RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 RSPH4AQ5TD94 716 aa13.53□□□□□ -0.24
PKNOX1-201ENST00000291547 NOC3LQ8WTT2 800 aaKnown RBP13.53□□□□□ -0.24
PKNOX1-201ENST00000291547 POGKQ9P215 609 aa13.53□□□□□ -0.24
PKNOX1-201ENST00000291547 ANKRD30AQ9BXX3 1397 aa13.53□□□□□ -0.24
PKNOX1-201ENST00000291547 APBB1O00213 710 aa13.52□□□□□ -0.24
PKNOX1-201ENST00000291547 LMOD2Q6P5Q4 547 aa13.52□□□□□ -0.24
PKNOX1-201ENST00000291547 RAB3GAP2Q9H2M9 1393 aa13.52□□□□□ -0.24
PKNOX1-201ENST00000291547 TCERG1O14776 1098 aaKnown RBP13.52□□□□□ -0.24
PKNOX1-201ENST00000291547 SYAP1Q96A49 352 aaPredicted RBP13.52□□□□□ -0.24
PKNOX1-201ENST00000291547 HECW1Q76N89 1606 aa13.51□□□□□ -0.25
PKNOX1-201ENST00000291547 KIAA1211Q6ZU35 1233 aa13.51□□□□□ -0.25
PKNOX1-201ENST00000291547 EIF4G3O43432 1585 aaKnown RBP13.5□□□□□ -0.25
PKNOX1-201ENST00000291547 MYOM3Q5VTT5 1437 aa13.5□□□□□ -0.25
PKNOX1-201ENST00000291547 PHLDB1Q86UU1 1377 aa13.5□□□□□ -0.25
PKNOX1-201ENST00000291547 ADAMTS12P58397 1594 aa13.49□□□□□ -0.25
PKNOX1-201ENST00000291547 GOLGA6L1Q8N7Z2 621 aa13.49□□□□□ -0.25
PKNOX1-201ENST00000291547 NCOA2Q15596 1464 aa13.49□□□□□ -0.25
PKNOX1-201ENST00000291547 FGD6Q6ZV73 1430 aa13.49□□□□□ -0.25
PKNOX1-201ENST00000291547 TIAM1Q13009 1591 aa13.48□□□□□ -0.25
PKNOX1-201ENST00000291547 HTATSF1O43719 755 aaKnown RBP13.48□□□□□ -0.25
PKNOX1-201ENST00000291547 GSE1Q14687 1217 aa13.48□□□□□ -0.25
PKNOX1-201ENST00000291547 TMF1P82094 1093 aa13.47□□□□□ -0.25
PKNOX1-201ENST00000291547 CALD1Q05682 793 aaKnown RBP13.47□□□□□ -0.25
PKNOX1-201ENST00000291547 ISY1Q9ULR0 285 aaKnown RBP13.47□□□□□ -0.25
PKNOX1-201ENST00000291547 ABCA5Q8WWZ7 1642 aa13.46□□□□□ -0.25
PKNOX1-201ENST00000291547 RWDD1Q9H446 243 aaPredicted RBP13.46□□□□□ -0.25
PKNOX1-201ENST00000291547 RCAN3Q9UKA8 241 aa13.46□□□□□ -0.25
PKNOX1-201ENST00000291547 KANK1Q14678 1352 aa13.46□□□□□ -0.25
PKNOX1-201ENST00000291547 EHBP1L1Q8N3D4 1523 aa13.46□□□□□ -0.25
PKNOX1-201ENST00000291547 PCF11O94913 1555 aaKnown RBP13.46□□□□□ -0.25
PKNOX1-201ENST00000291547 IPO8O15397 1037 aaKnown RBP13.46□□□□□ -0.26
PKNOX1-201ENST00000291547 SPAG9O60271 1321 aaKnown RBP13.46□□□□□ -0.26
PKNOX1-201ENST00000291547 FAM43AQ8N2R8 423 aa13.45□□□□□ -0.26
PKNOX1-201ENST00000291547 MFAP1P55081 439 aaKnown RBP13.45□□□□□ -0.26
PKNOX1-201ENST00000291547 TPM4P67936 248 aa13.45□□□□□ -0.26
PKNOX1-201ENST00000291547 A0A0U1RQG5 324 aaPredicted RBP13.44□□□□□ -0.26
PKNOX1-201ENST00000291547 UACAQ9BZF9 1416 aa13.44□□□□□ -0.26
PKNOX1-201ENST00000291547 EPRSP07814 1512 aaKnown RBP13.44□□□□□ -0.26
PKNOX1-201ENST00000291547 IL27Q8NEV9 243 aa13.44□□□□□ -0.26
PKNOX1-201ENST00000291547 MORC1Q86VD1 984 aa13.44□□□□□ -0.26
PKNOX1-201ENST00000291547 PBRM1Q86U86 1689 aa13.43□□□□□ -0.26
PKNOX1-201ENST00000291547 TARBP1Q13395 1621 aaKnown RBP13.43□□□□□ -0.26
PKNOX1-201ENST00000291547 TROQ12816 1431 aaPredicted RBP13.43□□□□□ -0.26
PKNOX1-201ENST00000291547 CTTNBP2Q8WZ74 1663 aa13.43□□□□□ -0.26
PKNOX1-201ENST00000291547 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
PKNOX1-201ENST00000291547 DCAF11Q8TEB1 546 aa13.42□□□□□ -0.26
PKNOX1-201ENST00000291547 NUP155O75694 1391 aa13.42□□□□□ -0.26
PKNOX1-201ENST00000291547 CDK13Q14004 1512 aaKnown RBP13.42□□□□□ -0.26
PKNOX1-201ENST00000291547 SOX12O15370 315 aa13.41□□□□□ -0.26
PKNOX1-201ENST00000291547 ITPRIPQ8IWB1 547 aa13.41□□□□□ -0.26
PKNOX1-201ENST00000291547 ZNF644Q9H582 1327 aaPredicted RBP13.41□□□□□ -0.26
PKNOX1-201ENST00000291547 MPHOSPH9Q99550 1183 aa13.41□□□□□ -0.26
PKNOX1-201ENST00000291547 PLB1Q6P1J6 1458 aa13.41□□□□□ -0.26
PKNOX1-201ENST00000291547 RRP9O43818 475 aaKnown RBP13.41□□□□□ -0.26
PKNOX1-201ENST00000291547 PKD2Q13563 968 aa13.41□□□□□ -0.26
PKNOX1-201ENST00000291547 TIMELESSQ9UNS1 1208 aa13.41□□□□□ -0.26
PKNOX1-201ENST00000291547 MSH5O43196 834 aa13.4□□□□□ -0.26
PKNOX1-201ENST00000291547 RRBP1Q9P2E9 1410 aaKnown RBP13.4□□□□□ -0.26
PKNOX1-201ENST00000291547 GGT6Q6P531 493 aa13.4□□□□□ -0.26
PKNOX1-201ENST00000291547 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
PKNOX1-201ENST00000291547 PDE4CQ08493 712 aa13.39□□□□□ -0.27
PKNOX1-201ENST00000291547 CCDC34Q96HJ3 373 aa13.39□□□□□ -0.27
PKNOX1-201ENST00000291547 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
PKNOX1-201ENST00000291547 HSPA5P11021 654 aaKnown RBP13.38□□□□□ -0.27
PKNOX1-201ENST00000291547 MAP3K1Q13233 1512 aa13.38□□□□□ -0.27
PKNOX1-201ENST00000291547 HSP90B1P14625 803 aaKnown RBP13.38□□□□□ -0.27
PKNOX1-201ENST00000291547 FOXD1Q16676 465 aa13.37□□□□□ -0.27
