RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 DHX29Q7Z478 1369 aaKnown RBP21.6■■□□□ 1.05
NCKIPSD-201ENST00000294129 NBPF1Q3BBV0 1214 aa21.6■■□□□ 1.05
NCKIPSD-201ENST00000294129 MYT1LQ9UL68 1186 aa21.59■■□□□ 1.05
NCKIPSD-201ENST00000294129 MYO5CQ9NQX4 1742 aa21.59■■□□□ 1.05
NCKIPSD-201ENST00000294129 EFCAB2Q5VUJ9 269 aa21.59■■□□□ 1.05
NCKIPSD-201ENST00000294129 UHRF1BP1Q6BDS2 1440 aa21.58■■□□□ 1.05
NCKIPSD-201ENST00000294129 ARHGEF12Q9NZN5 1544 aa21.58■■□□□ 1.04
NCKIPSD-201ENST00000294129 AFAP1Q8N556 730 aa21.56■■□□□ 1.04
NCKIPSD-201ENST00000294129 ZCCHC11Q5TAX3 1644 aaKnown RBP21.54■■□□□ 1.04
NCKIPSD-201ENST00000294129 TMC1Q8TDI8 760 aa21.53■■□□□ 1.04
NCKIPSD-201ENST00000294129 ZBED9Q6R2W3 1325 aa21.52■■□□□ 1.04
NCKIPSD-201ENST00000294129 TRAPPC8Q9Y2L5 1435 aa21.52■■□□□ 1.04
NCKIPSD-201ENST00000294129 PLA2R1Q13018 1463 aa21.52■■□□□ 1.03
NCKIPSD-201ENST00000294129 PLCH2O75038 1416 aa21.51■■□□□ 1.03
NCKIPSD-201ENST00000294129 SPAG9O60271 1321 aaKnown RBP21.49■■□□□ 1.03
NCKIPSD-201ENST00000294129 PRAG1Q86YV5 1406 aa21.48■■□□□ 1.03
NCKIPSD-201ENST00000294129 ARID4BQ4LE39 1312 aaPredicted RBP21.47■■□□□ 1.03
NCKIPSD-201ENST00000294129 MAST1Q9Y2H9 1570 aa21.46■■□□□ 1.03
NCKIPSD-201ENST00000294129 A2MP01023 1474 aa21.46■■□□□ 1.03
NCKIPSD-201ENST00000294129 CLASP1Q7Z460 1538 aa21.46■■□□□ 1.03
NCKIPSD-201ENST00000294129 UNC13BO14795 1591 aa21.45■■□□□ 1.03
NCKIPSD-201ENST00000294129 DUOX2Q9NRD8 1548 aa21.45■■□□□ 1.02
NCKIPSD-201ENST00000294129 SALL2Q9Y467 1007 aaPredicted RBP21.44■■□□□ 1.02
NCKIPSD-201ENST00000294129 PLXNC1O60486 1568 aa21.43■■□□□ 1.02
NCKIPSD-201ENST00000294129 PNISRQ8TF01 805 aaKnown RBP21.41■■□□□ 1.02
NCKIPSD-201ENST00000294129 ABCC1P33527 1531 aa21.41■■□□□ 1.02
NCKIPSD-201ENST00000294129 IQGAP3Q86VI3 1631 aa21.4■■□□□ 1.02
NCKIPSD-201ENST00000294129 CC2D1BQ5T0F9 858 aaKnown RBP21.4■■□□□ 1.02
NCKIPSD-201ENST00000294129 B4GALNT3Q6L9W6 998 aa21.4■■□□□ 1.02
NCKIPSD-201ENST00000294129 ERBINQ96RT1 1412 aa21.39■■□□□ 1.02
NCKIPSD-201ENST00000294129 TRPM1Q7Z4N2 1603 aa21.39■■□□□ 1.02
NCKIPSD-201ENST00000294129 RBM19Q9Y4C8 960 aaKnown RBP21.39■■□□□ 1.01
NCKIPSD-201ENST00000294129 UHRF1BP1LA0JNW5 1464 aa21.38■■□□□ 1.01
NCKIPSD-201ENST00000294129 ANP32EQ9BTT0 268 aa21.37■■□□□ 1.01
NCKIPSD-201ENST00000294129 KIF3BO15066 747 aa21.37■■□□□ 1.01
NCKIPSD-201ENST00000294129 DISP3Q9P2K9 1392 aa21.36■■□□□ 1.01
NCKIPSD-201ENST00000294129 MYBBP1AQ9BQG0 1328 aaKnown RBP21.36■■□□□ 1.01
NCKIPSD-201ENST00000294129 PPP4R2Q9NY27 417 aa21.34■■□□□ 1.01
NCKIPSD-201ENST00000294129 TESK2Q96S53 571 aa21.33■■□□□ 1.01
NCKIPSD-201ENST00000294129 RALBP1Q15311 655 aa21.33■■□□□ 1.01
NCKIPSD-201ENST00000294129 SCAPERQ9BY12 1400 aa21.33■■□□□ 1
NCKIPSD-201ENST00000294129 PANK3Q9H999 370 aa21.33■■□□□ 1
NCKIPSD-201ENST00000294129 FANCAO15360 1455 aa21.32■■□□□ 1
NCKIPSD-201ENST00000294129 KTN1Q86UP2 1357 aaKnown RBP21.32■■□□□ 1
NCKIPSD-201ENST00000294129 WDR7Q9Y4E6 1490 aa21.32■■□□□ 1
NCKIPSD-201ENST00000294129 NUDCQ9Y266 331 aa21.31■■□□□ 1
NCKIPSD-201ENST00000294129 TMF1P82094 1093 aa21.3■■□□□ 1
NCKIPSD-201ENST00000294129 MAGI2Q86UL8 1455 aa21.29■■□□□ 1
NCKIPSD-201ENST00000294129 GPRASP1Q5JY77 1395 aa21.28■■□□□ 1
NCKIPSD-201ENST00000294129 ZFYVE16Q7Z3T8 1539 aa21.28■■□□□ 1
NCKIPSD-201ENST00000294129 BRD4O60885 1362 aaPredicted RBP21.27■■□□□ 1
NCKIPSD-201ENST00000294129 NLRP13Q86W25 1043 aa21.27■□□□□ 0.99
NCKIPSD-201ENST00000294129 E9PCH4 1651 aa21.26■□□□□ 0.99
NCKIPSD-201ENST00000294129 SMG6Q86US8 1419 aaKnown RBP21.26■□□□□ 0.99
NCKIPSD-201ENST00000294129 PER1O15534 1290 aaPredicted RBP21.26■□□□□ 0.99
NCKIPSD-201ENST00000294129 ADGRL1O94910 1474 aa21.26■□□□□ 0.99
NCKIPSD-201ENST00000294129 COL17A1Q9UMD9 1497 aaPredicted RBP21.25■□□□□ 0.99
NCKIPSD-201ENST00000294129 PRDM15P57071 1507 aaPredicted RBP21.25■□□□□ 0.99
NCKIPSD-201ENST00000294129 ATP10AO60312 1499 aa21.24■□□□□ 0.99
NCKIPSD-201ENST00000294129 KANK1Q14678 1352 aa21.24■□□□□ 0.99
NCKIPSD-201ENST00000294129 ASXL2Q76L83 1435 aa21.24■□□□□ 0.99
NCKIPSD-201ENST00000294129 NPM1P06748 294 aaKnown RBP eCLIP21.23■□□□□ 0.99
NCKIPSD-201ENST00000294129 ATP7AQ04656 1500 aa21.22■□□□□ 0.99
NCKIPSD-201ENST00000294129 CHGAP10645 457 aaKnown RBP21.22■□□□□ 0.99
NCKIPSD-201ENST00000294129 ERICH6BQ5W0A0 696 aa21.22■□□□□ 0.99
NCKIPSD-201ENST00000294129 EIF2AK4Q9P2K8 1649 aaKnown RBP21.22■□□□□ 0.99
NCKIPSD-201ENST00000294129 RTEL1-TNFRSF6BF6WH68 1400 aa21.22■□□□□ 0.99
NCKIPSD-201ENST00000294129 PARD3Q8TEW0 1356 aa21.21■□□□□ 0.99
NCKIPSD-201ENST00000294129 LRPPRCP42704 1394 aaKnown RBP21.2■□□□□ 0.98
NCKIPSD-201ENST00000294129 CLTCL1P53675 1640 aa21.17■□□□□ 0.98
NCKIPSD-201ENST00000294129 UGGT1Q9NYU2 1555 aa21.17■□□□□ 0.98
NCKIPSD-201ENST00000294129 CFAP70Q5T0N1 1121 aa21.16■□□□□ 0.98
NCKIPSD-201ENST00000294129 GGT6Q6P531 493 aa21.16■□□□□ 0.98
NCKIPSD-201ENST00000294129 SPHKAPQ2M3C7 1700 aa21.16■□□□□ 0.98
NCKIPSD-201ENST00000294129 TRPM2O94759 1503 aa21.15■□□□□ 0.98
NCKIPSD-201ENST00000294129 CCDC136Q96JN2 1154 aa21.15■□□□□ 0.98
NCKIPSD-201ENST00000294129 KNSTRNQ9Y448 316 aa21.15■□□□□ 0.98
NCKIPSD-201ENST00000294129 ABCA9Q8IUA7 1624 aa21.15■□□□□ 0.98
NCKIPSD-201ENST00000294129 CFAP65Q6ZU64 1925 aaKnown RBP21.15■□□□□ 0.98
NCKIPSD-201ENST00000294129 CDCA7LQ96GN5 454 aa21.15■□□□□ 0.98
NCKIPSD-201ENST00000294129 ARAP3Q8WWN8 1544 aa21.14■□□□□ 0.98
NCKIPSD-201ENST00000294129 OSCARQ8IYS5 282 aa21.14■□□□□ 0.97
NCKIPSD-201ENST00000294129 MADDQ8WXG6 1647 aa21.13■□□□□ 0.97
NCKIPSD-201ENST00000294129 LAMC1P11047 1609 aa21.13■□□□□ 0.97
NCKIPSD-201ENST00000294129 SENP3Q9H4L4 574 aaPredicted RBP21.13■□□□□ 0.97
NCKIPSD-201ENST00000294129 INO80Q9ULG1 1556 aaPredicted RBP21.13■□□□□ 0.97
NCKIPSD-201ENST00000294129 ADGRF5Q8IZF2 1346 aa21.12■□□□□ 0.97
NCKIPSD-201ENST00000294129 PTPRTO14522 1441 aa21.11■□□□□ 0.97
NCKIPSD-201ENST00000294129 TET3O43151 1660 aa21.1■□□□□ 0.97
NCKIPSD-201ENST00000294129 RNF17Q9BXT8 1623 aaKnown RBP21.1■□□□□ 0.97
NCKIPSD-201ENST00000294129 CEP152O94986 1710 aa21.1■□□□□ 0.97
NCKIPSD-201ENST00000294129 DEPDC5O75140 1603 aa21.08■□□□□ 0.97
NCKIPSD-201ENST00000294129 SCAF11Q99590 1463 aaKnown RBP21.08■□□□□ 0.96
NCKIPSD-201ENST00000294129 RCAN3Q9UKA8 241 aa21.08■□□□□ 0.96
NCKIPSD-201ENST00000294129 WASHC2CQ9Y4E1 1318 aa21.07■□□□□ 0.96
NCKIPSD-201ENST00000294129 ADAMTS8Q9UP79 889 aa21.06■□□□□ 0.96
NCKIPSD-201ENST00000294129 RNF123Q5XPI4 1314 aa21.06■□□□□ 0.96
NCKIPSD-201ENST00000294129 NUTM2DQ5VT03 806 aaPredicted RBP21.06■□□□□ 0.96
NCKIPSD-201ENST00000294129 CD109Q6YHK3 1445 aa21.05■□□□□ 0.96
NCKIPSD-201ENST00000294129 RAPGEF3O95398 923 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms