 1519 aa32.35■■■□□ 2.77
PTX3-201ENST00000295927 NPATQ14207 1427 aa32.35■■■□□ 2.77
PTX3-201ENST00000295927 HSPA5P11021 654 aaKnown RBP32.34■■■□□ 2.77
PTX3-201ENST00000295927 EIF4G2P78344 907 aaKnown RBP eCLIP32.34■■■□□ 2.77
PTX3-201ENST00000295927 AGLP35573 1532 aa32.33■■■□□ 2.77
PTX3-201ENST00000295927 CFAP65Q6ZU64 1925 aaKnown RBP32.32■■■□□ 2.76
PTX3-201ENST00000295927 RALGAPBQ86X10 1494 aa32.31■■■□□ 2.76
PTX3-201ENST00000295927 SIGLEC1Q9BZZ2 1709 aa32.3■■■□□ 2.76
PTX3-201ENST00000295927 UGGT1Q9NYU2 1555 aa32.29■■■□□ 2.76
PTX3-201ENST00000295927 TRHP20396 242 aaPredicted RBP32.28■■■□□ 2.76
PTX3-201ENST00000295927 PRAG1Q86YV5 1406 aa32.27■■■□□ 2.76
PTX3-201ENST00000295927 KIF1BO60333 1816 aa32.26■■■□□ 2.76
PTX3-201ENST00000295927 NEURL4Q96JN8 1562 aa32.25■■■□□ 2.75
PTX3-201ENST00000295927 ARHGAP31Q2M1Z3 1444 aa32.23■■■□□ 2.75
PTX3-201ENST00000295927 TRPM1Q7Z4N2 1603 aa32.23■■■□□ 2.75
PTX3-201ENST00000295927 CNTLNQ9NXG0 1405 aa32.22■■■□□ 2.75
PTX3-201ENST00000295927 NOS1P29475 1434 aa32.19■■■□□ 2.74
PTX3-201ENST00000295927 MIER1Q8N108 512 aa32.17■■■□□ 2.74
PTX3-201ENST00000295927 MROH2AA6NES4 1674 aa32.16■■■□□ 2.74
PTX3-201ENST00000295927 DDX10Q13206 875 aaKnown RBP32.16■■■□□ 2.74
PTX3-201ENST00000295927 PPP6R1Q9UPN7 881 aa32.16■■■□□ 2.74
PTX3-201ENST00000295927 USP47Q96K76 1375 aa32.15■■■□□ 2.74
PTX3-201ENST00000295927 CARD11Q9BXL7 1154 aa32.14■■■□□ 2.74
PTX3-201ENST00000295927 SYNMO15061 1565 aa32.14■■■□□ 2.74
PTX3-201ENST00000295927 ROCK2O75116 1388 aaKnown RBP32.13■■■□□ 2.73
PTX3-201ENST00000295927 MADDQ8WXG6 1647 aa32.12■■■□□ 2.73
PTX3-201ENST00000295927 ADGRB3O60242 1522 aa32.12■■■□□ 2.73
PTX3-201ENST00000295927 STAC3Q96MF2 364 aa32.12■■■□□ 2.73
PTX3-201ENST00000295927 CLTCQ00610 1675 aaKnown RBP32.12■■■□□ 2.73
PTX3-201ENST00000295927 PIK3C2BO00750 1634 aa32.11■■■□□ 2.73
PTX3-201ENST00000295927 PREX1Q8TCU6 1659 aa32.11■■■□□ 2.73
PTX3-201ENST00000295927 IFT172Q9UG01 1749 aa32.09■■■□□ 2.73
PTX3-201ENST00000295927 MLECQ14165 292 aa32.08■■■□□ 2.73
PTX3-201ENST00000295927 WASHC2AQ641Q2 1341 aa32.07■■■□□ 2.72
PTX3-201ENST00000295927 POLR1AO95602 1720 aaPredicted RBP32.06■■■□□ 2.72
PTX3-201ENST00000295927 GPRASP1Q5JY77 1395 aa32.06■■■□□ 2.72
PTX3-201ENST00000295927 LAMC1P11047 1609 aa32.06■■■□□ 2.72
PTX3-201ENST00000295927 NBPF1Q3BBV0 1214 aa32.06■■■□□ 2.72
PTX3-201ENST00000295927 C11orf95C9JLR9 678 aaPredicted RBP32.04■■■□□ 2.72
PTX3-201ENST00000295927 CHGAP10645 457 aaKnown RBP32.04■■■□□ 2.72
PTX3-201ENST00000295927 MYOM2P54296 1465 aa32.02■■■□□ 2.72
PTX3-201ENST00000295927 CCDC7Q96M83 1385 aa31.99■■■□□ 2.71
PTX3-201ENST00000295927 ARID4BQ4LE39 1312 aaPredicted RBP31.99■■■□□ 2.71
PTX3-201ENST00000295927 ERVK-7P63135 1459 aa31.99■■■□□ 2.71
PTX3-201ENST00000295927 PPLO60437 1756 aa31.98■■■□□ 2.71
PTX3-201ENST00000295927 FBXO31Q5XUX0 539 aaPredicted RBP31.98■■■□□ 2.71
PTX3-201ENST00000295927 SLC52A1Q9NWF4 448 aa31.98■■■□□ 2.71
PTX3-201ENST00000295927 IDI1Q13907 227 aa31.96■■■□□ 2.71
PTX3-201ENST00000295927 KIAA1210Q9ULL0 1709 aa31.96■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 646.5 ms