PKNOX1-201ENST00000291547 KIF3BO15066 747 aa13.37□□□□□ -0.27
PKNOX1-201ENST00000291547 PMFBP1Q8TBY8 1022 aa13.37□□□□□ -0.27
PKNOX1-201ENST00000291547 SUPT6HQ7KZ85 1726 aaKnown RBP13.37□□□□□ -0.27
PKNOX1-201ENST00000291547 SRPK2P78362 688 aaKnown RBP13.37□□□□□ -0.27
PKNOX1-201ENST00000291547 TPM3P06753 285 aa13.36□□□□□ -0.27
PKNOX1-201ENST00000291547 FAM69CQ0P6D2 419 aa13.36□□□□□ -0.27
PKNOX1-201ENST00000291547 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
PKNOX1-201ENST00000291547 MLECQ14165 292 aa13.36□□□□□ -0.27
PKNOX1-201ENST00000291547 NOL8Q76FK4 1167 aaKnown RBP13.36□□□□□ -0.27
PKNOX1-201ENST00000291547 ARHGAP5Q13017 1502 aa13.36□□□□□ -0.27
PKNOX1-201ENST00000291547 UGGT2Q9NYU1 1516 aa13.36□□□□□ -0.27
PKNOX1-201ENST00000291547 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
PKNOX1-201ENST00000291547 MIA2Q96PC5 1412 aa13.35□□□□□ -0.27
PKNOX1-201ENST00000291547 THOC2Q8NI27 1593 aaKnown RBP13.35□□□□□ -0.27
PKNOX1-201ENST00000291547 PHF14O94880 888 aa13.35□□□□□ -0.27
PKNOX1-201ENST00000291547 U2AF1L5P0DN76 240 aaPredicted RBP13.35□□□□□ -0.27
PKNOX1-201ENST00000291547 U2AF1Q01081 240 aaKnown RBP eCLIP13.35□□□□□ -0.27
PKNOX1-201ENST00000291547 CREBRFQ8IUR6 639 aa13.35□□□□□ -0.27
PKNOX1-201ENST00000291547 SETQ01105 290 aaPredicted RBP13.34□□□□□ -0.27
PKNOX1-201ENST00000291547 NUP160Q12769 1436 aa13.34□□□□□ -0.27
PKNOX1-201ENST00000291547 TRIM6-TRIM34B2RNG4 842 aa13.33□□□□□ -0.27
PKNOX1-201ENST00000291547 DHX57Q6P158 1386 aaKnown RBP13.33□□□□□ -0.28
PKNOX1-201ENST00000291547 SAFB2Q14151 953 aaKnown RBP eCLIP13.33□□□□□ -0.28
PKNOX1-201ENST00000291547 DDX11L8A8MPP1 907 aa13.32□□□□□ -0.28
PKNOX1-201ENST00000291547 FOXD4L5Q5VV16 416 aaPredicted RBP13.32□□□□□ -0.28
PKNOX1-201ENST00000291547 FOXD4L4Q8WXT5 416 aaPredicted RBP13.32□□□□□ -0.28
PKNOX1-201ENST00000291547 CLUAP1Q96AJ1 413 aa13.32□□□□□ -0.28
PKNOX1-201ENST00000291547 RASSF8Q8NHQ8 419 aa13.32□□□□□ -0.28
PKNOX1-201ENST00000291547 PRM3Q9NNZ6 103 aa13.31□□□□□ -0.28
PKNOX1-201ENST00000291547 MAP7D2Q96T17 732 aa13.31□□□□□ -0.28
PKNOX1-201ENST00000291547 DDX49Q9Y6V7 483 aaKnown RBP13.31□□□□□ -0.28
PKNOX1-201ENST00000291547 KIAA0556O60303 1618 aa13.31□□□□□ -0.28
PKNOX1-201ENST00000291547 ZNF771Q7L3S4 317 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms