RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 SAMD9LQ8IVG5 1584 aa26.45■■□□□ 1.82
NKX6-1-201ENST00000295886 NBPF1Q3BBV0 1214 aa26.44■■□□□ 1.82
NKX6-1-201ENST00000295886 SALL2Q9Y467 1007 aaPredicted RBP26.43■■□□□ 1.82
NKX6-1-201ENST00000295886 CCDC141Q6ZP82 1450 aa26.43■■□□□ 1.82
NKX6-1-201ENST00000295886 FAM135AQ9P2D6 1515 aa26.42■■□□□ 1.82
NKX6-1-201ENST00000295886 ARHGEF5Q12774 1597 aa26.4■■□□□ 1.82
NKX6-1-201ENST00000295886 CDC42BPBQ9Y5S2 1711 aa26.4■■□□□ 1.82
NKX6-1-201ENST00000295886 CCDC144AA2RUR9 1427 aa26.38■■□□□ 1.81
NKX6-1-201ENST00000295886 SYCP2Q9BX26 1530 aa26.37■■□□□ 1.81
NKX6-1-201ENST00000295886 MYBBP1AQ9BQG0 1328 aaKnown RBP26.37■■□□□ 1.81
NKX6-1-201ENST00000295886 ERICH6Q7L0X2 663 aa26.35■■□□□ 1.81
NKX6-1-201ENST00000295886 CCDC136Q96JN2 1154 aa26.35■■□□□ 1.81
NKX6-1-201ENST00000295886 PREX2Q70Z35 1606 aa26.33■■□□□ 1.81
NKX6-1-201ENST00000295886 PRAG1Q86YV5 1406 aa26.33■■□□□ 1.81
NKX6-1-201ENST00000295886 ARHGAP5Q13017 1502 aa26.33■■□□□ 1.81
NKX6-1-201ENST00000295886 RNF123Q5XPI4 1314 aa26.33■■□□□ 1.81
NKX6-1-201ENST00000295886 PLA2R1Q13018 1463 aa26.32■■□□□ 1.8
NKX6-1-201ENST00000295886 RALBP1Q15311 655 aa26.31■■□□□ 1.8
NKX6-1-201ENST00000295886 TTC37Q6PGP7 1564 aa26.31■■□□□ 1.8
NKX6-1-201ENST00000295886 LRPPRCP42704 1394 aaKnown RBP26.31■■□□□ 1.8
NKX6-1-201ENST00000295886 BRD4O60885 1362 aaPredicted RBP26.3■■□□□ 1.8
NKX6-1-201ENST00000295886 RSPH4AQ5TD94 716 aa26.29■■□□□ 1.8
NKX6-1-201ENST00000295886 PLEKHH2Q8IVE3 1493 aa26.28■■□□□ 1.8
NKX6-1-201ENST00000295886 CC2D1BQ5T0F9 858 aaKnown RBP26.28■■□□□ 1.8
NKX6-1-201ENST00000295886 A2MP01023 1474 aa26.26■■□□□ 1.79
NKX6-1-201ENST00000295886 TRPM1Q7Z4N2 1603 aa26.25■■□□□ 1.79
NKX6-1-201ENST00000295886 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.25■■□□□ 1.79
NKX6-1-201ENST00000295886 E9PCH4 1651 aa26.24■■□□□ 1.79
NKX6-1-201ENST00000295886 DISP3Q9P2K9 1392 aa26.24■■□□□ 1.79
NKX6-1-201ENST00000295886 KTN1Q86UP2 1357 aaKnown RBP26.24■■□□□ 1.79
NKX6-1-201ENST00000295886 ERCC6L2Q5T890 1561 aa26.23■■□□□ 1.79
NKX6-1-201ENST00000295886 PER1O15534 1290 aaPredicted RBP26.23■■□□□ 1.79
NKX6-1-201ENST00000295886 NLRP13Q86W25 1043 aa26.23■■□□□ 1.79
NKX6-1-201ENST00000295886 TESK2Q96S53 571 aa26.2■■□□□ 1.79
NKX6-1-201ENST00000295886 PARD3Q8TEW0 1356 aa26.2■■□□□ 1.78
NKX6-1-201ENST00000295886 CHD1O14646 1710 aa26.2■■□□□ 1.78
NKX6-1-201ENST00000295886 PANK3Q9H999 370 aa26.18■■□□□ 1.78
NKX6-1-201ENST00000295886 CDCA7LQ96GN5 454 aa26.18■■□□□ 1.78
NKX6-1-201ENST00000295886 UNC13BO14795 1591 aa26.17■■□□□ 1.78
NKX6-1-201ENST00000295886 RRP1P56182 461 aaKnown RBP26.16■■□□□ 1.78
NKX6-1-201ENST00000295886 EXOC6Q8TAG9 804 aa26.16■■□□□ 1.78
NKX6-1-201ENST00000295886 GPRASP1Q5JY77 1395 aa26.15■■□□□ 1.78
NKX6-1-201ENST00000295886 RCAN3Q9UKA8 241 aa26.15■■□□□ 1.78
NKX6-1-201ENST00000295886 COL17A1Q9UMD9 1497 aaPredicted RBP26.13■■□□□ 1.77
NKX6-1-201ENST00000295886 MAST1Q9Y2H9 1570 aa26.12■■□□□ 1.77
NKX6-1-201ENST00000295886 ERBINQ96RT1 1412 aa26.11■■□□□ 1.77
NKX6-1-201ENST00000295886 PAK3O75914 559 aaPredicted RBP26.1■■□□□ 1.77
NKX6-1-201ENST00000295886 IQGAP3Q86VI3 1631 aa26.09■■□□□ 1.77
NKX6-1-201ENST00000295886 MYO5CQ9NQX4 1742 aa26.09■■□□□ 1.77
NKX6-1-201ENST00000295886 PRDM15P57071 1507 aaPredicted RBP26.09■■□□□ 1.77
NKX6-1-201ENST00000295886 ABCC2Q92887 1545 aa26.08■■□□□ 1.77
NKX6-1-201ENST00000295886 TMF1P82094 1093 aa26.08■■□□□ 1.77
NKX6-1-201ENST00000295886 PLXNC1O60486 1568 aa26.07■■□□□ 1.76
NKX6-1-201ENST00000295886 DUOX2Q9NRD8 1548 aa26.06■■□□□ 1.76
NKX6-1-201ENST00000295886 PLIN1O60240 522 aa26.06■■□□□ 1.76
NKX6-1-201ENST00000295886 TRAPPC8Q9Y2L5 1435 aa26.06■■□□□ 1.76
NKX6-1-201ENST00000295886 EFCAB2Q5VUJ9 269 aa26.04■■□□□ 1.76
NKX6-1-201ENST00000295886 NOP58Q9Y2X3 529 aaKnown RBP26.04■■□□□ 1.76
NKX6-1-201ENST00000295886 AFAP1Q8N556 730 aa26.04■■□□□ 1.76
NKX6-1-201ENST00000295886 SHROOM2Q13796 1616 aa26.03■■□□□ 1.76
NKX6-1-201ENST00000295886 PLCH2O75038 1416 aa26.01■■□□□ 1.76
NKX6-1-201ENST00000295886 PDE3BQ13370 1112 aa25.99■■□□□ 1.75
NKX6-1-201ENST00000295886 NBR1Q14596 966 aa25.99■■□□□ 1.75
NKX6-1-201ENST00000295886 MAGI2Q86UL8 1455 aa25.98■■□□□ 1.75
NKX6-1-201ENST00000295886 EIF2AK4Q9P2K8 1649 aaKnown RBP25.97■■□□□ 1.75
NKX6-1-201ENST00000295886 ADAMTS8Q9UP79 889 aa25.97■■□□□ 1.75
NKX6-1-201ENST00000295886 LAMC1P11047 1609 aa25.97■■□□□ 1.75
NKX6-1-201ENST00000295886 ATP10AO60312 1499 aa25.97■■□□□ 1.75
NKX6-1-201ENST00000295886 WASHC2CQ9Y4E1 1318 aa25.97■■□□□ 1.75
NKX6-1-201ENST00000295886 SPAG9O60271 1321 aaKnown RBP25.96■■□□□ 1.75
NKX6-1-201ENST00000295886 ANP32AP39687 249 aaKnown RBP25.96■■□□□ 1.75
NKX6-1-201ENST00000295886 SKAP1Q86WV1 359 aa25.94■■□□□ 1.74
NKX6-1-201ENST00000295886 ZCCHC11Q5TAX3 1644 aaKnown RBP25.94■■□□□ 1.74
NKX6-1-201ENST00000295886 NPM2Q86SE8 214 aaKnown RBP25.94■■□□□ 1.74
NKX6-1-201ENST00000295886 BLMP54132 1417 aaPredicted RBP25.93■■□□□ 1.74
NKX6-1-201ENST00000295886 KNSTRNQ9Y448 316 aa25.92■■□□□ 1.74
NKX6-1-201ENST00000295886 ABCC1P33527 1531 aa25.92■■□□□ 1.74
NKX6-1-201ENST00000295886 MYT1LQ9UL68 1186 aa25.91■■□□□ 1.74
NKX6-1-201ENST00000295886 IPO9Q96P70 1041 aaKnown RBP25.91■■□□□ 1.74
NKX6-1-201ENST00000295886 WDR7Q9Y4E6 1490 aa25.9■■□□□ 1.74
NKX6-1-201ENST00000295886 CRBNQ96SW2 442 aa25.89■■□□□ 1.74
NKX6-1-201ENST00000295886 PPP2R1AP30153 589 aa25.89■■□□□ 1.73
NKX6-1-201ENST00000295886 RNF17Q9BXT8 1623 aaKnown RBP25.88■■□□□ 1.73
NKX6-1-201ENST00000295886 DEKP35659 375 aaKnown RBP25.87■■□□□ 1.73
NKX6-1-201ENST00000295886 C20orf194Q5TEA3 1177 aa25.87■■□□□ 1.73
NKX6-1-201ENST00000295886 MADDQ8WXG6 1647 aa25.86■■□□□ 1.73
NKX6-1-201ENST00000295886 AMER1Q5JTC6 1135 aaPredicted RBP25.85■■□□□ 1.73
NKX6-1-201ENST00000295886 WDR43Q15061 677 aaKnown RBP eCLIP25.84■■□□□ 1.73
NKX6-1-201ENST00000295886 ZBTB47Q9UFB7 747 aaPredicted RBP25.84■■□□□ 1.73
NKX6-1-201ENST00000295886 KIF3BO15066 747 aa25.83■■□□□ 1.72
NKX6-1-201ENST00000295886 PLEKHH1Q9ULM0 1364 aa25.83■■□□□ 1.72
NKX6-1-201ENST00000295886 PDE4AP27815 886 aa25.82■■□□□ 1.72
NKX6-1-201ENST00000295886 TCERG1O14776 1098 aaKnown RBP25.81■■□□□ 1.72
NKX6-1-201ENST00000295886 ZMYM4Q5VZL5 1548 aa25.8■■□□□ 1.72
NKX6-1-201ENST00000295886 CLTCL1P53675 1640 aa25.8■■□□□ 1.72
NKX6-1-201ENST00000295886 ZFYVE16Q7Z3T8 1539 aa25.8■■□□□ 1.72
NKX6-1-201ENST00000295886 CCDC146Q8IYE0 955 aa25.8■■□□□ 1.72
NKX6-1-201ENST00000295886 TRPM2O94759 1503 aa25.79■■□□□ 1.72
NKX6-1-201ENST00000295886 SCAF11Q99590 1463 aaKnown RBP25.79■■□□□ 1.72
NKX6-1-201ENST00000295886 CFAP70Q5T0N1 1121 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms